| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3006 |
|---|
| Symbol | |
|---|
| ID | 4623790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 3705901 |
|---|
| End bp | 3707532 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639798124 |
|---|
| Product | iron(III) ABC transporter, inner membrane binding component |
|---|
| Protein accession | YP_944307 |
|---|
| Protein GI | 119946627 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.525048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.629796 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATCTCTA GAATAAATCT TTACAAGTTA CTGCCATGGG CAGTAACTTG CCTTTTAATT
ACGCCCATAT TAGCACTTAT TTTAAGTGCT TTTCAGATCG ATGATAGTGG TAGTTTTCAA
CACTTAATTG ATACAGTATT GTGGGATTAC AGTTTAAATA CATTACTTAT GGTTTTAGGA
GTGATTACTT TAAGTTGTAT TTTTGCACTG CCCGTTGCCT GGTTTGTTGC CTGTTGCGAA
TTCCCCGGTC GTAGCATTCT GCAGTGGGCA TTAATGCTAC CGCTGGCTCT TCCGCCTTAT
ATCATTGCCA TTGTATACAC TGACTTGATG GACTTTTCAG GTCCAGTGCA GCATTTTTTA
CGTGCATTAA TGGGCTGGCA ACAGACATCT GATTATTATT TTCCCGATAT TCGTACTATT
TCCGGCGCCA TCATTATTTT AAGCTTAGCG CTCTATCCTT ATTTATATTT GTTATTGCGG
GGTGCTTTTT TAGGTCAATC GGGTGGATTA TTTCAAGCTG CCCGTACTCT GGGCTTATCA
CCTATGCGTG CTTTTTTACG TGTCTCCTTA CCGCTTTCTC GTACTGCTCT TGCGGTGGGA
TTATCATTAA TTGCGATGGA AACATTGGGT GATTTTGCAA CAGTTCATTA TTTTTCAGTC
AGCACCTTAA CCACGGCCGT TTATAATACC TGGCTAGAGT TAGGCAGTTT GACGACCGCT
GCAAAAATAT CATCACTGAT GTTATTGGCT CTGGTTATTT TAATCAGTCT CGAAAATTAC
AGCCGCCGCA GACAAAAATT ATACCAAGGT AGTGGTTCAA CCCATACCGA GTTACGTTTT
GTTTTACAGG GCTGGCAGAA GTGGGGTGTA TTAAGCTTTT CCTGGGGACT GTTATTTTTT
GCTTTTATTC TGCCTTTAGC GGTTTTGTTT TATTATGCGA GCCTCTATTT CAGCCAGTCA
TTTAACCTTT CTTTATGGAA ATACACCCTA AACAGTGTTT GGCTGGCAAC CATTGTTGCC
TCTTTAGCAC TATTAATCGC ATTAATTGTT AATTTCTACC AGCGCTTATC ACCGGGAGTA
TCGGCTAAAG CTACAATACG ATTATCCTCT TTAGGTTATG CACTGCCCGG TACCGTAGTT
GCGATCGCAG TGCTTATTCC CTTCACCAGT TTAGATTTGT GGCTCAACAG ACAGCTTGTT
GAGTATGGTT ATTCAAGAGT AGGGCTGCTG TTTTCCGGTA CGCTGTTCAT TTTAGTGGCC
GGTTATTTAG TGCGCTTTAG TGCGATAGCC GTTGGTAGTA TCGACAGCAG TCTGGCTCAA
GTTTCTCCGT CATTGGACAG TGCCTCGCGT ACGCTTGGGC AAAGTGCGGC ACAAACCATT
CGCCGCGTTG ATTTGCCGTT AATCACAAGA GGAATGTTAA GTGCCTTTAT TTTGGTTTTT
ATCGAGGCTA TGAAAGAACT GCCTACGGCT TTATTATTGC GCCCGTTTAA TTTTGAAACG
CTGGCAACTT ATGCTTATCA ATTTGTTTCT GATGAGATGA TAGAATATGC AGCCTTACCC
GCTTTATTAA TTGTTTTAAT AGGGCTTGTG CCTTTTATTG TTGTCAGCCG TTTAATGGAG
AAATCCTCTT AA
|
|---|
| Protein sequence | MISRINLYKL LPWAVTCLLI TPILALILSA FQIDDSGSFQ HLIDTVLWDY SLNTLLMVLG
VITLSCIFAL PVAWFVACCE FPGRSILQWA LMLPLALPPY IIAIVYTDLM DFSGPVQHFL
RALMGWQQTS DYYFPDIRTI SGAIIILSLA LYPYLYLLLR GAFLGQSGGL FQAARTLGLS
PMRAFLRVSL PLSRTALAVG LSLIAMETLG DFATVHYFSV STLTTAVYNT WLELGSLTTA
AKISSLMLLA LVILISLENY SRRRQKLYQG SGSTHTELRF VLQGWQKWGV LSFSWGLLFF
AFILPLAVLF YYASLYFSQS FNLSLWKYTL NSVWLATIVA SLALLIALIV NFYQRLSPGV
SAKATIRLSS LGYALPGTVV AIAVLIPFTS LDLWLNRQLV EYGYSRVGLL FSGTLFILVA
GYLVRFSAIA VGSIDSSLAQ VSPSLDSASR TLGQSAAQTI RRVDLPLITR GMLSAFILVF
IEAMKELPTA LLLRPFNFET LATYAYQFVS DEMIEYAALP ALLIVLIGLV PFIVVSRLME
KSS
|
|---|
| |