| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_1013 |
|---|
| Symbol | |
|---|
| ID | 3518719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 1034131 |
|---|
| End bp | 1035759 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637283478 |
|---|
| Product | iron(III) ABC transporter, permease protein |
|---|
| Protein accession | YP_267762 |
|---|
| Protein GI | 71278658 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0312612 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGCAC TGTATAACAG CAGAACATGG AAGTTATCTA GCTATATAAT TGCACTGGTA
TTGATAGTGC CAGTAGTGGT TATGCTAGTC GGTGGCGTTA GTGCTTCAAC GCAGCTGTTT
GTTCATTTAT GGCAAACAGT GCTACCAAGT TATCTTGAAA ACACCTTATT ACTTGCCTTT
TGGGTGGTGT TATTGGCGTT AGTTTTTGGC GTGTTTAGTG CTGCAATCAT TACGCAAACC
AACATTGTAT TTAAGCAGCA ACTTCGTTGG TTGTTACTCT TACCTTTAGC TATGCCGGCG
TATTTAGTCG CTTATCTTTA TACCGACTTA TTTGATTATG CAGGCCCTGT TCAGCGTGCC
TTAAGAGGCT GGTTTGATTG GCAATCGCCA AACGATTATT GGTTTTTTGA TATTCGTACC
TTACCCGGTG CTGCTTTAAT GCTGGCACTG GTGTTATTTC CCTATATTTA CATGCTAACG
CGTGGCGCTT TTGAGCAACA AGATCAAAAC TTAATTCGCG CAAGTCGATT ACTTGGCCTA
ACTGCCAAAC AAAGTTTCTT TAAAGTTGCT CTCCCTTTGG CAAGACCAGC GATTGCTGTT
TCGGCGAGTC TTGTTTTAAT GGAAACCTTA GCCGATTTTG CTACCGTACA ATACTTCTCT
GTTAACACGC TAACGACTGC TATTTATGAT ACTTGGCTTG GTTATGGCGA CCTCGGTGCA
GCCAATGCTT TAGCCAGTAT TTTAATGTTA TTGGTATTAT TTGTTGTGTT AGCAGAACAA
CGAAGTAGGG CAGGGTTACG TCATCAAAGT GCAAGACCTA ACTCAAAACG AGAACTGATA
CAGTTGTCTT TTAGCCAACA ACTTATTGCC AGCATTTTTT GCTGGGCACT GGTCATTTTA
GGTTTCTTAT TACCGATAAC CTTATTGATC ATTATGGCAG TGCAATACAG TGATTTTGCG
CAATTATCTG CTTTATTATC TACCGGTATC AATTCACTGA AGGTGTCGGT ATTTGCTGCG
ACAATTGCAG TTGTTATTGC TTTATCACTA GGTTTGTATC AGCGTTTACA TAATGATAAG
TATCGTCAAG TGCCACAACT GATATCAGGC TTTGGTTATG CCGTACCTGG CACTGTTTTG
GCTATGGCGA TGTTGTCAAC ATTAGGCCCC CTAGACCACT GGATTAACGA TGCGGCTGAA
TTTATAGGGT TTGGCGCGCC AGGGCTAATC TTATCAGGCT CTTTGTTTGC TATTGTATTC
GCACTGGTAG TACGTTTTTC TGCGATTGCT AATGGCACCA TTACGAGCGG TATAAAGCAA
ATTCCTCGAT CATTAGATTA CGCACCTGCC ACGTTAGGCG TTAATTTAAG AGGAAGTTTA
ACTAAAGTAC ATTTACCTAT TTTAACGCCA GCAATATTGG TGGCATGGTT ATTAGTTTTT
GTGGAAGCAA TGAAAGAATT ACCGGCAGTA TTATTATTAC GGCCTTTTAA TTTTGAAACG
TTAAGTAGTC AAATTTATCA GCTCATTTCT GATGAAGTGT TAGAGCAAGG CGCTTTAGGG
GCAATCCTCA TTGTGCTGTT CGGCTTATTA CCTATAGTGC TACTGAATAA GAGTAAGGAA
AAAGTATGA
|
|---|
| Protein sequence | MIALYNSRTW KLSSYIIALV LIVPVVVMLV GGVSASTQLF VHLWQTVLPS YLENTLLLAF
WVVLLALVFG VFSAAIITQT NIVFKQQLRW LLLLPLAMPA YLVAYLYTDL FDYAGPVQRA
LRGWFDWQSP NDYWFFDIRT LPGAALMLAL VLFPYIYMLT RGAFEQQDQN LIRASRLLGL
TAKQSFFKVA LPLARPAIAV SASLVLMETL ADFATVQYFS VNTLTTAIYD TWLGYGDLGA
ANALASILML LVLFVVLAEQ RSRAGLRHQS ARPNSKRELI QLSFSQQLIA SIFCWALVIL
GFLLPITLLI IMAVQYSDFA QLSALLSTGI NSLKVSVFAA TIAVVIALSL GLYQRLHNDK
YRQVPQLISG FGYAVPGTVL AMAMLSTLGP LDHWINDAAE FIGFGAPGLI LSGSLFAIVF
ALVVRFSAIA NGTITSGIKQ IPRSLDYAPA TLGVNLRGSL TKVHLPILTP AILVAWLLVF
VEAMKELPAV LLLRPFNFET LSSQIYQLIS DEVLEQGALG AILIVLFGLL PIVLLNKSKE
KV
|
|---|
| |