Gene Aave_0914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0914 
Symbol 
ID4666996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp995794 
End bp997470 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content73% 
IMG OID639822114 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_969286 
Protein GI120609608 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1178] ABC-type Fe3+ transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.363007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGCCTT TTCCTTCCCG GCTTTCGTTT TTCCTCCCCA CCGCCTTGCG TTTCCTCTCC 
GCCCTGCGCG CCGTTCCGCT GCTGCTGCTC GCCTTCTTCC TCACCCTGCC GGTGCTGGCC
GTGTTCGCGT CCTGGCTGCC GTGGGGGCAT GGCGGCGCCG AGTCCCTGGC CATCCTGCGC
GAGATGGCGG CCACGGTGCT GCCGGACTAT CTCGCCACCA CGGTTTGGCT CGCGCTCGCC
GTGGGTGCCG GCGCGGCGCT GGTGGGCACG GCCACCGCGG CAGCCGTGAC CCTGTTCGAC
TTCCGCGGCC GCCGCACGCT GGAGTGGCTG CTGCTGCTTC CGCTGGCCAT GCCGGCCTAC
GTCACGGCCT ATGCGTACAC CGATTTCCTG CAGTTCAGCG GCCCGCTGCA GGTCTGGCTG
CGCGCCACCT ACGGTCTGGA GGGCCGGCTG CTGCCCGAGG TGCGCAGCCT GGGCGGGGCG
GTGTGGGTGT TCGTCTTCTC GCTCTATCCG TACGTCTATC TGCTGGCGCG CACGGCGCTC
GGCGAGCGCG CCGCCCACCT CATGGAGGCC GCACGCCTGC TGGGTGCGCC GCTCGCGCGC
CGCGTGCGCA CCGTGGCGCT GCCGCTGGCG CGTCCCGCCG TGGCGGCGGG CGTGGCCCTG
GCGCTGATGG AGACGCTGGC GGATTTCGGG GTCGCGAGCT ATTTCGGCAT CCAGACCTTC
ACGACGGGCA TCTACAAGGC CTGGCTGTCG ATGGACAACC GCCTCGCCGC GGCGCAGCTC
GCCACGCTGC TGCTGGTGCT GGTGGTCGTG CTGCTGCAGC TGGAGCAGCG CGCGCAGCGG
CGCATGCGCT TTGCCACCAG CGGCGTGGGC CGCGCGGGCT CCGCCGAGGC CCAGCCCCAG
CGGCTCGCCG GCTGGCGCTG CGTGGCCGCC TGGCTGGTGT GCGGGCTGCC GGTGGTGATG
GGCTTCTTCG CGCCGGTGGC CTTCATGCTG CGCCCGCTGG CCGCGGACTG GTCCGTGCTG
CCCTGGGACC GCTTCGTGGA ATGGGCCGGC CACAGTGTGC GGCTGGGCGC CATCACCGCG
GTGCTGGCCG TGGGCGTGGC GCTGGCGCTG GCCTTCGCCG TGCGGCGCCG CGCGGGTCGC
CTGACGCGTG GCGTGGTGCA ACTGGCCAGC GTGGGCTATG CCGTGCCGGG CGCGGTGATC
GTCGTCGGCC TGCTGCTGCC CGTGGGCTGG CTGCAGGCCG CGGTGCCGGA ATGGCGCGTG
CCGGCGCTCG TCACCGCCAC TGCGGTGGGC ATCGTCTGGG CCTACCTCGT TCGCTTCTGC
GCGGTGGCGC TGCAATCGGT GCAGAGCGGC TATGCGCGCA TCCCCGCCAG CCTCGACGAT
TCCGCGCGCA TGCTCGGCGC TGGCGGCCTC GGCCTGCTCG CGCGCGTGCA CTGGCCGCTG
CTGCGCCGCT CCACCGCGGC GGCGGCGCTG CTGGTGTTCG TGGACGTGAT GAAGGAGCTG
CCCGCCACCA TGGTGCTGCG CCCCTTCAAC AGCGACACCC TGGCCGTCGT CGCCTACCAG
CTCGCGCGCG ACGAGCGCCT GGGCGAGGCG GCCCTGCCGT CGCTCGCGCT GGTGGCCGTG
GGGCTGGTGC CCGTCATTTT GCTGAGCCGC ACGCTGCGGG CGTCCGGTTC GCGCTGA
 
Protein sequence
MRPFPSRLSF FLPTALRFLS ALRAVPLLLL AFFLTLPVLA VFASWLPWGH GGAESLAILR 
EMAATVLPDY LATTVWLALA VGAGAALVGT ATAAAVTLFD FRGRRTLEWL LLLPLAMPAY
VTAYAYTDFL QFSGPLQVWL RATYGLEGRL LPEVRSLGGA VWVFVFSLYP YVYLLARTAL
GERAAHLMEA ARLLGAPLAR RVRTVALPLA RPAVAAGVAL ALMETLADFG VASYFGIQTF
TTGIYKAWLS MDNRLAAAQL ATLLLVLVVV LLQLEQRAQR RMRFATSGVG RAGSAEAQPQ
RLAGWRCVAA WLVCGLPVVM GFFAPVAFML RPLAADWSVL PWDRFVEWAG HSVRLGAITA
VLAVGVALAL AFAVRRRAGR LTRGVVQLAS VGYAVPGAVI VVGLLLPVGW LQAAVPEWRV
PALVTATAVG IVWAYLVRFC AVALQSVQSG YARIPASLDD SARMLGAGGL GLLARVHWPL
LRRSTAAAAL LVFVDVMKEL PATMVLRPFN SDTLAVVAYQ LARDERLGEA ALPSLALVAV
GLVPVILLSR TLRASGSR