More than 300 homologs were found in PanDaTox collection
for query gene Mmc1_2440 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008576  Mmc1_2440  response regulator receiver protein  100 
 
 
310 aa  645    Magnetococcus sp. MC-1  Bacteria  normal  0.814806  normal 
 
 
-
 
NC_008576  Mmc1_2442  response regulator receiver protein  37.46 
 
 
292 aa  192  4e-48  Magnetococcus sp. MC-1  Bacteria  normal  0.0259595  normal 
 
 
-
 
NC_007298  Daro_0110  response regulator receiver  35.89 
 
 
296 aa  189  7e-47  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_0241  response regulator receiver protein  38.51 
 
 
309 aa  186  6e-46  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_1537  response regulator receiver protein  37.98 
 
 
311 aa  181  1e-44  Magnetococcus sp. MC-1  Bacteria  normal  0.376192  normal 
 
 
-
 
NC_007520  Tcr_0195  response regulator receiver domain-containing protein  34.95 
 
 
300 aa  169  7e-41  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4510  response regulator receiver domain-containing protein  31.71 
 
 
310 aa  144  3e-33  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.078722 
 
 
-
 
NC_011831  Cagg_2467  response regulator receiver modulated serine phosphatase  35.76 
 
 
385 aa  91.7  1e-17  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1040  response regulator receiver sensor signal transduction histidine kinase  35.62 
 
 
365 aa  87.4  3e-16  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_0280  hypothetical protein  34.64 
 
 
287 aa  86.3  6e-16  Maricaulis maris MCS10  Bacteria  normal  0.0146684  normal 
 
 
-
 
NC_007948  Bpro_1814  PAS/PAC sensor hybrid histidine kinase  32.32 
 
 
566 aa  85.5  0.000000000000001  Polaromonas sp. JS666  Bacteria  normal  hitchhiker  0.000267062 
 
 
-
 
NC_011884  Cyan7425_0584  response regulator receiver protein  34.39 
 
 
216 aa  83.6  0.000000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.0767221  normal 
 
 
-
 
NC_011729  PCC7424_5086  response regulator receiver modulated diguanylate cyclase  38.28 
 
 
465 aa  83.6  0.000000000000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011365  Gdia_3078  CheA signal transduction histidine kinase  39.62 
 
 
719 aa  83.2  0.000000000000005  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  decreased coverage  0.00446051 
 
 
-
 
NC_008789  Hhal_2168  response regulator receiver protein  39.82 
 
 
120 aa  82  0.00000000000001  Halorhodospira halophila SL1  Bacteria  normal  0.747517  n/a   
 
 
-
 
NC_011369  Rleg2_2748  two component transcriptional regulator, winged helix family  32.18 
 
 
233 aa  82.4  0.00000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3011  two component transcriptional regulator, winged helix family  32.18 
 
 
233 aa  82.4  0.00000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0671  two component LuxR family transcriptional regulator  31.87 
 
 
333 aa  81.6  0.00000000000002  Methylibium petroleiphilum PM1  Bacteria  normal  0.0205263  normal 
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  33.16 
 
 
407 aa  80.9  0.00000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.142048 
 
 
-
 
NC_011369  Rleg2_3265  response regulator receiver protein  40 
 
 
122 aa  80.5  0.00000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.571434  normal  0.349593 
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  33.16 
 
 
397 aa  80.5  0.00000000000003  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.543575 
 
 
-
 
NC_011989  Avi_4317  chemotaxis receiver protein  35.34 
 
 
122 aa  80.5  0.00000000000004  Agrobacterium vitis S4  Bacteria  normal  0.257676  n/a   
 
 
-
 
NC_010581  Bind_3546  two component transcriptional regulator  38.14 
 
 
273 aa  80.5  0.00000000000004  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.376665  normal  0.686762 
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  30.43 
 
 
222 aa  79.3  0.00000000000007  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_007517  Gmet_2308  response regulator receiver protein  37.17 
 
 
123 aa  79.3  0.00000000000008  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1271  transcriptional regulator, Crp/Fnr family  36.23 
 
 
350 aa  79.3  0.00000000000008  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3553  response regulator receiver  38.02 
 
 
384 aa  78.2  0.0000000000002  Dechloromonas aromatica RCB  Bacteria  normal  0.739627  normal 
 
 
-
 
NC_009719  Plav_0399  two component transcriptional regulator  35.71 
 
 
272 aa  77.8  0.0000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.802217  normal 
 
 
-
 
NC_007952  Bxe_B1713  two component LuxR family transcriptional regulator  36.76 
 
 
361 aa  78.2  0.0000000000002  Burkholderia xenovorans LB400  Bacteria  normal  0.310925  normal 
 
 
-
 
NC_008577  Shewana3_0481  response regulator receiver protein  39.53 
 
 
523 aa  77  0.0000000000003  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A3585  two component LuxR family transcriptional regulator  34.07 
 
 
306 aa  77  0.0000000000004  Methylibium petroleiphilum PM1  Bacteria  normal  0.295986  normal 
 
 
-
 
NC_009654  Mmwyl1_0419  two component transcriptional regulator  34.46 
 
 
229 aa  76.6  0.0000000000005  Marinomonas sp. MWYL1  Bacteria  normal  0.509677  normal 
 
 
-
 
NC_010322  PputGB1_2876  two component transcriptional regulator  34.48 
 
 
226 aa  76.6  0.0000000000005  Pseudomonas putida GB-1  Bacteria  normal  0.5251  normal 
 
 
-
 
NC_002939  GSU1289  chemotaxis protein CheY  35.34 
 
 
121 aa  76.3  0.0000000000006  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0649  response regulator receiver Signal transduction histidine kinase  31.94 
 
 
387 aa  76.3  0.0000000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  0.736737  normal  0.226718 
 
 
-
 
NC_011769  DvMF_1097  response regulator receiver modulated metal dependent phosphohydrolase  38.52 
 
 
391 aa  76.3  0.0000000000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.151318 
 
 
-
 
NC_010002  Daci_1507  response regulator receiver modulated diguanylate cyclase  33.88 
 
 
308 aa  76.3  0.0000000000006  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.914031 
 
 
-
 
NC_009620  Smed_3762  putative adenylate/guanylate cyclase  34.81 
 
 
520 aa  76.3  0.0000000000006  Sinorhizobium medicae WSM419  Bacteria  normal  0.978534  normal 
 
 
-
 
NC_014248  Aazo_1477  response regulator receiver modulated diguanylate cyclase  31.76 
 
 
317 aa  76.3  0.0000000000006  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0684  two component, sigma54 specific, Fis family transcriptional regulator  37.78 
 
 
456 aa  76.3  0.0000000000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0926  response regulator PleD  32.88 
 
 
455 aa  76.3  0.0000000000007  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.773886 
 
 
-
 
NC_008312  Tery_3999  adenylate/guanylate cyclase  31.88 
 
 
351 aa  76.3  0.0000000000007  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.558191 
 
 
-
 
NC_013173  Dbac_2984  two component, sigma54 specific, transcriptional regulator, Fis family  33.1 
 
 
458 aa  75.9  0.0000000000008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.826768  n/a   
 
 
-
 
NC_007947  Mfla_1761  two component LuxR family transcriptional regulator  35.07 
 
 
311 aa  75.9  0.0000000000008  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3564  response regulator receiver protein  37.27 
 
 
122 aa  75.9  0.0000000000009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0923704 
 
 
-
 
NC_013440  Hoch_4952  response regulator receiver protein  39.29 
 
 
317 aa  75.9  0.0000000000009  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2907  winged helix family two component transcriptional regulator  33.79 
 
 
226 aa  75.1  0.000000000001  Pseudomonas putida KT2440  Bacteria  hitchhiker  0.00514074  normal 
 
 
-
 
NC_010718  Nther_0251  response regulator receiver protein  38.05 
 
 
126 aa  75.1  0.000000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.102048 
 
 
-
 
NC_011729  PCC7424_1523  CheA signal transduction histidine kinase  37.4 
 
 
808 aa  75.1  0.000000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_0218  two component LuxR family transcriptional regulator  40.98 
 
 
339 aa  75.5  0.000000000001  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2784  two component transcriptional regulator  33.79 
 
 
226 aa  75.1  0.000000000001  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3599  two component Fis family transcriptional regulator  37.82 
 
 
459 aa  75.5  0.000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3524  two component LuxR family transcriptional regulator  36 
 
 
353 aa  75.5  0.000000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  0.406085  normal  0.428998 
 
 
-
 
NC_011989  Avi_1750  response regulator PleD  37.93 
 
 
457 aa  75.5  0.000000000001  Agrobacterium vitis S4  Bacteria  normal  0.263569  n/a   
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  36.11 
 
 
338 aa  75.1  0.000000000002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  36.11 
 
 
338 aa  75.1  0.000000000002  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_0639  two component, sigma54 specific, Fis family transcriptional regulator  38.57 
 
 
455 aa  74.3  0.000000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4456  PAS/PAC sensor hybrid histidine kinase  37.4 
 
 
1415 aa  74.3  0.000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  36.11 
 
 
338 aa  74.7  0.000000000002  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3742  two component transcriptional regulator, winged helix family  34.27 
 
 
263 aa  74.7  0.000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_2977  response regulator receiver domain-containing protein  35.71 
 
 
303 aa  74.7  0.000000000002  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.13601 
 
 
-
 
NC_007912  Sde_3108  response regulator receiver domain-containing protein  37.29 
 
 
120 aa  74.7  0.000000000002  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  36.11 
 
 
338 aa  75.1  0.000000000002  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2294  two component transcriptional regulator  36.05 
 
 
226 aa  74.7  0.000000000002  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.000876575  normal  0.575243 
 
 
-
 
NC_009656  PSPA7_1784  putative two-component response regulator  37.82 
 
 
571 aa  74.3  0.000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1038  sensory box histidine kinase/response regulator  38.32 
 
 
513 aa  73.9  0.000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1797  DNA-binding response regulator/sensor histidine kinase  37.39 
 
 
961 aa  74.3  0.000000000003  Porphyromonas gingivalis W83  Bacteria  n/a    normal 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  41.74 
 
 
377 aa  73.9  0.000000000003  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_013440  Hoch_3141  PAS/PAC sensor hybrid histidine kinase  36.25 
 
 
1406 aa  73.9  0.000000000003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.367834  normal  0.195519 
 
 
-
 
NC_013161  Cyan8802_1963  two component transcriptional regulator, winged helix family  34.04 
 
 
246 aa  74.3  0.000000000003  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.470012 
 
 
-
 
NC_010501  PputW619_2409  two component transcriptional regulator  33.1 
 
 
226 aa  73.9  0.000000000003  Pseudomonas putida W619  Bacteria  normal  0.615174  normal 
 
 
-
 
NC_008321  Shewmr4_0483  response regulator receiver sensor signal transduction histidine kinase  37.3 
 
 
524 aa  73.9  0.000000000003  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1887  adenylate/guanylate cyclase  38.6 
 
 
403 aa  73.9  0.000000000003  Methylocella silvestris BL2  Bacteria  n/a    normal  0.522729 
 
 
-
 
NC_010524  Lcho_1083  two component LuxR family transcriptional regulator  30.56 
 
 
316 aa  74.3  0.000000000003  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008322  Shewmr7_3547  response regulator receiver sensor signal transduction histidine kinase  37.3 
 
 
524 aa  74.3  0.000000000003  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1936  two component transcriptional regulator, winged helix family  34.04 
 
 
246 aa  74.3  0.000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009675  Anae109_1134  response regulator receiver protein  37.72 
 
 
138 aa  73.9  0.000000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.461969  hitchhiker  0.00297359 
 
 
-
 
NC_011365  Gdia_2950  two component transcriptional regulator, winged helix family  40.18 
 
 
258 aa  73.6  0.000000000004  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0307025  normal  0.153934 
 
 
-
 
NC_007604  Synpcc7942_0095  two component transcriptional regulator  34.27 
 
 
249 aa  73.6  0.000000000004  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  41.74 
 
 
377 aa  73.6  0.000000000004  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_008527  LACR_0898  DNA-binding response regulator  31.38 
 
 
234 aa  73.6  0.000000000004  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2219  response regulator  38.39 
 
 
123 aa  73.2  0.000000000005  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3542  response regulator receiver  38.39 
 
 
124 aa  73.2  0.000000000005  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.20091 
 
 
-
 
NC_007413  Ava_1086  multi-sensor hybrid histidine kinase  36.09 
 
 
1431 aa  73.2  0.000000000005  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2150  response regulator receiver Signal transduction histidine kinase  37.19 
 
 
443 aa  73.2  0.000000000005  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.394463 
 
 
-
 
NC_007493  RSP_2599  phosphate regulon transcriptional regulator, PhoR  35.2 
 
 
230 aa  73.2  0.000000000005  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1257  two component transcriptional regulator  35.2 
 
 
230 aa  73.2  0.000000000005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.621627  normal 
 
 
-
 
NC_007513  Syncc9902_2107  two component LuxR family transcriptional regulator  36.64 
 
 
245 aa  73.2  0.000000000005  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  30.73 
 
 
328 aa  73.2  0.000000000005  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_009012  Cthe_1826  response regulator receiver sensor signal transduction histidine kinase  32.85 
 
 
363 aa  73.2  0.000000000005  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_0919  two component transcriptional regulator, winged helix family  33.33 
 
 
227 aa  73.6  0.000000000005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.767242 
 
 
-
 
NC_008531  LEUM_0585  DNA-binding response regulator  35.21 
 
 
230 aa  73.6  0.000000000005  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00125793  n/a   
 
 
-
 
NC_009921  Franean1_6993  GAF sensor hybrid histidine kinase  33.94 
 
 
1159 aa  73.2  0.000000000005  Frankia sp. EAN1pec  Bacteria  normal  0.922616  normal 
 
 
-
 
NC_011071  Smal_1853  response regulator receiver protein  36.21 
 
 
121 aa  73.2  0.000000000006  Stenotrophomonas maltophilia R551-3  Bacteria  hitchhiker  0.00571982  normal  0.853875 
 
 
-
 
NC_007335  PMN2A_1537  two component LuxR family transcriptional regulator  36.24 
 
 
242 aa  73.2  0.000000000006  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0751  response regulator receiver protein  36.61 
 
 
121 aa  72.8  0.000000000006  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0722  response regulator receiver protein  36.61 
 
 
121 aa  72.8  0.000000000006  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011769  DvMF_0823  two component, sigma54 specific, transcriptional regulator, Fis family  36.03 
 
 
456 aa  72.8  0.000000000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.449732 
 
 
-
 
NC_008819  NATL1_02441  two-component response regulator  36.24 
 
 
242 aa  72.8  0.000000000006  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.72299  normal 
 
 
-
 
NC_008463  PA14_20780  putative two-component response regulator  36.97 
 
 
571 aa  72.8  0.000000000006  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.283191  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>