| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2784 |
|---|
| Symbol | |
|---|
| ID | 5193771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3165448 |
|---|
| End bp | 3166128 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640587234 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001268100 |
|---|
| Protein GI | 148547998 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGCG TACTGACCAT CGAAGACGAC GCCGTCACCG GCCAGGAAAT CGTCGCCGAA
CTGACCAGCC ACGGTCTGGA AGTGGATTGG GCCGACAATG GCCGCGAAGG CCTGGCCAAA
GCCATTGCGG GCGGCTACGA CCTGATCACC CTGGACCGCA TGCTGCCCGA GGTTGACGGC
CTGACCATCG TCACCACCCT GCGCAACCTC AAGATCGCTA CGCCGATCCT GATGATCAGC
GCCCTCTCCG ACGTCGATGA GCGGGTGCGC GGCCTGCGTG CAGGCGGGGA CGACTACCTG
ACCAAGCCGT TCGCCTCCGA CGAAATGGCC GCGCGAGTCG AGGTATTGCT GCGCCGTAAC
AGCGTACCCA CGACTCAGAC CCGCTTGCAG GTTGCCGATC TGCAGCTGGA CCTGATCAGC
CACGAGGCGC GCCGCGGTGA CAACACCCTC AACTTGTTGC CCACCGAGTA CAAGCTGCTG
GAGTACCTGA TGCGCCACAG CGGCCAGGTG ATCACGCGGA TGATGATTTT CGAGGAGGTC
TGGGGCTATC ACTTCGACCC GGGCACCAAC CTGATCGACG TGCACATCGG CCGCCTGCGC
AAGAAGATCG ACTCACCCGG CCAGTCGCCG CTGATCCGTA CGGTACGGGG CTCCGGCTAT
GCCATTGCTG AACCCGTCTA A
|
|---|
| Protein sequence | MPRVLTIEDD AVTGQEIVAE LTSHGLEVDW ADNGREGLAK AIAGGYDLIT LDRMLPEVDG
LTIVTTLRNL KIATPILMIS ALSDVDERVR GLRAGGDDYL TKPFASDEMA ARVEVLLRRN
SVPTTQTRLQ VADLQLDLIS HEARRGDNTL NLLPTEYKLL EYLMRHSGQV ITRMMIFEEV
WGYHFDPGTN LIDVHIGRLR KKIDSPGQSP LIRTVRGSGY AIAEPV
|
|---|
| |