| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_6993 |
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| Symbol | |
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| ID | 5675304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8515355 |
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| End bp | 8518834 |
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| Gene Length | 3480 bp |
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| Protein Length | 1159 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641245839 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_001511230 |
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| Protein GI | 158318722 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.922616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCCTA ATCCGTCTAC TCTACTGCGG GACATCCGCG AGGATCGGGA CATCTCTCAT
GCCGCTTCTC GCGCCGCTTG GCACAGCGGC CGCACGACCG GGCTGGAGGA CGAGACGGTG
ACTGAGGTAA CGGCGCGTAA CCAGACCCCG GCCCAGCTGG ACGACCCGGC GCTGCGTCAG
TTGCTCGCCG GTCTCACCGC CGTGCGGGGT GGGGATTTCG GAACCCGGCT GCCGCGCGTC
GGCGACGAGC TGATGGACGA GATCGCCACC GTCTTCAACG GGATGATCGA CCAGCTCGCG
CTGTTCACCT CCGAGGTGAC GCGGGTGGCC CGGGAGGTCG GCACCGAGGG CAAGCTCGGC
GGCCAGGCCG AGGTGCCGGG CGTCTCCGGC TCCTGGAAGG ACCTGACCGA CAACGTCAAC
GCGATGGCGG GGAACCTGAC CGGCCAGGTC CGTGACATCG CGCAGGTCGC GACGGCGGTC
GCGGAGGGCG ACCTCTCCCA GAAGATCCGC GTCGACGCCC GGGGCGAGAT TTTGGAGCTG
AAGGAGACCA TCAACACGAT GGTCGATCAG CTTTCGGGTT TCGCGGACGA GGTGACGCGG
GTGGCTCGGG AGGTCGGCAC CGACGGTCGT CTCGGTGGTC AGGCGGACGT CAAAGGTGTG
TCGGGTACCT GGCGCGACCT CACCGAATCC GTCAACGTCA TGGCCGGCAA CCTGACCAGC
CAGGTGCGTT CCATCGCGCA GGTCGCGACG GCGGTCGCGC GGGGCGACCT CTCCCAGAAG
ATCCGCGTCG ACGCCCGGGG CGAGATTTTG GAGCTGAAGG AGACCATCAA CACGATGGTC
GATCAGCTTT CGGGTTTCGC GGACGAGGTG ACGCGGGTGG CTCGGGAGGT CGGCACCGAC
GGCCGCCTCG GTGGCCAGGC GAGCGTCAAG GGCGTCTCCG GCACCTGGAA GGACCTGACC
GACAACGTCA ACTTCATGGC GAACAACCTC ACCAGCCAGG TCCGCAACAT CGCCCAGGTC
ACCACGGCCG TCGCCCGCGG TGACCTGACC AGGAAGATCG ACGTCGACGC CCGCGGCGAG
ATCCTCGAAC TGAAAACGAC CATCAACACG ATGGTGGACC AGCTGTCCTC GTTCGCGGCC
GAGGTGACCC GGGTGGCGCG CGAGGTCGGC ACGGACGGCA TCCTCGGCGG CCAGGCGGAG
GTCGAGGGAC TCTCCGGCAC CTGGAAGCGC CTGACCGAGA ACGTCAACGA GCTCGCCGGG
AACCTCACCC GCCAGGTCCG GGCCATCGCC GCCGTCACCA GCGCGGTCGC CACCGGCGAC
CTGACCAGGT CGATCACGGT CGACGCGCAG GGCGAGGTCG CCGAGCTCAA GGACAACATC
AACGCGATGG TCCGCTCCCT GCGCGAGACC ACCCGCGCCA ACCACGAACA GGACTGGCTG
AAGACCAGCC TCGCCCACAT CGCCGGGCTC ATGCAGGGCC ACCGCGAGCT GGAGACCGTC
GCGCAGCTGG TCATCGACGA GCTGACCCCG ATGCTCGACG CGCAGCACGG CACCTTCTTC
CTCGCCGACG CCGGTGTGGA CGCCCCGGCG CTCACCCTCA TCGCGAGCTA CGGGTACCGG
CCCACCCCCG ACATGCCGCG CAGGTTCGAG TTCGGCCAGT CGCTCGTCGG GCAGGCGGCG
CGGACGAAAC GGTCCATCGT GGCCCGCACC CCCGCCGACT ACCTGAAGAT CGCCTCCAGC
CTCGGCGAGG CGACCCCGGT GACGCTGATC GTGCTGCCGA TCCTGTTCGA GGACCAGGTG
CTCGGCGTCG TCGAGCTCGC CTCCTTCACC CCGTTCACCC AGGTCCACCT CGACCTGCTG
AACCAGCTGA CGGAGACGAT CGGCGTCAAC GTCAACACGA TCATCGCGAA CTCGCGGACG
GACGCGCTGC TCGAGGAGTC CCAGCGGCTC GCGGGCGAGC TGCAGGCCCG GTCCGAGGAG
CTGCAGTCCC GCCAGGAAGA CCTCCAGCTC TCCAACGCGG AGCTGGAGGA GAAGGCCACC
CTGCTGGCCA GGCAGAACCA CGACATCGAG GTCAAGAACG CCGAGATCGA ACAGGCCCGC
CAGGAGCTGG AGGAACGCGC CCGGCAGCTG GCGCTCGCCT CCAAGTACAA GTCCGAGTTC
CTGGCGAACA TGTCGCACGA GCTGCGCACA CCACTGAACA GCCTGCTGAT TCTCGCCCGC
CTGCTGGCGC AGAACCCGAC CCGCAACCTC ACCGCCAAGC AGGTGGAGTA CGCCCACGTC
ATCCACACCG CCGGCTCGGA TCTACTTCAG CTGATCAACG ACATTCTCGA CCTCTCCAAG
GTCGAGGCCG GGAAGATGGA CATCCACCTG GAACGGGTCG TTCTGCGTGA TCTCGCCGAG
GACCTGAAGA GCACCTTCTC GCCGATCACC GTGGAGAAGG GCCTGCGGTT CACCGTGGAC
CTCGCCCCCG GCATACCGGC CGATCTCCTC ACCGATCAGC ACCGCCTCGC GCAGGTGCTG
CGCAACCTGC TCTCCAACGC GGTGAAGTTC ACCGAGCGCG GCAGCGTCGA ACTCGCCATC
GTCGCCACCC TGGGCGGGGA CCTGTCACCG GCCACCCCCA GCGTCACCTT CAAGGTCACC
GATACCGGCG TCGGTATCGC CGAGGAGAAC CTCGAACGCA TCTTCGGGGC GTTCCAGCAG
GGCGACGGCA CCACCAGCCG CCGCTACGGC GGCACCGGCC TCGGCCTGTC CATCTGCCGT
GAGGTCGCCG CCCTCCTCGG CGGCGAGATC GAGGCCCGCA GCGAGTTCGG CAGGGGCAGC
ACCTTCAGCC TGCGGCTGCC GCTGGCTCCC CCGCCGCCGA CTGAGCCCGA GATGGTTCCT
CGGCCCCGCC GCACGCAGGC CCTGAGCGAG ACCGAGCCTT CGTCAGGCGA CCCGCGCCCC
GTCGGCGCGC CGTCCGCCCT CGCCGCCCCT GCGCCGCCCG CCGTCGTGCC CGGCCCGCCG
AGCGCCCTGC CCGTGGACGA CCGGCGTCCG CCGCGGCAGG CGGCCTACAA CAACGACCAG
CTGACCGGGT GCACGGTGCT GGTGGTGGAC GACGACGTGC GCAACGTCTT CGCCATCACC
AGCATCCTCG AGCTCTACGG GCTGAACGTG ATCCACGCCG AGAACGGTCG CCGGGGCATC
GAGATGCTGC AGTCCGATCC GAGCATCGAC CTGGTCCTGA TGGACGTCAT GATGCCCGAG
ATGGACGGCT ACACGACCAT GACCGCGATC CGCACCATGC CGCGGATCGC GGATCTGCCG
ATCATCGCCG TCACCGCGAA GGCCATGCCC GACGACCGGC AGAAGTGCCT CGACGCCGGC
GCGACCGACT ACATCACCAA GCCCGTCGAC GTCGACGAGC TCCTCGCCTG CATCCGAACG
AGGCTGGTCA CCGGTTCGGG CGTCGGCGGG CGGCGGGCAG GAGGGCTGGG CGCTGGGTGA
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| Protein sequence | MSPNPSTLLR DIREDRDISH AASRAAWHSG RTTGLEDETV TEVTARNQTP AQLDDPALRQ
LLAGLTAVRG GDFGTRLPRV GDELMDEIAT VFNGMIDQLA LFTSEVTRVA REVGTEGKLG
GQAEVPGVSG SWKDLTDNVN AMAGNLTGQV RDIAQVATAV AEGDLSQKIR VDARGEILEL
KETINTMVDQ LSGFADEVTR VAREVGTDGR LGGQADVKGV SGTWRDLTES VNVMAGNLTS
QVRSIAQVAT AVARGDLSQK IRVDARGEIL ELKETINTMV DQLSGFADEV TRVAREVGTD
GRLGGQASVK GVSGTWKDLT DNVNFMANNL TSQVRNIAQV TTAVARGDLT RKIDVDARGE
ILELKTTINT MVDQLSSFAA EVTRVAREVG TDGILGGQAE VEGLSGTWKR LTENVNELAG
NLTRQVRAIA AVTSAVATGD LTRSITVDAQ GEVAELKDNI NAMVRSLRET TRANHEQDWL
KTSLAHIAGL MQGHRELETV AQLVIDELTP MLDAQHGTFF LADAGVDAPA LTLIASYGYR
PTPDMPRRFE FGQSLVGQAA RTKRSIVART PADYLKIASS LGEATPVTLI VLPILFEDQV
LGVVELASFT PFTQVHLDLL NQLTETIGVN VNTIIANSRT DALLEESQRL AGELQARSEE
LQSRQEDLQL SNAELEEKAT LLARQNHDIE VKNAEIEQAR QELEERARQL ALASKYKSEF
LANMSHELRT PLNSLLILAR LLAQNPTRNL TAKQVEYAHV IHTAGSDLLQ LINDILDLSK
VEAGKMDIHL ERVVLRDLAE DLKSTFSPIT VEKGLRFTVD LAPGIPADLL TDQHRLAQVL
RNLLSNAVKF TERGSVELAI VATLGGDLSP ATPSVTFKVT DTGVGIAEEN LERIFGAFQQ
GDGTTSRRYG GTGLGLSICR EVAALLGGEI EARSEFGRGS TFSLRLPLAP PPPTEPEMVP
RPRRTQALSE TEPSSGDPRP VGAPSALAAP APPAVVPGPP SALPVDDRRP PRQAAYNNDQ
LTGCTVLVVD DDVRNVFAIT SILELYGLNV IHAENGRRGI EMLQSDPSID LVLMDVMMPE
MDGYTTMTAI RTMPRIADLP IIAVTAKAMP DDRQKCLDAG ATDYITKPVD VDELLACIRT
RLVTGSGVGG RRAGGLGAG
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