| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3599 |
|---|
| Symbol | |
|---|
| ID | 3758585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 3556025 |
|---|
| End bp | 3557404 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637784520 |
|---|
| Product | two component Fis family transcriptional regulator |
|---|
| Protein accession | YP_390087 |
|---|
| Protein GI | 78358638 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACG ACACGCATAT TCTGCTTCTT GACGACGAAA AAAACTATCT TCTGGTGCTG
GAAGCGCTGC TGACCGACGC CGGATACAAG GTCACAGCCA TCAACGACCC TGAAACCGGT
CTGGCGTTTC TGGATGAATC GGATGTCGAT GTCATCGTCA CCGACATGAA AATGCCCAAA
ATCACCGGCC AGAACGTGCT TGACCATGTA AAAAAACGGT TTGCGCACAT TCCGGTGCTC
ATCATGACTG CCTTCGGCTC CATAGAGGGC GCGGTGGAAG TGATGAAGAC AGGGGCCTTC
GACTACATCA CCAAACCCTT TTCCAACGAT GAACTGCTGC TTTCTGTGCA GAACGCAGCA
GAACTCGCCC TGGCGCACCG CCGCTACCGC CTGCTGGCTG AAGCCATGGA GCAACGCTTT
GGCCCGCGCC AGATAGTGGG CAACAGCCGC GCCATACGCG ACGTGCTGAC CATGGTGGAA
AGAGCCGCGC CCAGCAAGTC AACGGTGCTC ATCACCGGAG AATCCGGCAC CGGCAAAGAA
CTGGTGGCCC GTGCCATACA TTATTCATCA CCGCGCAAGG ACGGCCCCTT CATCAGCGTC
AACTGCATGG CGCTGAACGC CGGCGTGCTG GAAAGCGAAC TGTTCGGCCA CGAAAAAGGC
TCGTTCACCG GCGCCACGGC CATGAAACGC GGCCGCTTTG AAATGGCGCA CGGAGGAACG
CTTTTTCTGG ATGAAATAGG CGAGCTTTCG CACGACATGC AGGTAAAGCT GCTGCGCGTG
CTGCAGGAGC GCACATTTGA GCGGGTGGGC GGCAGCGCCC CCATAGAAGT GGACATACGC
GTGGTGGCCG CCACCAACAA AAACCTGCTT GAAGAGGTGG GCAAAGGCAG CTTCCGCGAA
GACCTGTACT ACAGGCTCAA CGTGGTGCAG GTGGAACTGC CGCCGCTGCG CGAACGCCGC
GAAGACATTC CGCTGCTGGC CGCGCATTTC GTGCACAAAT ATGCCGAGGA CAACGAACTG
CCGCAGAAGA ACTTTTCTCC TGAAGCGCTG GACTACCTGA CCGGCTATGA ATGGCCCGGC
AACATCAGGC AGCTGGAAAA CATCGTGGAA CGCTGCATGG TGCTTACGCC TTCGGCCACC
ATCGGCGTGG AAGACCTGCC CCATGAAATA CGCGACGAGG AAACCCAGCT GAAAAGCGCC
GTGGACCTGC TTCCCGTCAA GCTGGATCTT GCCGACACAC TGGACAAGCT GGAAGCGGCA
CTCATCCGCC GCGCGCTGGT GCGGTCCGAA TTCGTGCAGG TCAAGGCTGC GGAACTGCTG
GGCATTTCTA AAAGTCTGCT GCAATACAAA CTGAAAAAAT ACGGCATCAC AGGCCATTGA
|
|---|
| Protein sequence | MTNDTHILLL DDEKNYLLVL EALLTDAGYK VTAINDPETG LAFLDESDVD VIVTDMKMPK
ITGQNVLDHV KKRFAHIPVL IMTAFGSIEG AVEVMKTGAF DYITKPFSND ELLLSVQNAA
ELALAHRRYR LLAEAMEQRF GPRQIVGNSR AIRDVLTMVE RAAPSKSTVL ITGESGTGKE
LVARAIHYSS PRKDGPFISV NCMALNAGVL ESELFGHEKG SFTGATAMKR GRFEMAHGGT
LFLDEIGELS HDMQVKLLRV LQERTFERVG GSAPIEVDIR VVAATNKNLL EEVGKGSFRE
DLYYRLNVVQ VELPPLRERR EDIPLLAAHF VHKYAEDNEL PQKNFSPEAL DYLTGYEWPG
NIRQLENIVE RCMVLTPSAT IGVEDLPHEI RDEETQLKSA VDLLPVKLDL ADTLDKLEAA
LIRRALVRSE FVQVKAAELL GISKSLLQYK LKKYGITGH
|
|---|
| |