Gene Smed_3762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3762 
Symbol 
ID5319054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp206007 
End bp207569 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content61% 
IMG OID640775575 
Productputative adenylate/guanylate cyclase 
Protein accessionYP_001312508 
Protein GI150375912 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.978534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA TCAACGACTT CCAGCGCCAG GCGATCGCCG CTCACGTGGC CCAACGACTG 
GCCGGCCCGG CTCGGGCGAT ACTGAGCTTC CAGGAACTGC TGATTGAGCA GGCGCGGGAT
CTCGGCTTGC TCCATACCAA GAGCGACATC GACCGGATCG GCGCCGCAGC AAGGCAACTG
AACAATCTGA TCGATAGCCT TCTCGATGGA ACTGCCTGCT CTCTGAAGGA AGGAGCAGCG
GAGGCGGAGG CAAGGTTCCG TCACGATCTG CGCACGCCGC TCAACGCCAT AATCGGTTAT
TCCGAAATGA TTCTCGAAGA GGCAAGGGAT TCGCAGCAGC ATGCGCTGAC AGAGGATCTC
CAGGTCATAC TCTCGGCGGC CGCCGAGCTT CTGAAGCAGG TCGACGCGAT CGCCAGTCTT
TCGCGTGGGG AGGTCGCAGA GGTGCTTCAA CCGGAGGAGC GGGTCGACAT TGACGCGGCC
GGGCTCGAAC GGCTCCTGTC GACAGCCGAA CAGACGGCAT TGCCGGACAG GGTCGGCAGA
ATTCTCGTCG TTGACGACGT GGCAAGCAAT CGTGATCTTC TTTCCCGACG GCTTCGACGT
GAGGGCCATC GGGTGGTCAC CGCCGAATCC GGACGATCCG CGCTGGCAAG ACTGGCCGAA
GAGGAGTTCG ATCTCATCCT GCTCGACATT CTCATGCCCG ATATGAACGG CATCCAGATG
CTTTCGCGAT TGAAGTCCGA GGGGCGATGG CAGCACATCC CGGTGATCAT GATATCGGGC
CTGAGCGAAG TCACCGCGGT AGCCCGATGC ATCGAGGCCG GCGCCGACGA TTATCTGACC
AAGCCCTTCA ACCCGATACT TCTGCGCGCA CGGATCAATT CGACCCTCGA AAAGAAGCGC
TGGCTCGACC GGGAGCACCG CTATCTTCAG CAGATAGAAG CGGAAAAGTC GCGGGCGGAT
TCGCTCATTC GCGCGATTCT GCCGGACCAG ATCGTTTCGC GGCTGCAGAA CGGGGAAGAG
ATCATCGCCG ACCGCTTCGA AGAAGTTTCC ATTCTGTTCG CGGATATTGT GGGCTTTTCG
CCCATTGCGG CAAGGCTGAC TCCGTCCGAT CTTGTCAGAT GCCTCGACCG TATGTTCAGA
CAGTTCGATT TGCTGACCGA GCAGCACGGC GTTGAGAAGA TCAAGACCAT CGGAGACTCC
TATATGGCCG CCTGCGGGAT CCCCGAGCCT ACAACGGATC ACGCCGACAG GATCGTGGCT
CTCGGAAAGT CCATGCTGAG ATCGTTGCGC GACATGGAGC CCGAGCAGGA GCGCTTCCGG
ATTCGGATCG GGATCCATTC AGGGCCGGTC GTTGCCGGGC TGATCGGACG ACTACGGTTC
GTTTACGACG TGTGGGGTGA AACGGTGAAC ATCGCGAGCC GGCTCGAATC CCAGGGTGTG
CCTGACGGCA TACAGATATC GGACGCGACG CGGCGCGCGC TTCAGGGGCA GTGGGCGCTC
GACCGGCGCT CTGCCCAGAA CCTGCGAGGC ATCGGCGCAG TCGAGACCTT TCTTGTTCGG
TGA
 
Protein sequence
MTAINDFQRQ AIAAHVAQRL AGPARAILSF QELLIEQARD LGLLHTKSDI DRIGAAARQL 
NNLIDSLLDG TACSLKEGAA EAEARFRHDL RTPLNAIIGY SEMILEEARD SQQHALTEDL
QVILSAAAEL LKQVDAIASL SRGEVAEVLQ PEERVDIDAA GLERLLSTAE QTALPDRVGR
ILVVDDVASN RDLLSRRLRR EGHRVVTAES GRSALARLAE EEFDLILLDI LMPDMNGIQM
LSRLKSEGRW QHIPVIMISG LSEVTAVARC IEAGADDYLT KPFNPILLRA RINSTLEKKR
WLDREHRYLQ QIEAEKSRAD SLIRAILPDQ IVSRLQNGEE IIADRFEEVS ILFADIVGFS
PIAARLTPSD LVRCLDRMFR QFDLLTEQHG VEKIKTIGDS YMAACGIPEP TTDHADRIVA
LGKSMLRSLR DMEPEQERFR IRIGIHSGPV VAGLIGRLRF VYDVWGETVN IASRLESQGV
PDGIQISDAT RRALQGQWAL DRRSAQNLRG IGAVETFLVR