Gene Bpro_1814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1814 
Symbol 
ID4015524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1878092 
End bp1879792 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content59% 
IMG OID637941484 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_548646 
Protein GI91787694 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000267062 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTTCTG CTGAGCCCTC TCCAGTTGCT TCACCCGCTC CACCCGCGCA CATCCTGATC 
GCAGAAGACA GTGGCGTGCA GGCCTACATG CTGCGCCGCC TCCTCGAAGA AGAAGGCTAC
GCAACCAGCG TTGCGAAAAA CGGCCGGCTC GCCCTGGAAC TGGCTGCCCG GATACGCCCC
TCACTGCTTG TCAGCGACGT CAACATGCCG GAGATGAGCG GCTACGAGCT GTGCCGGCAG
ATCAAGGCCA ACCCCGATCT TTGCCATATT CCGGTGATTC TGGTGACCAA CCTGTCGGAC
CCCGATGACG TGTTGCTCGG GCTCAAAAGC GGCGCTGACA GCTTTGTCAT CAAACCCTAT
GACCGAACCC ATATGCTGGC GCGCGTGCAG CATGCGCTCA GCAACCAGCA CCTTCGCTCC
ACCGCAGAAG AAGGCCCGGG GGTGGAGATC TCCTTCCATG GCGAGAAGCA CCAGATTACG
GCCAGCCGTG CCCAAATCCT CAACCTGCTG ATGTCGACTT ACGAAACCAC CGCCCAGCGC
AACAGGGAAC TTCACGAAAG CCGTGAGGAA CTGGCCAAAC GCACCACCGA GCTGCTGGCG
GCAAACCGTT TCCTCGACTC GATCATCGAG AACATTCCGA ACATGATCTT TATCAAGGAT
GCTGCGGAAT TGAAGTTTGT CAGGCTCAAT CGGGCGGGCG AGAACCTGCT TGGTTATTCG
CGCGACCAGT TGCTCGGAAA AAGTGACCAT GACTTCTTCC CCAAGAATGA GAGCGATCAT
TTTGTGGCCA GGGAGCGCGA GGTGCTGGCC AGCGGAAAAG TCTTGGAAAT CGCTGAGGAG
CCCGTGCAGA CGGCCAACAA GGGGATACGC CTGCTTCGCA CCAAGAAGGT GGCGGTGCTC
GGCGAGAACG GCCTAGCGAC TCACCTCCTG GGAATTTCCG AGGATATTAC CCAGCAAAAG
GAAATGGAAA AGGAAATCCT CAACCTCAAT GCGATTTTGA AGGCTCGCGC TGAAGAACTG
GAAGCCAGTC ACAAAAGCCT GGAAAGCTTT ACGTCCGCAG CGACGCACGA CCTTCGCTCG
CCACTGAGCA TCATCGGCGG CTATGCCGGC CTGCTGGAGA AAAATTACGC CAGCCGGCTG
GACGAAAAGG GTCAGCGCTA TGTGTCGATC ATCCGGGACA ATATCAAAGG CATGGCCAAA
CTGATTGACG ACCTGCTGGC CTTCTCCAAG CTGGGCCAGC GCGAGATCAG CAAAGCCAGT
GTGAACATGC ATGGACTGGC CCAACAGGTC ATCGAAGAAC TCCTGCAACG CCATCCGGAG
GGCAGCAAAC CACGCGTCGT CCTGGAGTCG CTGCCGCCGG CGCAGGCAGA CGCTTCGCTG
CTGCGCCAGG TCTGGGTGAA CCTGCTGTCC AACGCCGTGA AGTACAGCAG TCGCACACCC
AACCCCCTGA TCGAAATCAG TGGCCGCATA GACGGCGCGG AGGCCGTTTA TTCGGTGCGT
GACAACGGCG CCGGCTTCAG CATGGACCAC TACGACAAAC TCTTCGAAAT ATTTCAGCGA
CTGCACACCG ACGAGGAGTT TGAAGGGAAC GGGGTGGGCT TGCCCATCGT CCAGCGCGTG
GTGACCCGGC ATGGCGGCCG CGTGTGGGCC GAGGGCAAGG TGGGTCAGGG TGCGGTGTTT
CATTTTGCGC TGCCCGTATA G
 
Protein sequence
MPSAEPSPVA SPAPPAHILI AEDSGVQAYM LRRLLEEEGY ATSVAKNGRL ALELAARIRP 
SLLVSDVNMP EMSGYELCRQ IKANPDLCHI PVILVTNLSD PDDVLLGLKS GADSFVIKPY
DRTHMLARVQ HALSNQHLRS TAEEGPGVEI SFHGEKHQIT ASRAQILNLL MSTYETTAQR
NRELHESREE LAKRTTELLA ANRFLDSIIE NIPNMIFIKD AAELKFVRLN RAGENLLGYS
RDQLLGKSDH DFFPKNESDH FVAREREVLA SGKVLEIAEE PVQTANKGIR LLRTKKVAVL
GENGLATHLL GISEDITQQK EMEKEILNLN AILKARAEEL EASHKSLESF TSAATHDLRS
PLSIIGGYAG LLEKNYASRL DEKGQRYVSI IRDNIKGMAK LIDDLLAFSK LGQREISKAS
VNMHGLAQQV IEELLQRHPE GSKPRVVLES LPPAQADASL LRQVWVNLLS NAVKYSSRTP
NPLIEISGRI DGAEAVYSVR DNGAGFSMDH YDKLFEIFQR LHTDEEFEGN GVGLPIVQRV
VTRHGGRVWA EGKVGQGAVF HFALPV