| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_1814 |
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| Symbol | |
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| ID | 4015524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 1878092 |
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| End bp | 1879792 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637941484 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_548646 |
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| Protein GI | 91787694 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000267062 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTTCTG CTGAGCCCTC TCCAGTTGCT TCACCCGCTC CACCCGCGCA CATCCTGATC
GCAGAAGACA GTGGCGTGCA GGCCTACATG CTGCGCCGCC TCCTCGAAGA AGAAGGCTAC
GCAACCAGCG TTGCGAAAAA CGGCCGGCTC GCCCTGGAAC TGGCTGCCCG GATACGCCCC
TCACTGCTTG TCAGCGACGT CAACATGCCG GAGATGAGCG GCTACGAGCT GTGCCGGCAG
ATCAAGGCCA ACCCCGATCT TTGCCATATT CCGGTGATTC TGGTGACCAA CCTGTCGGAC
CCCGATGACG TGTTGCTCGG GCTCAAAAGC GGCGCTGACA GCTTTGTCAT CAAACCCTAT
GACCGAACCC ATATGCTGGC GCGCGTGCAG CATGCGCTCA GCAACCAGCA CCTTCGCTCC
ACCGCAGAAG AAGGCCCGGG GGTGGAGATC TCCTTCCATG GCGAGAAGCA CCAGATTACG
GCCAGCCGTG CCCAAATCCT CAACCTGCTG ATGTCGACTT ACGAAACCAC CGCCCAGCGC
AACAGGGAAC TTCACGAAAG CCGTGAGGAA CTGGCCAAAC GCACCACCGA GCTGCTGGCG
GCAAACCGTT TCCTCGACTC GATCATCGAG AACATTCCGA ACATGATCTT TATCAAGGAT
GCTGCGGAAT TGAAGTTTGT CAGGCTCAAT CGGGCGGGCG AGAACCTGCT TGGTTATTCG
CGCGACCAGT TGCTCGGAAA AAGTGACCAT GACTTCTTCC CCAAGAATGA GAGCGATCAT
TTTGTGGCCA GGGAGCGCGA GGTGCTGGCC AGCGGAAAAG TCTTGGAAAT CGCTGAGGAG
CCCGTGCAGA CGGCCAACAA GGGGATACGC CTGCTTCGCA CCAAGAAGGT GGCGGTGCTC
GGCGAGAACG GCCTAGCGAC TCACCTCCTG GGAATTTCCG AGGATATTAC CCAGCAAAAG
GAAATGGAAA AGGAAATCCT CAACCTCAAT GCGATTTTGA AGGCTCGCGC TGAAGAACTG
GAAGCCAGTC ACAAAAGCCT GGAAAGCTTT ACGTCCGCAG CGACGCACGA CCTTCGCTCG
CCACTGAGCA TCATCGGCGG CTATGCCGGC CTGCTGGAGA AAAATTACGC CAGCCGGCTG
GACGAAAAGG GTCAGCGCTA TGTGTCGATC ATCCGGGACA ATATCAAAGG CATGGCCAAA
CTGATTGACG ACCTGCTGGC CTTCTCCAAG CTGGGCCAGC GCGAGATCAG CAAAGCCAGT
GTGAACATGC ATGGACTGGC CCAACAGGTC ATCGAAGAAC TCCTGCAACG CCATCCGGAG
GGCAGCAAAC CACGCGTCGT CCTGGAGTCG CTGCCGCCGG CGCAGGCAGA CGCTTCGCTG
CTGCGCCAGG TCTGGGTGAA CCTGCTGTCC AACGCCGTGA AGTACAGCAG TCGCACACCC
AACCCCCTGA TCGAAATCAG TGGCCGCATA GACGGCGCGG AGGCCGTTTA TTCGGTGCGT
GACAACGGCG CCGGCTTCAG CATGGACCAC TACGACAAAC TCTTCGAAAT ATTTCAGCGA
CTGCACACCG ACGAGGAGTT TGAAGGGAAC GGGGTGGGCT TGCCCATCGT CCAGCGCGTG
GTGACCCGGC ATGGCGGCCG CGTGTGGGCC GAGGGCAAGG TGGGTCAGGG TGCGGTGTTT
CATTTTGCGC TGCCCGTATA G
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| Protein sequence | MPSAEPSPVA SPAPPAHILI AEDSGVQAYM LRRLLEEEGY ATSVAKNGRL ALELAARIRP
SLLVSDVNMP EMSGYELCRQ IKANPDLCHI PVILVTNLSD PDDVLLGLKS GADSFVIKPY
DRTHMLARVQ HALSNQHLRS TAEEGPGVEI SFHGEKHQIT ASRAQILNLL MSTYETTAQR
NRELHESREE LAKRTTELLA ANRFLDSIIE NIPNMIFIKD AAELKFVRLN RAGENLLGYS
RDQLLGKSDH DFFPKNESDH FVAREREVLA SGKVLEIAEE PVQTANKGIR LLRTKKVAVL
GENGLATHLL GISEDITQQK EMEKEILNLN AILKARAEEL EASHKSLESF TSAATHDLRS
PLSIIGGYAG LLEKNYASRL DEKGQRYVSI IRDNIKGMAK LIDDLLAFSK LGQREISKAS
VNMHGLAQQV IEELLQRHPE GSKPRVVLES LPPAQADASL LRQVWVNLLS NAVKYSSRTP
NPLIEISGRI DGAEAVYSVR DNGAGFSMDH YDKLFEIFQR LHTDEEFEGN GVGLPIVQRV
VTRHGGRVWA EGKVGQGAVF HFALPV
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