| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0483 |
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| Symbol | |
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| ID | 4250907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 553278 |
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| End bp | 554852 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638117042 |
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| Product | response regulator receiver sensor signal transduction histidine kinase |
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| Protein accession | YP_732620 |
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| Protein GI | 113968827 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTAG GTCAGATGCA GTGTTTGATT GTTGAGGATA TGGATGCCCT GCGTAAGATT
ATGGCCGAGC AGCTGCGGCA ACTCGGTTTT GGTCAGGTGT TACAGGCCGA TTGTGGTCGC
CAAGCCTTGG ATGTCTTACA GCGTCATCAG ATCGAGTTGT TGCTGCTGGA TTGGAGTATG
CCCGATGGTG ATGGCCAAGA GTTACTCGAG AACTTGCGCC AACAGGAAAA ATGGCGGGAG
TTACCCATTA TCTTAGTGAC GGCTAATGCC CATCGAGGCT TGGTAGACGC GGCGCTGAAG
TACGGGGTCT CAGACATTAT TGCGAAGCCC TTTAACTCCA AAACCTTGCA GGCGAGAGTG
TTACAGGCTC TTACGCGCCG GCATAAGCGG GCTAAGTCTG TTCCGACTTT GCCCATAGCT
TCTAATGCTG CAGTAACGCC AATGTCCGAA CCCTCATCAG CAATGAATGT GGTGCTGGTG
GTCGATGATA TGCCGGATAA TCTGGCCTTT ATGGCGGGAC TCTTAAACGA CGAATACAAG
GTGCTATTTG CTAAGGACGG TAAAGCGGCA CTCAAAATTT GCCAATCAAC AACGCCGCCC
GATGCGGTGT TGTTAGATGT GATGATGCCC GAAATGGACG GACACCAAGT GCTGCAAGCC
TTGAGATCTG AGCCTAAATC GGCGCAGATC CCAGTGATTT TTGTCAGCGC CCTCGGCGAG
GTTGAGCATC ATCTACAGGG GCTTAGAGGC GGCGCTATCG ACTATCTTAA TAAACCAGTG
CAGCCGGAGA TCTTAAAGCT CAAACTGGCG AATGTGCTAG CACAAATGCA GCGCCAGCGG
ACATTACAGC AAGAGTGCGA CGAGATGCAG CGGCTTGCGC GACTAAAGGA CAGTGCCGAT
GGCATCATGA GCCACGATCT TAAAAATCCG CTGGTGACCA TCAGCGCGCT GGCGCAAAAA
CTCGCGCAGG ATAAAAGCTG TCCTAAGGAC TGGTTACCCA AGATTAATTT GGTCGATGAG
CTGGCCTTAC AGTCGATTAA TACGGTGAAT TTGACCTCGG ATATTCTGCG TATCGAGGCG
GGGCAATATG CCTTGGATGC CGAGTGGTTT TCAGTGCATG AAATGCTGAA GCAATTGCTA
CAGGCGGCGC AGGTCAACTT TCACAGCAAA CAGTTAGTGG CGTATCTGTT GCCCGATGAA
GACCCCAACA GTCAATTCGA TGTGATAGGC GATCCTAAAC TCTGCCATCC CATGTTGTTC
AATCTGATTA AAAATGCCTT CGAGGCGGCG CGAGCTAAGA CTAAAGTGGC GATTTCGCTG
ATGCGTCAAG AAGGCGAAGT GCTGATCGCT ATCGAAAACA CTGGTGTCGT GCCCGTCGAT
ATCCGTGAGC AGTTTTGGGA AAAGTATGTC ACTCAAGGTA AGAGTGAGGG CTTAGGCATT
GGCACCTATG CGGCACGTTT GTTTGCAAGG GCGCAAAAGG GCGAGGCTAA TCTCGTGGTG
GATGACACTA AGTTACTGAC TCGAGTTGAA ATCCGCCTAC CCGCGGCCAT AGATGCCATC
GTCGCCGAGG AATAA
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| Protein sequence | MQLGQMQCLI VEDMDALRKI MAEQLRQLGF GQVLQADCGR QALDVLQRHQ IELLLLDWSM
PDGDGQELLE NLRQQEKWRE LPIILVTANA HRGLVDAALK YGVSDIIAKP FNSKTLQARV
LQALTRRHKR AKSVPTLPIA SNAAVTPMSE PSSAMNVVLV VDDMPDNLAF MAGLLNDEYK
VLFAKDGKAA LKICQSTTPP DAVLLDVMMP EMDGHQVLQA LRSEPKSAQI PVIFVSALGE
VEHHLQGLRG GAIDYLNKPV QPEILKLKLA NVLAQMQRQR TLQQECDEMQ RLARLKDSAD
GIMSHDLKNP LVTISALAQK LAQDKSCPKD WLPKINLVDE LALQSINTVN LTSDILRIEA
GQYALDAEWF SVHEMLKQLL QAAQVNFHSK QLVAYLLPDE DPNSQFDVIG DPKLCHPMLF
NLIKNAFEAA RAKTKVAISL MRQEGEVLIA IENTGVVPVD IREQFWEKYV TQGKSEGLGI
GTYAARLFAR AQKGEANLVV DDTKLLTRVE IRLPAAIDAI VAEE
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