191 homologs were found in PanDaTox collection
for query gene Cyan7425_4331 on replicon NC_011884
Organism: Cyanothece sp. PCC 7425



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011884  Cyan7425_4331  TRAP transporter solute receptor, TAXI family  100 
 
 
453 aa  921    Cyanothece sp. PCC 7425  Bacteria  normal  0.794472  normal 
 
 
-
 
NC_011729  PCC7424_4573  TRAP transporter solute receptor, TAXI family  36.75 
 
 
446 aa  285  2.0000000000000002e-75  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_4597  TRAP transporter solute receptor, TAXI family  36.54 
 
 
454 aa  282  1e-74  Cyanothece sp. PCC 7425  Bacteria  normal  0.244351  normal 
 
 
-
 
NC_011894  Mnod_0342  TRAP transporter solute receptor, TAXI family  26.75 
 
 
423 aa  127  5e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0450847  n/a   
 
 
-
 
NC_010511  M446_2265  TRAP transporter solute receptor TAXI family protein  28.22 
 
 
442 aa  124  3e-27  Methylobacterium sp. 4-46  Bacteria  normal  decreased coverage  0.00194673 
 
 
-
 
NC_011004  Rpal_0409  TRAP transporter solute receptor, TAXI family  24.29 
 
 
462 aa  122  9.999999999999999e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.309942  n/a   
 
 
-
 
NC_007778  RPB_0100  TRAP transporter solute receptor TAXI family protein  22.74 
 
 
480 aa  116  6e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0702  TRAP transporter solute receptor TAXI family protein  23.31 
 
 
480 aa  115  2.0000000000000002e-24  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.871087  normal 
 
 
-
 
NC_011757  Mchl_0184  TRAP-type uncharacterized transport system periplasmic component-like protein  25.41 
 
 
453 aa  105  1e-21  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.864216  normal  0.611675 
 
 
-
 
NC_011666  Msil_3025  TRAP transporter solute receptor, TAXI family  23.38 
 
 
441 aa  105  2e-21  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010172  Mext_0239  TRAP-type uncharacterized transport system periplasmic component-like protein  25.41 
 
 
453 aa  104  3e-21  Methylobacterium extorquens PA1  Bacteria  normal  0.264256  normal 
 
 
-
 
NC_010505  Mrad2831_5654  TRAP-type uncharacterized transport system periplasmic component-like protein  26.02 
 
 
471 aa  103  9e-21  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2087  hypothetical protein  24.3 
 
 
466 aa  99  1e-19  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.073016  n/a   
 
 
-
 
NC_007925  RPC_2525  TRAP transporter solute receptor TAXI family protein  23.96 
 
 
486 aa  99.4  1e-19  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.839724  normal  0.154925 
 
 
-
 
NC_009485  BBta_0249  hypothetical protein  22.22 
 
 
448 aa  99.4  1e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6537  hypothetical protein  21.65 
 
 
467 aa  99.4  1e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.866176  normal 
 
 
-
 
NC_007204  Psyc_0746  TRAP-T family transporter periplasmic substrate binding subunit  28.05 
 
 
344 aa  97.8  3e-19  Psychrobacter arcticus 273-4  Bacteria  normal  0.842378  normal 
 
 
-
 
NC_008554  Sfum_3723  TRAP transporter solute receptor TAXI family protein  26.78 
 
 
316 aa  97.4  5e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0909  hypothetical protein  22.97 
 
 
491 aa  96.7  8e-19  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_0107  TRAP-type uncharacterized transport system periplasmic component-like protein  25 
 
 
453 aa  96.7  8e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2036  TRAP-type uncharacterized transport system periplasmic component-like protein  23.38 
 
 
463 aa  96.7  8e-19  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00372211 
 
 
-
 
NC_007969  Pcryo_0741  TRAP transporter solute receptor TAXI family protein  27.1 
 
 
348 aa  95.1  2e-18  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_3213  TRAP transporter solute receptor TAXI family protein  26.26 
 
 
325 aa  92.4  1e-17  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4219  TRAP-type uncharacterized transport system periplasmic component-like protein  24.54 
 
 
465 aa  92  2e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.340628 
 
 
-
 
NC_011894  Mnod_0519  TRAP-type uncharacterized transport system periplasmic component-like protein  23.38 
 
 
463 aa  91.7  3e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1697  TRAP transporter solute receptor TAXI family protein  27.41 
 
 
330 aa  90.5  6e-17  Salinispora tropica CNB-440  Bacteria  normal  0.607751  normal  0.828936 
 
 
-
 
NC_009767  Rcas_4417  TRAP transporter solute receptor TAXI family protein  25.82 
 
 
348 aa  90.1  8e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0674202 
 
 
-
 
NC_009953  Sare_1695  TRAP transporter solute receptor TAXI family protein  28.09 
 
 
315 aa  89.4  1e-16  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.000228802 
 
 
-
 
NC_010505  Mrad2831_3542  TRAP-type uncharacterized transport system periplasmic component-like protein  23.61 
 
 
472 aa  88.6  2e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.919124 
 
 
-
 
NC_009654  Mmwyl1_1764  TRAP transporter solute receptor TAXI family protein  26.37 
 
 
323 aa  87.8  4e-16  Marinomonas sp. MWYL1  Bacteria  normal  0.513988  normal 
 
 
-
 
NC_010725  Mpop_2259  TRAP-type uncharacterized transport system periplasmic component-like protein  23.7 
 
 
469 aa  87.4  5e-16  Methylobacterium populi BJ001  Bacteria  normal  0.466386  normal  0.36502 
 
 
-
 
NC_009783  VIBHAR_02419  hypothetical protein  25.5 
 
 
323 aa  87.4  5e-16  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_3440  TRAP transporter solute receptor TAXI family protein  25.72 
 
 
342 aa  87.4  5e-16  Roseiflexus sp. RS-1  Bacteria  normal  0.93321  normal  0.103466 
 
 
-
 
NC_014150  Bmur_0797  TRAP transporter solute receptor, TAXI family  24.75 
 
 
318 aa  86.7  9e-16  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.00000423237  n/a   
 
 
-
 
NC_007778  RPB_3495  hypothetical protein  22.45 
 
 
465 aa  85.9  0.000000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0899  hypothetical protein  22.4 
 
 
437 aa  85.1  0.000000000000002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.727607  normal  0.541745 
 
 
-
 
NC_010172  Mext_2302  TRAP-type uncharacterized transport system periplasmic component-like protein  22.77 
 
 
474 aa  85.1  0.000000000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.172272  hitchhiker  0.00762339 
 
 
-
 
NC_011757  Mchl_2577  TRAP-type uncharacterized transport system periplasmic component-like protein  22.49 
 
 
469 aa  84.7  0.000000000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.301233 
 
 
-
 
NC_008740  Maqu_2063  TRAP transporter solute receptor TAXI family protein  25.5 
 
 
327 aa  84.7  0.000000000000003  Marinobacter aquaeolei VT8  Bacteria  normal  0.800081  n/a   
 
 
-
 
NC_013946  Mrub_1635  TAXI family TRAP transporter solute receptor  28.52 
 
 
315 aa  85.1  0.000000000000003  Meiothermus ruber DSM 1279  Bacteria  normal  0.0832335  normal 
 
 
-
 
NC_010511  M446_1581  TRAP transporter solute receptor TAXI family protein  23.71 
 
 
457 aa  84.3  0.000000000000004  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.193293 
 
 
-
 
NC_013456  VEA_003379  immunogenic protein  25.83 
 
 
323 aa  84.3  0.000000000000004  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3688  hypothetical protein  25.75 
 
 
324 aa  84  0.000000000000005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.269569 
 
 
-
 
NC_009438  Sputcn32_3381  TRAP transporter solute receptor TAXI family protein  25.47 
 
 
318 aa  84  0.000000000000005  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4743  TRAP-type uncharacterized transport system periplasmic component-like protein  25.77 
 
 
457 aa  83.6  0.000000000000007  Methylobacterium sp. 4-46  Bacteria  normal  0.704005  normal 
 
 
-
 
NC_009997  Sbal195_4024  TRAP transporter solute receptor TAXI family protein  25.79 
 
 
318 aa  83.6  0.000000000000008  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0433  TRAP transporter solute receptor TAXI family protein  25.79 
 
 
318 aa  83.6  0.000000000000008  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3828  TRAP transporter solute receptor, TAXI family  25.79 
 
 
318 aa  83.6  0.000000000000008  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3901  TRAP transporter solute receptor TAXI family protein  25.79 
 
 
318 aa  83.6  0.000000000000008  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0033  TRAP transporter solute receptor, TAXI family  24.61 
 
 
319 aa  82.8  0.00000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1063  TRAP transporter solute receptor TAXI family protein  26.25 
 
 
317 aa  82.4  0.00000000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_009439  Pmen_2949  TRAP transporter solute receptor TAXI family protein  26.96 
 
 
318 aa  82.8  0.00000000000001  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0733999 
 
 
-
 
NC_009457  VC0395_A2848  immunogenic protein  24.5 
 
 
328 aa  82.4  0.00000000000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0817  TRAP transporter solute receptor, TAXI family  26.85 
 
 
318 aa  82.4  0.00000000000002  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  unclonable  0.0000000102609  n/a   
 
 
-
 
NC_007958  RPD_1959  hypothetical protein  20.98 
 
 
467 aa  80.5  0.00000000000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2797  TRAP-type uncharacterized transport system periplasmic component-like protein  21.29 
 
 
485 aa  80.1  0.00000000000007  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009620  Smed_3839  TRAP transporter solute receptor TAXI family protein  25.08 
 
 
327 aa  79  0.0000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.0135422  normal 
 
 
-
 
NC_007643  Rru_A0608  TRAP transporter solute receptor TAXI family protein  26.47 
 
 
326 aa  78.2  0.0000000000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.516133  n/a   
 
 
-
 
NC_007908  Rfer_1635  TRAP transporter solute receptor TAXI family protein  25.68 
 
 
319 aa  77.8  0.0000000000003  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00793  hypothetical protein  24.33 
 
 
322 aa  78.2  0.0000000000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_1556  TRAP transporter solute receptor TAXI family protein  25.81 
 
 
328 aa  77.8  0.0000000000004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4512  TRAP transporter solute receptor, TAXI family  25.57 
 
 
299 aa  77.4  0.0000000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1040  TRAP transporter solute receptor TAXI family protein  25.25 
 
 
324 aa  77  0.0000000000007  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_0539  immunogenic protein  25.08 
 
 
313 aa  76.6  0.0000000000009  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0082  immunogenic protein  26.54 
 
 
312 aa  76.6  0.0000000000009  Campylobacter curvus 525.92  Bacteria  normal  0.0148349  n/a   
 
 
-
 
NC_004347  SO_0456  immunogenic-related protein  24.83 
 
 
318 aa  75.9  0.000000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_001678  TRAP transporter solute receptor TAXI family precursor  24.67 
 
 
322 aa  76.3  0.000000000001  Vibrio sp. Ex25  Bacteria  normal  0.150837  n/a   
 
 
-
 
NC_007494  RSP_1413  TRAP-T family transporter periplasmic binding component  24.75 
 
 
324 aa  75.5  0.000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0461  TRAP transporter solute receptor TAXI family protein  25.17 
 
 
318 aa  75.1  0.000000000002  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3568  TRAP transporter solute receptor TAXI family protein  25.17 
 
 
318 aa  75.1  0.000000000002  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0457  response regulator receiver protein  25.17 
 
 
318 aa  75.1  0.000000000002  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_0314  TRAP transporter solute receptor, TAXI family  24.83 
 
 
317 aa  75.1  0.000000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.889469  n/a   
 
 
-
 
NC_009050  Rsph17029_3483  TRAP transporter solute receptor TAXI family protein  24.75 
 
 
324 aa  75.5  0.000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I0356  hypothetical protein  23.67 
 
 
324 aa  75.9  0.000000000002  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.097907  n/a   
 
 
-
 
NC_009439  Pmen_4560  TRAP transporter solute receptor TAXI family protein  26.21 
 
 
317 aa  75.1  0.000000000003  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_6347  hypothetical protein  25.25 
 
 
319 aa  74.7  0.000000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.884307  n/a   
 
 
-
 
NC_011666  Msil_2760  TRAP transporter solute receptor, TAXI family  25.7 
 
 
433 aa  74.3  0.000000000004  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_013889  TK90_1890  TRAP transporter solute receptor, TAXI family  26.97 
 
 
333 aa  74.3  0.000000000004  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.966009  normal 
 
 
-
 
NC_008345  Sfri_3566  TRAP transporter solute receptor, TAXI family protein  25.17 
 
 
317 aa  73.2  0.000000000009  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.28304  n/a   
 
 
-
 
NC_007963  Csal_2671  TRAP transporter solute receptor TAXI family protein  26.13 
 
 
325 aa  72.8  0.00000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0725  TRAP transporter solute receptor, TAXI family  25.9 
 
 
322 aa  73.2  0.00000000001  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2159  TRAP transporter solute receptor, TAXI family  25.42 
 
 
317 aa  72.4  0.00000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.239874  normal  0.13141 
 
 
-
 
NC_010511  M446_1545  TRAP-type uncharacterized transport system periplasmic component-like protein  22.29 
 
 
468 aa  72.4  0.00000000002  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_008309  HS_0380  periplasmic-binding protein  25.34 
 
 
342 aa  71.6  0.00000000003  Haemophilus somnus 129PT  Bacteria  hitchhiker  0.0000526249  n/a   
 
 
-
 
NC_008463  PA14_73120  hypothetical protein  24.92 
 
 
319 aa  70.9  0.00000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3954  periplasmic binding protein, putative  25.17 
 
 
316 aa  70.5  0.00000000006  Pseudomonas putida KT2440  Bacteria  normal  normal  0.391333 
 
 
-
 
NC_013202  Hmuk_0881  TRAP transporter solute receptor, TAXI family  27.15 
 
 
346 aa  70.5  0.00000000006  Halomicrobium mukohataei DSM 12286  Archaea  decreased coverage  0.000456072  normal  0.0650778 
 
 
-
 
NC_008686  Pden_0664  TRAP transporter solute receptor TAXI family protein  25.09 
 
 
333 aa  70.1  0.00000000007  Paracoccus denitrificans PD1222  Bacteria  normal  0.613063  normal 
 
 
-
 
NC_007643  Rru_A0137  TRAP transporter solute receptor TAXI family protein  26.19 
 
 
350 aa  70.1  0.00000000008  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.507077  n/a   
 
 
-
 
NC_009667  Oant_2429  TRAP transporter solute receptor TAXI family protein  25.08 
 
 
329 aa  70.1  0.00000000009  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.25673  n/a   
 
 
-
 
NC_008254  Meso_4067  TRAP transporter solute receptor TAXI family protein  26.44 
 
 
318 aa  69.7  0.0000000001  Chelativorans sp. BNC1  Bacteria  normal  0.548232  n/a   
 
 
-
 
NC_010581  Bind_2753  hypothetical protein  21.1 
 
 
433 aa  69.7  0.0000000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_0431  TRAP transporter solute receptor, TAXI family  22.79 
 
 
316 aa  69.7  0.0000000001  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5002  TRAP transporter solute receptor, TAXI family  25.68 
 
 
315 aa  68.6  0.0000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.117483  n/a   
 
 
-
 
NC_012029  Hlac_2329  TRAP transporter solute receptor, TAXI family  27.15 
 
 
349 aa  68.9  0.0000000002  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal  0.809783 
 
 
-
 
NC_008554  Sfum_2942  TRAP transporter solute receptor TAXI family protein  25 
 
 
345 aa  67.8  0.0000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR1194  TRAP transporter solute receptor TAXI family protein  24.5 
 
 
329 aa  67.8  0.0000000004  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2331  TRAP transporter solute receptor TAXI family protein  24.5 
 
 
322 aa  67.8  0.0000000004  Jannaschia sp. CCS1  Bacteria  normal  0.0699297  normal 
 
 
-
 
NC_008254  Meso_0177  TRAP transporter solute receptor TAXI family protein  23.65 
 
 
326 aa  66.2  0.000000001  Chelativorans sp. BNC1  Bacteria  normal  0.811435  n/a   
 
 
-
 
NC_010581  Bind_3430  TRAP transporter solute receptor TAXI family protein  23.4 
 
 
461 aa  65.1  0.000000002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.199051 
 
 
-
 
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