46 homologs were found in PanDaTox collection
for query gene BBta_6537 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009485  BBta_6537  hypothetical protein  100 
 
 		 467 aa  939    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.866176  normal  1 
 
 
-
 
NC_007964  Nham_0909  hypothetical protein  59.86 
 
 		 491 aa  474  1e-132  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_011004  Rpal_2087  hypothetical protein  51.36 
 
 		 466 aa  408  1.0000000000000001e-112  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.073016  n/a   
 
 
-
 
NC_007958  RPD_1959  hypothetical protein  51.75 
 
 		 467 aa  398  1e-109  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_3495  hypothetical protein  51.76 
 
 		 465 aa  390  1e-107  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_2525  TRAP transporter solute receptor TAXI family protein  49.16 
 
 		 486 aa  380  1e-104  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.839724  normal  0.154925 
 
 
-
 
NC_009485  BBta_0249  hypothetical protein  47.37 
 
 		 448 aa  358  9.999999999999999e-98  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_0100  TRAP transporter solute receptor TAXI family protein  42.63 
 
 		 480 aa  355  7.999999999999999e-97  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_0409  TRAP transporter solute receptor, TAXI family  43.45 
 
 		 462 aa  355  1e-96  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.309942  n/a   
 
 
-
 
NC_007958  RPD_0702  TRAP transporter solute receptor TAXI family protein  41.88 
 
 		 480 aa  351  1e-95  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.871087  normal  1 
 
 
-
 
NC_010511  M446_2265  TRAP transporter solute receptor TAXI family protein  35.46 
 
 		 442 aa  221  3e-56  Methylobacterium sp. 4-46  Bacteria  normal  1  decreased coverage  0.00194673 
 
 
-
 
NC_011894  Mnod_0342  TRAP transporter solute receptor, TAXI family  33.33 
 
 		 423 aa  196  6e-49  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0450847  n/a   
 
 
-
 
NC_011666  Msil_3025  TRAP transporter solute receptor, TAXI family  28.63 
 
 		 441 aa  155  1e-36  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010511  M446_1545  TRAP-type uncharacterized transport system periplasmic component-like protein  29.33 
 
 		 468 aa  151  3e-35  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2797  TRAP-type uncharacterized transport system periplasmic component-like protein  29.21 
 
 		 485 aa  148  2.0000000000000003e-34  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011894  Mnod_5694  TRAP-type uncharacterized transport system periplasmic component-like protein  29.61 
 
 		 477 aa  145  2e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010581  Bind_3430  TRAP transporter solute receptor TAXI family protein  27.87 
 
 		 461 aa  144  3e-33  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.199051 
 
 
-
 
NC_010581  Bind_0899  hypothetical protein  26.1 
 
 		 437 aa  142  1.9999999999999998e-32  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.727607  normal  0.541745 
 
 
-
 
NC_010511  M446_1581  TRAP transporter solute receptor TAXI family protein  29.05 
 
 		 457 aa  135  9.999999999999999e-31  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.193293 
 
 
-
 
NC_010511  M446_2036  TRAP-type uncharacterized transport system periplasmic component-like protein  24.94 
 
 		 463 aa  134  3.9999999999999996e-30  Methylobacterium sp. 4-46  Bacteria  normal  1  hitchhiker  0.00372211 
 
 
-
 
NC_011757  Mchl_0184  TRAP-type uncharacterized transport system periplasmic component-like protein  27.37 
 
 		 453 aa  131  3e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.864216  normal  0.611675 
 
 
-
 
NC_010172  Mext_0239  TRAP-type uncharacterized transport system periplasmic component-like protein  27.11 
 
 		 453 aa  129  1.0000000000000001e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.264256  normal  1 
 
 
-
 
NC_010725  Mpop_2259  TRAP-type uncharacterized transport system periplasmic component-like protein  24.63 
 
 		 469 aa  129  2.0000000000000002e-28  Methylobacterium populi BJ001  Bacteria  normal  0.466386  normal  0.36502 
 
 
-
 
NC_010505  Mrad2831_3542  TRAP-type uncharacterized transport system periplasmic component-like protein  24.83 
 
 		 472 aa  128  3e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.919124 
 
 
-
 
NC_010505  Mrad2831_5654  TRAP-type uncharacterized transport system periplasmic component-like protein  25.06 
 
 		 471 aa  125  1e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_2577  TRAP-type uncharacterized transport system periplasmic component-like protein  26.74 
 
 		 469 aa  121  3e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.301233 
 
 
-
 
NC_010172  Mext_2302  TRAP-type uncharacterized transport system periplasmic component-like protein  26.74 
 
 		 474 aa  121  3e-26  Methylobacterium extorquens PA1  Bacteria  normal  0.172272  hitchhiker  0.00762339 
 
 
-
 
NC_011894  Mnod_0519  TRAP-type uncharacterized transport system periplasmic component-like protein  26.87 
 
 		 463 aa  120  3.9999999999999996e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010581  Bind_2753  hypothetical protein  25.86 
 
 		 433 aa  119  9.999999999999999e-26  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2760  TRAP transporter solute receptor, TAXI family  26.56 
 
 		 433 aa  119  9.999999999999999e-26  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011894  Mnod_0107  TRAP-type uncharacterized transport system periplasmic component-like protein  25.97 
 
 		 453 aa  118  1.9999999999999998e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_2929  hypothetical protein  24.04 
 
 		 443 aa  111  2.0000000000000002e-23  Dechloromonas aromatica RCB  Bacteria  normal  0.0484025  normal  1 
 
 
-
 
NC_010505  Mrad2831_4219  TRAP-type uncharacterized transport system periplasmic component-like protein  25.57 
 
 		 465 aa  108  3e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.340628 
 
 
-
 
NC_011884  Cyan7425_4331  TRAP transporter solute receptor, TAXI family  22.51 
 
 		 453 aa  103  9e-21  Cyanothece sp. PCC 7425  Bacteria  normal  0.794472  normal  1 
 
 
-
 
NC_010510  Mrad2831_5881  TRAP-type uncharacterized transport system periplasmic component-like protein  23.89 
 
 		 440 aa  101  3e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.810377 
 
 
-
 
NC_010511  M446_4743  TRAP-type uncharacterized transport system periplasmic component-like protein  26.02 
 
 		 457 aa  86.7  9e-16  Methylobacterium sp. 4-46  Bacteria  normal  0.704005  normal  1 
 
 
-
 
NC_011884  Cyan7425_4597  TRAP transporter solute receptor, TAXI family  20.23 
 
 		 454 aa  84.3  0.000000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.244351  normal  1 
 
 
-
 
NC_011894  Mnod_3511  TRAP-type uncharacterized transport system periplasmic component-like protein  28.03 
 
 		 179 aa  67  0.0000000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_2418  TRAP-type uncharacterized transport system periplasmic component-like protein  31.87 
 
 		 176 aa  60.1  0.00000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_1803  TRAP transporter solute receptor TAXI family protein  28.32 
 
 		 459 aa  52.4  0.00002  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.26222 
 
 
-
 
NC_009456  VC0395_1133  immunogenic protein  22.39 
 
 		 351 aa  48.5  0.0003  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_2283  TRAP transporter solute receptor, TAXI family  33.06 
 
 		 320 aa  46.6  0.001  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1537  hypothetical protein  25.32 
 
 		 318 aa  46.2  0.001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.391308  normal  0.296954 
 
 
-
 
NC_009379  Pnuc_1509  TRAP transporter solute receptor TAXI family protein  24.62 
 
 		 433 aa  45.4  0.002  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009784  VIBHAR_06717  hypothetical protein  21.28 
 
 		 336 aa  44.3  0.004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000812  immunogenic protein  21.28 
 
 		 336 aa  43.5  0.008  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
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