| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0177 |
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| Symbol | |
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| ID | 4179738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 220601 |
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| End bp | 221581 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638066058 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_672747 |
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| Protein GI | 110632539 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.811435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCA ATCGAACACT CGGTCTTGGA CTCGCCGCGG CCATGGTCGG TACGCTCCTG
GCCGGCAATG CCGCTGCACA GGAGCAGCGT TTCGTATCGA TCGGTACGGG CGGCGTAACC
GGAGTCTACT ATCCGGTCGG TGGCGCCATA TGCCGTCTGA TGAATCAGAA CCGTCGTGAG
CATGGCGTTC GCTGTTCGGT GGAATCGACC GGCGGCTCGG TTTTCAACGT GAACGCAATC
AAGGGCGGCG ACCTGGAGTT CGGCACGGTG CAGTCGGATG TTCAATATAA TGCCTTCAAT
GGCGAGGCCG ATTTCGCCGA CGGGGGCGCG CACGAGAAGC TGCGCTCGGT ATTCTCGCTC
CATGCGGAGC CGCTGACGGT TGTGGCACGT GCCGATGCCG ACATTTCCGA CTTCGACGGC
CTCAAAGGCA AGCGGGTCAA TATCGGGAAT CCCGGCTCTG GCCAGCGTGC GCTGATGGAC
CTGCTCATTG CCGAAAAGGG CTGGACCAAT GCCGATTTTG CTCTCGCGTC GGAGCTTGCT
CCGGCGGAGC AGGCTTCCGC GCTGTGCGAT AACAACATCG ATGCCTTTGC CTACACGGTT
GGCCATCCGG CCGGCGCTAT CGAGGAGGCT ACTACGACTT GTGACAGCGT GATCGTGCCG
GTGGAAGGCG AACTGGTCGA CAAGCTGGTC GAGGAAAATC CATACTACTT CAAGGCCGTT
ATCCCAGGTG GCATGTATCG TGGCACCGAT CAGGACGTGA ACACCTTCGG CGTGGGCGCT
ACGCTGGTGA CTTCCGCAGA TGTGCCGGAG GACGTCGTTT ATACGCTGGT GAAGGCGGTC
TTCGACAATT TCGACGACTT CAAGAGCCTG CATCCGGCGC TTGCCGGCTT GACGCCCGAG
CAGATGGTCA GCCAGGGCAA TTCGGCTCCG CTCCATCCGG GTGCCGAGAA GTACTACGAG
GAAAAAGGCT GGCTCAACTA A
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| Protein sequence | MKSNRTLGLG LAAAMVGTLL AGNAAAQEQR FVSIGTGGVT GVYYPVGGAI CRLMNQNRRE
HGVRCSVEST GGSVFNVNAI KGGDLEFGTV QSDVQYNAFN GEADFADGGA HEKLRSVFSL
HAEPLTVVAR ADADISDFDG LKGKRVNIGN PGSGQRALMD LLIAEKGWTN ADFALASELA
PAEQASALCD NNIDAFAYTV GHPAGAIEEA TTTCDSVIVP VEGELVDKLV EENPYYFKAV
IPGGMYRGTD QDVNTFGVGA TLVTSADVPE DVVYTLVKAV FDNFDDFKSL HPALAGLTPE
QMVSQGNSAP LHPGAEKYYE EKGWLN
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