| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0881 |
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| Symbol | |
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| ID | 8410396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | - |
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| Start bp | 848806 |
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| End bp | 849846 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 645019216 |
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| Product | TRAP transporter solute receptor, TAXI family |
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| Protein accession | YP_003176718 |
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| Protein GI | 257386945 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000456072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0650778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGATC ACACCAGACG ACGATTCATC CGCGCGACTG GACTCGTGAG CGTTACCGCA
CTCGCCGGCT GTGCCGGCGA CGACGGCGGC GGCGGTGCGG AAGACTCACC GACGGAGACG
GGGATGGACG GCGGCGACGA GACGGCCACC GACACCGAAT CCTCTGACGG CGGCGACGGC
CAGGCCGACA CCCGCCTCTC GTGGCACGCC GGTGGGACCG GCGGCACATA CTTCCCGCTC
TCGAACGAGT TCAAGACGGT CGTCGAGGAC AACACCGACT TCACGCTGAA CGTCCAGTCG
ACGGGGGCCA GCGTCGAGAA CGTCGGCAGC CTCGCCAACG GGAACGCCGA CTTCGCGCTG
ATCCAAAACG ACATCGCGTA CTTCGCGAAG AACGGCACCG GCATCGACGC GTTCCAGGAC
AACGCCGTCG AGAACCTGCG CGGCGTCGCG ACGCTGTACC CCGAGACGAT CACGGTCGTG
ACCCTCTCCG ACACCGGCAT CTCGCAGCTG TCTGACCTCT CGGGAGCGAC GATCAACACG
GGCGATCTGG GCAGCGGCAC GCAGGTCAAC GCCAACCAGA TCCTCGAAGC CGTCGGCATC
ACCGACTTCG AGGAGCAAAA CGCCTCGTTC TCGCAGGCGG CCGACCAGCT CCGGAACGGC
GACATCGACG CCGCCTTCGT CGTCGGGGGC TGGCCGGTCG GGGCGATCGA GGATCTGGCG
ACGACCAACG ACGTCGCGAT CGTCCCCATC GACGGCGACA ACCGCACGGC GGTCAAGGAC
GCGGCGTCGT GGTTCGCGGA CGACACCATC CCGGGCGGGA CGTACTCGGG CGTCTCCGAA
GACGTGGAGA CGGTCGCCGT CCAGGCGATG ATCGCGACCA ACGCCGACGT GCCCGAAGCG
ACGGTCGAGA CGGTGACGGC CGCGATCTTC GACAACGTCG ACGCGCTGAC GATCAAGACG
GAGTTCATCG GCGTCGACTC GGCGCAGGAC GGGATGTCGA TCGAGCTCCA TCCCGGCGCT
GCGGCCTACT TCGACGCCTG A
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| Protein sequence | MGDHTRRRFI RATGLVSVTA LAGCAGDDGG GGAEDSPTET GMDGGDETAT DTESSDGGDG
QADTRLSWHA GGTGGTYFPL SNEFKTVVED NTDFTLNVQS TGASVENVGS LANGNADFAL
IQNDIAYFAK NGTGIDAFQD NAVENLRGVA TLYPETITVV TLSDTGISQL SDLSGATINT
GDLGSGTQVN ANQILEAVGI TDFEEQNASF SQAADQLRNG DIDAAFVVGG WPVGAIEDLA
TTNDVAIVPI DGDNRTAVKD AASWFADDTI PGGTYSGVSE DVETVAVQAM IATNADVPEA
TVETVTAAIF DNVDALTIKT EFIGVDSAQD GMSIELHPGA AAYFDA
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