| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0725 |
|---|
| Symbol | |
|---|
| ID | 7083954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 809774 |
|---|
| End bp | 810742 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643697751 |
|---|
| Product | TRAP transporter solute receptor, TAXI family |
|---|
| Protein accession | YP_002354393 |
|---|
| Protein GI | 217969159 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAC TGACTGCCCT GGCTGCCGCC TTCGCAATCG CCGGCTCGCT CGGCGCCGCC
CCCGCGCACG CCCAGCAGAA GTTCATCACG ATCGGTACCG GGGGTGTGAC GGGCGTCTAT
TACGCCGCGG GCGGCGCGAT TTGCCGCCTG ATCAACAAGG ACCGCGCCCA GCACGGCGTG
CGCTGCTCGG TCGAAAGCAC CGGCGGTTCG GTGTACAACG TGAATACCAT CAAGGCCGGC
GAACTCGACT TCGGCGTCTC GCAGTCGGAC ATCCAGTACA ACGCGCTCAA GGGCGAGGTC
CAGTTCAAGG ACGGCGGCGC CTTCGCAGAC CTGCGCTCGG TGTTCTCGCT GCATGGCGAG
CCGCTGACCG TGCTGGCGCG CAAGGAAGCC AACATCGGCA AGATGGAGGA CTTCAAGGGC
AAGCGCTTCA ACATCGGCAA CCCGGGTTCG GGCCAGCGCG CGACCCTCGA GGTGCTTCTG
CCGGCGATGG GCATGAGCTT CGCCGACTTC TCGCTCGCCT CCGAGCTCAA GCCCGACGAG
CACGGCGCCG CGCTATGCGA CAACAAGATC GACGGCTTCG CCTTCGTGGT CGGCCACCCG
GCGGCCAACA TCCAGGATCC GACCACCACC TGCGGCGCCA AGCTGGTGCC GATCACCGGC
GCGGGCGTGG ACAAGATCCT CGCCCAGTAC CCCTACTTCG CTCCGGTCAC CATCCCGGGC
GGCATGTATG CCAACAACCC GGATGCGACC AAGACCTTCG GCGTGGTGGC GAGCATCGTG
ACCTCGGCCA AGGTGCCGGT GGAGTCGGTC TACATCATGG TCAAGGCGGT GTTCGAGAAC
TTCGAGGACT TCAAGAAGCT GCACCCGGCC TTCGCCAACC TGCAGCCGCA GGACATGATC
AAGAACGGCA TGTCGGCCCC GCTGCACGAG GGCGCGGTGA AGTACTACAA GGAAAAGGGC
TGGATGTAA
|
|---|
| Protein sequence | MKRLTALAAA FAIAGSLGAA PAHAQQKFIT IGTGGVTGVY YAAGGAICRL INKDRAQHGV
RCSVESTGGS VYNVNTIKAG ELDFGVSQSD IQYNALKGEV QFKDGGAFAD LRSVFSLHGE
PLTVLARKEA NIGKMEDFKG KRFNIGNPGS GQRATLEVLL PAMGMSFADF SLASELKPDE
HGAALCDNKI DGFAFVVGHP AANIQDPTTT CGAKLVPITG AGVDKILAQY PYFAPVTIPG
GMYANNPDAT KTFGVVASIV TSAKVPVESV YIMVKAVFEN FEDFKKLHPA FANLQPQDMI
KNGMSAPLHE GAVKYYKEKG WM
|
|---|
| |