More than 300 homologs were found in PanDaTox collection
for query gene Cpin_6821 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_6821  two component transcriptional regulator, LuxR family  100 
 
 		 225 aa  456  1e-127  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.121688  normal  0.121136 
 
 
-
 
NC_013132  Cpin_0010  two component transcriptional regulator, LuxR family  46.48 
 
 		 219 aa  205  5e-52  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009441  Fjoh_2973  two component LuxR family transcriptional regulator  40.19 
 
 		 216 aa  175  4e-43  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_1556  two component transcriptional regulator, LuxR family  36.36 
 
 		 222 aa  162  6e-39  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_4294  two component transcriptional regulator, LuxR family  40 
 
 		 218 aa  160  2e-38  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.81327  normal  0.0351026 
 
 
-
 
NC_013132  Cpin_5476  two component transcriptional regulator, LuxR family  31.96 
 
 		 219 aa  136  3.0000000000000003e-31  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.21854 
 
 
-
 
NC_009441  Fjoh_0036  two component LuxR family transcriptional regulator  34.43 
 
 		 221 aa  135  4e-31  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0464925  n/a   
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  34.58 
 
 		 211 aa  135  5e-31  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_5845  two component transcriptional regulator, LuxR family  29.55 
 
 		 219 aa  132  3.9999999999999996e-30  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.715181 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  31.94 
 
 		 222 aa  132  5e-30  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  31.65 
 
 		 244 aa  130  2.0000000000000002e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  33.97 
 
 		 213 aa  130  2.0000000000000002e-29  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  32.55 
 
 		 228 aa  129  5.0000000000000004e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  30.7 
 
 		 220 aa  128  6e-29  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  32.88 
 
 		 215 aa  126  2.0000000000000002e-28  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  32.43 
 
 		 215 aa  127  2.0000000000000002e-28  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  32.88 
 
 		 215 aa  126  3e-28  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  32.88 
 
 		 215 aa  126  3e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  32.88 
 
 		 215 aa  126  3e-28  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  32.43 
 
 		 215 aa  126  3e-28  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  32.88 
 
 		 215 aa  126  3e-28  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_013132  Cpin_2907  two component transcriptional regulator, LuxR family  28.64 
 
 		 222 aa  126  3e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0590247  normal  1 
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  32.88 
 
 		 215 aa  126  3e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  30.88 
 
 		 216 aa  126  3e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  32.88 
 
 		 215 aa  125  4.0000000000000003e-28  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  32.13 
 
 		 215 aa  125  5e-28  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  31.96 
 
 		 219 aa  125  7e-28  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  32.41 
 
 		 220 aa  124  8.000000000000001e-28  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_6032  response regulator receiver protein  31.65 
 
 		 218 aa  124  1e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.53611  normal  1 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  33.33 
 
 		 218 aa  124  1e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  31.46 
 
 		 231 aa  123  2e-27  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_2963  two component transcriptional regulator, LuxR family  29.17 
 
 		 219 aa  124  2e-27  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  32.85 
 
 		 206 aa  124  2e-27  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  29.3 
 
 		 213 aa  123  3e-27  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  32.39 
 
 		 214 aa  122  5e-27  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  32.88 
 
 		 216 aa  121  8e-27  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  29.49 
 
 		 221 aa  121  9e-27  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  31.8 
 
 		 218 aa  120  9.999999999999999e-27  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  29.91 
 
 		 229 aa  120  1.9999999999999998e-26  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_4551  two component transcriptional regulator, LuxR family  30.77 
 
 		 208 aa  120  1.9999999999999998e-26  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.000124934  normal  0.0275678 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  29.09 
 
 		 228 aa  120  1.9999999999999998e-26  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  31.16 
 
 		 215 aa  120  1.9999999999999998e-26  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  35.78 
 
 		 208 aa  120  1.9999999999999998e-26  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  31.16 
 
 		 215 aa  120  1.9999999999999998e-26  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  31.16 
 
 		 215 aa  120  1.9999999999999998e-26  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  30.94 
 
 		 223 aa  119  3.9999999999999996e-26  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  31.05 
 
 		 221 aa  119  4.9999999999999996e-26  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  32.26 
 
 		 216 aa  119  4.9999999999999996e-26  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  27.78 
 
 		 226 aa  118  6e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  29.86 
 
 		 217 aa  118  7e-26  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_1317  response regulator  33.33 
 
 		 220 aa  118  7e-26  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  29.52 
 
 		 233 aa  117  9.999999999999999e-26  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  33.49 
 
 		 224 aa  117  9.999999999999999e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  28.64 
 
 		 212 aa  117  9.999999999999999e-26  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  26.96 
 
 		 234 aa  116  1.9999999999999998e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_008346  Swol_0186  response regulator receiver protein  31.46 
 
 		 213 aa  117  1.9999999999999998e-25  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000327076  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  28.31 
 
 		 222 aa  116  3e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  33.02 
 
 		 213 aa  116  3e-25  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  28.89 
 
 		 224 aa  116  3e-25  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  27.6 
 
 		 222 aa  116  3e-25  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_013132  Cpin_1732  two component transcriptional regulator, LuxR family  33.49 
 
 		 211 aa  115  3.9999999999999997e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  28.64 
 
 		 238 aa  115  5e-25  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.500036 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  30.14 
 
 		 221 aa  115  5e-25  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_009439  Pmen_1563  two component LuxR family transcriptional regulator  30.95 
 
 		 214 aa  115  5e-25  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.241819 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  31.34 
 
 		 216 aa  115  5e-25  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  31.31 
 
 		 213 aa  115  6e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.624898 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  28.37 
 
 		 213 aa  115  6.9999999999999995e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  28.83 
 
 		 225 aa  115  7.999999999999999e-25  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_013739  Cwoe_1233  two component transcriptional regulator, LuxR family  30.56 
 
 		 220 aa  114  8.999999999999998e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.681342  normal  0.792953 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  28.5 
 
 		 232 aa  114  1.0000000000000001e-24  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  28.84 
 
 		 223 aa  114  1.0000000000000001e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  27.8 
 
 		 226 aa  114  1.0000000000000001e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  29.91 
 
 		 232 aa  114  1.0000000000000001e-24  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4080  two component transcriptional regulator, LuxR family  30 
 
 		 241 aa  114  1.0000000000000001e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.858367 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  29.91 
 
 		 232 aa  114  1.0000000000000001e-24  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_011146  Gbem_2253  two component transcriptional regulator, LuxR family  32.23 
 
 		 216 aa  114  1.0000000000000001e-24  Geobacter bemidjiensis Bem  Bacteria  normal  0.174263  n/a   
 
 
-
 
NC_013235  Namu_2635  two component transcriptional regulator, LuxR family  30.99 
 
 		 217 aa  113  2.0000000000000002e-24  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000528497  hitchhiker  0.00476816 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  30.99 
 
 		 218 aa  114  2.0000000000000002e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  29.63 
 
 		 219 aa  114  2.0000000000000002e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  33.49 
 
 		 207 aa  112  3e-24  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  33.49 
 
 		 207 aa  112  3e-24  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  30.88 
 
 		 223 aa  113  3e-24  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal  1 
 
 
-
 
NC_007963  Csal_2132  two component LuxR family transcriptional regulator  30.84 
 
 		 214 aa  113  3e-24  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0449794  n/a   
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  31.46 
 
 		 210 aa  112  4.0000000000000004e-24  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_3390  LuxR family two component transcriptional regulator  32.03 
 
 		 228 aa  112  4.0000000000000004e-24  Thermobispora bispora DSM 43833  Bacteria  normal  0.269937  normal  1 
 
 
-
 
NC_011666  Msil_2019  two component transcriptional regulator, LuxR family  30.77 
 
 		 223 aa  112  4.0000000000000004e-24  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_013061  Phep_2735  response regulator receiver  28.38 
 
 		 224 aa  111  7.000000000000001e-24  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0572845  normal  1 
 
 
-
 
NC_003909  BCE_1102  LuxR family DNA-binding response regulator  32.26 
 
 		 214 aa  111  7.000000000000001e-24  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  28.76 
 
 		 225 aa  111  8.000000000000001e-24  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_013757  Gobs_2941  two component transcriptional regulator, LuxR family  28.97 
 
 		 219 aa  111  8.000000000000001e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.911135  n/a   
 
 
-
 
NC_007519  Dde_2674  two component LuxR family transcriptional regulator  29.44 
 
 		 215 aa  111  8.000000000000001e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.721789  n/a   
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  30.88 
 
 		 215 aa  111  8.000000000000001e-24  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_013235  Namu_5079  two component transcriptional regulator, LuxR family  28.96 
 
 		 217 aa  111  9e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.525358 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  29.86 
 
 		 224 aa  111  9e-24  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_4039  two component LuxR family transcriptional regulator  28.19 
 
 		 250 aa  111  1.0000000000000001e-23  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.512873  n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  29.44 
 
 		 221 aa  111  1.0000000000000001e-23  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  28.9 
 
 		 217 aa  111  1.0000000000000001e-23  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_009441  Fjoh_1987  two component LuxR family transcriptional regulator  29.67 
 
 		 213 aa  110  1.0000000000000001e-23  Flavobacterium johnsoniae UW101  Bacteria  normal  0.429674  n/a   
 
 
-
 
NC_012880  Dd703_1766  transcriptional regulator NarL  30.19 
 
 		 216 aa  111  1.0000000000000001e-23  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  28.64 
 
 		 213 aa  110  2.0000000000000002e-23  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
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