More than 300 homologs were found in PanDaTox collection
for query gene Acry_1631 on replicon NC_009484
Organism: Acidiphilium cryptum JF-5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009484  Acry_1631  CRP/FNR family transcriptional regulator  100 
 
 
310 aa  630  1e-179  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_1984  transcriptional regulator, Crp/Fnr family  50.67 
 
 
250 aa  218  7.999999999999999e-56  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.312779  normal 
 
 
-
 
NC_010511  M446_0946  Crp/FNR family transcriptional regulator  44.93 
 
 
253 aa  173  3.9999999999999995e-42  Methylobacterium sp. 4-46  Bacteria  normal  0.336903  normal 
 
 
-
 
NC_011894  Mnod_5030  transcriptional regulator, Crp/Fnr family  41.15 
 
 
238 aa  169  4e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3926  transcriptional regulator, Crp/Fnr family  41.15 
 
 
238 aa  169  4e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2634  CRP/FNR family transcriptional regulator  39.73 
 
 
249 aa  167  2e-40  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3322  Crp/FNR family transcriptional regulator  41.44 
 
 
262 aa  166  5.9999999999999996e-40  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0702622  n/a   
 
 
-
 
NC_009505  BOV_0647  nitrogen fixation regulation protein fixk  38.37 
 
 
251 aa  164  1.0000000000000001e-39  Brucella ovis ATCC 25840  Bacteria  normal  0.774151  n/a   
 
 
-
 
NC_010172  Mext_1357  cyclic nucleotide-binding  41.26 
 
 
250 aa  164  2.0000000000000002e-39  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.395788 
 
 
-
 
NC_010725  Mpop_1302  transcriptional regulator, Crp/Fnr family  41.35 
 
 
254 aa  163  3e-39  Methylobacterium populi BJ001  Bacteria  normal  0.0109091  normal 
 
 
-
 
NC_011894  Mnod_0422  transcriptional regulator, Crp/Fnr family  42.08 
 
 
246 aa  162  6e-39  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_1557  transcriptional regulator, Crp/Fnr family  40.29 
 
 
250 aa  161  1e-38  Methylobacterium chloromethanicum CM4  Bacteria  decreased coverage  0.00717235  normal 
 
 
-
 
NC_009485  BBta_5746  Crp/FNR family transcriptional regulator  40.95 
 
 
237 aa  161  1e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.765257  normal 
 
 
-
 
NC_004310  BR0654  Crp/FNR family transcriptional regulator  39.01 
 
 
248 aa  161  2e-38  Brucella suis 1330  Bacteria  normal  0.48838  n/a   
 
 
-
 
NC_010511  M446_6132  Crp/FNR family transcriptional regulator  41.75 
 
 
245 aa  159  7e-38  Methylobacterium sp. 4-46  Bacteria  normal  0.0884478  normal 
 
 
-
 
NC_011004  Rpal_4713  transcriptional regulator, Crp/Fnr family  38.46 
 
 
239 aa  153  2.9999999999999998e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.557049  n/a   
 
 
-
 
NC_007406  Nwi_2061  Crp family transcriptional regulator  40.34 
 
 
241 aa  150  2e-35  Nitrobacter winogradskyi Nb-255  Bacteria  hitchhiker  0.00300081  normal 
 
 
-
 
NC_007964  Nham_1258  Crp/FNR family transcriptional regulator  39.47 
 
 
241 aa  151  2e-35  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_2118  transcriptional regulator, Crp/Fnr family  41.1 
 
 
240 aa  150  3e-35  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  hitchhiker  0.00291012 
 
 
-
 
NC_007778  RPB_1377  Crp/FNR family transcriptional regulator  37.56 
 
 
239 aa  150  3e-35  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1357  Crp/Fnr family transcriptional regulator  38.01 
 
 
239 aa  150  4e-35  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4039  Crp/FNR family transcriptional regulator  38.22 
 
 
239 aa  148  1.0000000000000001e-34  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.70749  normal 
 
 
-
 
NC_012850  Rleg_2360  transcriptional regulator, Crp/Fnr family  40.19 
 
 
240 aa  143  4e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.948966  hitchhiker  0.00636029 
 
 
-
 
NC_011071  Smal_1752  transcriptional regulator, Crp/Fnr family  39.52 
 
 
250 aa  142  8e-33  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.103124 
 
 
-
 
NC_011989  Avi_2026  transcriptional activator Crp family  36.13 
 
 
241 aa  141  9.999999999999999e-33  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1742  CRP/FNR family transcriptional regulator  40.36 
 
 
242 aa  137  3.0000000000000003e-31  Sinorhizobium medicae WSM419  Bacteria  normal  0.275504  normal  0.265558 
 
 
-
 
NC_009511  Swit_1945  Crp/FNR family transcriptional regulator  36.6 
 
 
242 aa  132  1.0000000000000001e-29  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1678  Crp/FNR family transcriptional regulator  36.73 
 
 
230 aa  130  2.0000000000000002e-29  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.330352  normal 
 
 
-
 
NC_010505  Mrad2831_2581  Crp/FNR family transcriptional regulator  45.09 
 
 
222 aa  129  5.0000000000000004e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3858  Crp/FNR family transcriptional regulator  35.44 
 
 
248 aa  129  6e-29  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2699  Crp/FNR family transcriptional regulator  31.53 
 
 
232 aa  129  6e-29  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.276502  n/a   
 
 
-
 
NC_009428  Rsph17025_0532  CRP/FNR family transcriptional regulator  34.72 
 
 
248 aa  126  6e-28  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.283437 
 
 
-
 
NC_007493  RSP_0698  Crp-Fnr regulatory protein (FnrL)  33.64 
 
 
248 aa  125  1e-27  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2353  CRP/FNR family transcriptional regulator  33.64 
 
 
248 aa  125  1e-27  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.689366  normal  0.139893 
 
 
-
 
NC_008044  TM1040_2547  Crp/FNR family transcriptional regulator  34.51 
 
 
246 aa  125  1e-27  Ruegeria sp. TM1040  Bacteria  normal  0.389339  normal  0.365128 
 
 
-
 
NC_009952  Dshi_0660  transcriptional regulator  34.67 
 
 
249 aa  123  4e-27  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_2581  Crp/FNR family transcriptional regulator  34.63 
 
 
231 aa  122  6e-27  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.658135  n/a   
 
 
-
 
NC_011757  Mchl_3812  transcriptional regulator, Crp/Fnr family  38.28 
 
 
229 aa  120  1.9999999999999998e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3505  regulatory protein Crp  38.28 
 
 
229 aa  120  1.9999999999999998e-26  Methylobacterium extorquens PA1  Bacteria  normal  0.021842  normal 
 
 
-
 
NC_010505  Mrad2831_3277  Crp/FNR family transcriptional regulator  39.57 
 
 
226 aa  120  1.9999999999999998e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_2039  CRP/FNR family transcriptional regulator  38.02 
 
 
242 aa  120  3e-26  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191538  hitchhiker  0.00387918 
 
 
-
 
NC_011894  Mnod_5386  transcriptional regulator, Crp/Fnr family  36.16 
 
 
230 aa  115  6.9999999999999995e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.662421  n/a   
 
 
-
 
NC_003910  CPS_1987  fumarate/nitrate reduction transcriptional regulator  32.85 
 
 
239 aa  115  7.999999999999999e-25  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_2081  fumarate/nitrate reduction transcriptional regulator  32.44 
 
 
250 aa  115  1.0000000000000001e-24  Dickeya zeae Ech1591  Bacteria  normal  0.0488524  n/a   
 
 
-
 
NC_009484  Acry_0576  CRP/FNR family transcriptional regulator  36.32 
 
 
235 aa  114  2.0000000000000002e-24  Acidiphilium cryptum JF-5  Bacteria  normal  0.670039  n/a   
 
 
-
 
NC_007406  Nwi_1036  transcriptional regulator FixK  35.05 
 
 
231 aa  114  2.0000000000000002e-24  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1340  transcriptional regulator FixK  35.23 
 
 
229 aa  114  2.0000000000000002e-24  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.324269  normal 
 
 
-
 
NC_009654  Mmwyl1_2233  CRP/FNR family transcriptional regulator  32.37 
 
 
253 aa  114  2.0000000000000002e-24  Marinomonas sp. MWYL1  Bacteria  normal  0.0375344  normal  0.791743 
 
 
-
 
CP001637  EcDH1_2311  transcriptional regulator, Crp/Fnr family  32.44 
 
 
250 aa  114  3e-24  Escherichia coli DH1  Bacteria  normal  0.144598  n/a   
 
 
-
 
NC_010468  EcolC_2291  fumarate/nitrate reduction transcriptional regulator  32.44 
 
 
250 aa  114  3e-24  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_1546  fumarate/nitrate reduction transcriptional regulator  32.44 
 
 
250 aa  114  3e-24  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1450  fumarate/nitrate reduction transcriptional regulator  32.44 
 
 
250 aa  114  3e-24  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1788  fumarate/nitrate reduction transcriptional regulator  32.44 
 
 
250 aa  114  3e-24  Escherichia coli SMS-3-5  Bacteria  normal  0.765276  normal 
 
 
-
 
NC_010658  SbBS512_E1575  fumarate/nitrate reduction transcriptional regulator  32.44 
 
 
250 aa  114  3e-24  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1951  transcriptional regulator FixK  35.03 
 
 
231 aa  114  3e-24  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2398  fumarate/nitrate reduction transcriptional regulator  32.44 
 
 
248 aa  113  4.0000000000000004e-24  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2293  fumarate/nitrate reduction transcriptional regulator  31.56 
 
 
250 aa  113  4.0000000000000004e-24  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1944  fumarate/nitrate reduction transcriptional regulator  31.56 
 
 
250 aa  113  4.0000000000000004e-24  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.755264  n/a   
 
 
-
 
NC_011004  Rpal_4729  transcriptional regulator FixK  31.91 
 
 
230 aa  113  4.0000000000000004e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1833  fumarate/nitrate reduction transcriptional regulator  31.56 
 
 
250 aa  113  4.0000000000000004e-24  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1864  fumarate/nitrate reduction transcriptional regulator  32.44 
 
 
250 aa  113  4.0000000000000004e-24  Dickeya dadantii Ech703  Bacteria  normal  0.856056  n/a   
 
 
-
 
NC_011080  SNSL254_A1783  fumarate/nitrate reduction transcriptional regulator  32.44 
 
 
250 aa  113  5e-24  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.251439 
 
 
-
 
NC_009621  Smed_6270  transcriptional regulator FixK  37.04 
 
 
211 aa  113  5e-24  Sinorhizobium medicae WSM419  Bacteria  normal  0.967473  normal  0.128199 
 
 
-
 
NC_011205  SeD_A1673  fumarate/nitrate reduction transcriptional regulator  32.44 
 
 
250 aa  113  5e-24  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.349784  normal  0.0983377 
 
 
-
 
NC_011149  SeAg_B1491  fumarate/nitrate reduction transcriptional regulator  32.44 
 
 
250 aa  113  5e-24  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0202312  n/a   
 
 
-
 
NC_011083  SeHA_C1845  fumarate/nitrate reduction transcriptional regulator  32.44 
 
 
250 aa  113  5e-24  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.918423  normal 
 
 
-
 
NC_012917  PC1_2105  fumarate/nitrate reduction transcriptional regulator  32.44 
 
 
248 aa  113  5e-24  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0944449  n/a   
 
 
-
 
NC_011094  SeSA_A1785  fumarate/nitrate reduction transcriptional regulator  32.44 
 
 
250 aa  113  5e-24  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.377507  normal  0.141635 
 
 
-
 
NC_009485  BBta_2786  transcriptional regulator FixK  36.27 
 
 
229 aa  112  6e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0460697  normal  0.11454 
 
 
-
 
NC_011353  ECH74115_1981  fumarate/nitrate reduction transcriptional regulator  32 
 
 
250 aa  112  6e-24  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.320226 
 
 
-
 
NC_007964  Nham_0870  transcriptional regulator FixK  40.23 
 
 
227 aa  112  7.000000000000001e-24  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6927  Crp/FNR family transcriptional regulator  38.14 
 
 
227 aa  112  8.000000000000001e-24  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.422372 
 
 
-
 
NC_009436  Ent638_1853  fumarate/nitrate reduction transcriptional regulator  32.44 
 
 
250 aa  112  1.0000000000000001e-23  Enterobacter sp. 638  Bacteria  normal  normal  0.755428 
 
 
-
 
NC_011894  Mnod_6164  transcriptional regulator, Crp/Fnr family  38.5 
 
 
247 aa  111  1.0000000000000001e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.257657  n/a   
 
 
-
 
NC_007954  Sden_1843  fumarate/nitrate reduction transcriptional regulator  32.89 
 
 
250 aa  111  1.0000000000000001e-23  Shewanella denitrificans OS217  Bacteria  normal  0.0177159  n/a   
 
 
-
 
NC_008686  Pden_1850  CRP/FNR family transcriptional regulator  37.36 
 
 
211 aa  112  1.0000000000000001e-23  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2018  fumarate/nitrate reduction transcriptional regulator  32 
 
 
252 aa  112  1.0000000000000001e-23  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.831368  n/a   
 
 
-
 
NC_007778  RPB_1361  transcriptional regulator FixK  34.72 
 
 
229 aa  111  2.0000000000000002e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0646149  normal 
 
 
-
 
NC_010515  Bcenmc03_4486  Crp/FNR family transcriptional regulator  32.7 
 
 
248 aa  110  3e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3889  transcriptional regulator, Crp/Fnr family  40.48 
 
 
229 aa  110  3e-23  Methylobacterium populi BJ001  Bacteria  normal  normal  0.128439 
 
 
-
 
NC_007511  Bcep18194_B3138  Crp/FNR family transcriptional regulator  32.7 
 
 
248 aa  110  4.0000000000000004e-23  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_1464  transcriptional activator Anr  32.86 
 
 
244 aa  110  4.0000000000000004e-23  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_2457  Crp/FNR family transcriptional regulator  36.08 
 
 
204 aa  109  5e-23  Caulobacter sp. K31  Bacteria  normal  0.325923  normal  0.600278 
 
 
-
 
NC_010552  BamMC406_3149  Crp/FNR family transcriptional regulator  32.85 
 
 
249 aa  109  5e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_5008  Crp/FNR family transcriptional regulator  32.85 
 
 
249 aa  109  5e-23  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2772  Crp/FNR family transcriptional regulator  31.88 
 
 
245 aa  109  7.000000000000001e-23  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00275745 
 
 
-
 
NC_007925  RPC_4055  transcriptional regulator FixK  35.75 
 
 
229 aa  109  7.000000000000001e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1045  fumarate/nitrate reduction transcriptional regulator  31.56 
 
 
250 aa  108  8.000000000000001e-23  Vibrio cholerae O395  Bacteria  normal  0.18077  n/a   
 
 
-
 
NC_004347  SO_2356  fumarate/nitrate reduction transcriptional regulator  34.74 
 
 
254 aa  108  9.000000000000001e-23  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2209  fumarate/nitrate reduction transcriptional regulator  34 
 
 
250 aa  108  1e-22  Shewanella baltica OS155  Bacteria  hitchhiker  0.00613295  n/a   
 
 
-
 
NC_008782  Ajs_1091  CRP/FNR family transcriptional regulator  31.69 
 
 
247 aa  108  1e-22  Acidovorax sp. JS42  Bacteria  normal  0.140321  normal 
 
 
-
 
NC_008577  Shewana3_2115  fumarate/nitrate reduction transcriptional regulator  35.16 
 
 
250 aa  108  1e-22  Shewanella sp. ANA-3  Bacteria  normal  0.508722  normal  0.0650668 
 
 
-
 
NC_009997  Sbal195_2212  fumarate/nitrate reduction transcriptional regulator  34 
 
 
250 aa  108  1e-22  Shewanella baltica OS195  Bacteria  hitchhiker  0.00299596  normal  0.266977 
 
 
-
 
NC_009665  Shew185_2162  fumarate/nitrate reduction transcriptional regulator  34 
 
 
250 aa  108  1e-22  Shewanella baltica OS185  Bacteria  normal  0.914647  n/a   
 
 
-
 
NC_009035  Sbal_4495  fumarate/nitrate reduction transcriptional regulator  34 
 
 
250 aa  108  1e-22  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_007948  Bpro_1170  Crp/FNR family transcriptional regulator  31.75 
 
 
274 aa  108  1e-22  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2222  fumarate/nitrate reduction transcriptional regulator  33 
 
 
250 aa  108  1e-22  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0665535  n/a   
 
 
-
 
NC_008321  Shewmr4_2014  fumarate/nitrate reduction transcriptional regulator  35.16 
 
 
250 aa  108  1e-22  Shewanella sp. MR-4  Bacteria  normal  decreased coverage  0.00000000422436 
 
 
-
 
NC_008322  Shewmr7_1961  fumarate/nitrate reduction transcriptional regulator  35.16 
 
 
250 aa  108  1e-22  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00754009 
 
 
-
 
NC_011312  VSAL_I1571  fumarate/nitrate reduction transcriptional regulator  32 
 
 
250 aa  108  1e-22  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.75505  n/a   
 
 
-
 
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