Gene Pden_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1850 
Symbol 
ID4581034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1849236 
End bp1849871 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content68% 
IMG OID639769170 
ProductCRP/FNR family transcriptional regulator 
Protein accessionYP_915643 
Protein GI119384587 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCT ATCGCCGCTA CGAGGCGGGA CAGGTCGTGG TCTGGGCCGG CGACCGGATG 
GATTTCGTGG CCTCGGTGGT CGCCGGCATG GCCGGGCTGA CCCAGCAGCT CGAGGATGGG
CGCACGCAGA TGGTGGGTCT GCTGCTGCCC AGCGATTTCC TGGGCCGGCC GGGGCGCGAC
ATGGCGGCCT ATACCGTGAC CGCGACCAGC GACCTTGTGC TGTGCTGCTT TCGGCGCAAG
CCTTTCGAAA AGCTGCTGAT CGACAATCCC CGCATCGCCA GCCGGCTGCT GGAGATGACG
CTGGACGAGC TTGACGCCGC CCGCGACTGG CTGCTGCTGC TGGGCCGGAA ATCGGCGCGC
GAGAAGATCG CCTCGCTGCT GGTGATCCTG GCACGGCGCG AGGCTGCGCT GATCAAGCGC
CGCCCCGAGG GGCGCATCAC CATCGAACTG CCGCTGACGC GCGAGGCGAT GGCGGATTAC
CTGGGCCTGA CGCTGGAGAC CGTCAGCCGG CAGATGAGCG CGCTCAAGCG CGAAGGGGTG
ATCGAACTCG ACGGCAAGCG GCGGGTGATC GTGCCCTCTT TCGTGCGGCT GGTCACCGAA
AGCGGCGACG ACTCGGACGG CGGGCCGCTC AGCTAG
 
Protein sequence
MKFYRRYEAG QVVVWAGDRM DFVASVVAGM AGLTQQLEDG RTQMVGLLLP SDFLGRPGRD 
MAAYTVTATS DLVLCCFRRK PFEKLLIDNP RIASRLLEMT LDELDAARDW LLLLGRKSAR
EKIASLLVIL ARREAALIKR RPEGRITIEL PLTREAMADY LGLTLETVSR QMSALKREGV
IELDGKRRVI VPSFVRLVTE SGDDSDGGPL S