Gene Bpro_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_1170 
Symbol 
ID4012004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp1212534 
End bp1213358 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content63% 
IMG OID637940847 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_548019 
Protein GI91787067 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACCG CCACACTCAT ACGCACACAG GAGCGCACAC AAGAGCGTAC GCAGGAAACA 
CCCGCCAGCG ACCTGCGGGT CATTCCGATT CGACAGGCCA TGGGGGATGC GCAGGTCGCG
CCTTTGGGGA CACCCTGCTC CAGCTGCCAC CTGTGCGATC TGTGCCTGCC CTGCGGCATG
ACAGACGGCG ACGTGGAGTG CCTGGACAGC CTGACGTTCG GGCGTCGCAA GGTCAAGGCC
GGCCAGACGC TCTTTGACGA GGGCGACCAC TTTCAATTCA TGTATGCCGT GCGCAGCGGC
ACCTTCAAGT CCAGCCTGAT GCTGGCCGAC GGCCGCGAGC AGATCAGTGG CTTCCACATG
GCCGGTGAGC TGATTGGCCT GGACGGCGTG GCCTATGGCA AGCATGCCAG CACCGCTACG
GCGCTGGAGG ATACCGAGGT CTGCGTCATT CCCTATGCGC AACTGACCCG GCTGGCCACC
GGCAACGCCA GCATGCAGAA CATGGTCAGT CGCCTGATGA GCCGCGAGAT CATCCGGGAA
CACAGCCTGA TGCTGTTGCT GGGCAGCATG AACGCCGAGG AACGGCTGGC GGCGTTTCTG
CTGAACCTGT CGCAGCGCCT GAAGGCCCGC GGCTACTCGG CCAGCGAATT TCACCTGAGG
ATGACGCGCG CCGAAATCGG TAGCTACCTG GGCATGAAAC TGGAAACCGT CAGCCGCACA
TTCTCGGCCT TCCAGCAGCA GGGTTTGCTT GAAGTCGACA AGCGCCACAT CCGCATCGTC
AACCTGGACG GCCTGACGCG GGTCTTCGAG ATGCACCTGC ACTGA
 
Protein sequence
MSTATLIRTQ ERTQERTQET PASDLRVIPI RQAMGDAQVA PLGTPCSSCH LCDLCLPCGM 
TDGDVECLDS LTFGRRKVKA GQTLFDEGDH FQFMYAVRSG TFKSSLMLAD GREQISGFHM
AGELIGLDGV AYGKHASTAT ALEDTEVCVI PYAQLTRLAT GNASMQNMVS RLMSREIIRE
HSLMLLLGSM NAEERLAAFL LNLSQRLKAR GYSASEFHLR MTRAEIGSYL GMKLETVSRT
FSAFQQQGLL EVDKRHIRIV NLDGLTRVFE MHLH