Gene YpsIP31758_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1833 
Symbolfnr 
ID5385211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp2121232 
End bp2121984 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content45% 
IMG OID640864817 
Productfumarate/nitrate reduction transcriptional regulator 
Protein accessionYP_001400808 
Protein GI153949511 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCCTG AAAAACGCGT TATCCGACGA ATTCAGTCTG GTGGGTGTGC AATTCACTGT 
CAGGATTGCA GCATCAGTCA GCTCTGTATT CCGTTTACCT TAAATGAGCA TGAGCTTGAT
CAGCTCGACA ATATCATTGA AAGGAAAAAA CCTATTCAAA AAGGACAGGC GCTGTTTAAA
GCAGGTGATG AACTTAAATC ACTGTATGCT ATCCGTTCTG GGACCATTAA AAGCTACACC
ATTACCGAAG AAGGCGATGA ACAAATTACC GGTTTCCATC TGGCGGGTGA TTTAGTCGGT
TTCGATGCGA TCAGTAATCT GCAACACCCA AGTTTTGCCC AAGCGTTAGA AACATCAATG
GTGTGTGAAA TCCCATTTGA TACCTTGGAT GATCTTTCCG GTAAAATGCC CAATCTGCGC
CAACAGATAA TGCGTTTGAT GAGCGGTGAA ATCAAAGGCG ATCAAGACAT GATCTTGCTG
CTCTCTAAAA AGAATGCGGA AGAGCGCCTG GCCGCCTTTA TCTACAATCT ATCCCATCGT
TTTGCTCAGC GCGGTTTCTC ACCACGTGAA TTTCGCTTGA CCATGACCCG TGGTGATATT
GGTAACTATT TAGGCCTGAC AGTGGAAACG ATTAGCCGCT TACTGGGGCG TTTCCAGAAA
AGCAATATTC TCAGCGTGAA AGGAAAATAC ATCACGATTG AGAATAACGA AGCACTGGCT
CAGTTGGCAG GTAACCCAAA ACCTCGGCTA TAG
 
Protein sequence
MIPEKRVIRR IQSGGCAIHC QDCSISQLCI PFTLNEHELD QLDNIIERKK PIQKGQALFK 
AGDELKSLYA IRSGTIKSYT ITEEGDEQIT GFHLAGDLVG FDAISNLQHP SFAQALETSM
VCEIPFDTLD DLSGKMPNLR QQIMRLMSGE IKGDQDMILL LSKKNAEERL AAFIYNLSHR
FAQRGFSPRE FRLTMTRGDI GNYLGLTVET ISRLLGRFQK SNILSVKGKY ITIENNEALA
QLAGNPKPRL