More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_0532 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009428  Rsph17025_0532  CRP/FNR family transcriptional regulator  100 
 
 
248 aa  505  9.999999999999999e-143  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.283437 
 
 
-
 
NC_009049  Rsph17029_2353  CRP/FNR family transcriptional regulator  95.97 
 
 
248 aa  491  9.999999999999999e-139  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.689366  normal  0.139893 
 
 
-
 
NC_007493  RSP_0698  Crp-Fnr regulatory protein (FnrL)  95.97 
 
 
248 aa  491  9.999999999999999e-139  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_2547  Crp/FNR family transcriptional regulator  77.78 
 
 
246 aa  389  1e-107  Ruegeria sp. TM1040  Bacteria  normal  0.389339  normal  0.365128 
 
 
-
 
NC_009952  Dshi_0660  transcriptional regulator  72.1 
 
 
249 aa  366  1e-100  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3858  Crp/FNR family transcriptional regulator  69.23 
 
 
248 aa  348  5e-95  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_1850  CRP/FNR family transcriptional regulator  71.63 
 
 
211 aa  310  1e-83  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_2581  Crp/FNR family transcriptional regulator  44.3 
 
 
231 aa  192  5e-48  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.658135  n/a   
 
 
-
 
NC_008048  Sala_1678  Crp/FNR family transcriptional regulator  41.85 
 
 
230 aa  192  5e-48  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.330352  normal 
 
 
-
 
NC_011989  Avi_2026  transcriptional activator Crp family  42.42 
 
 
241 aa  188  8e-47  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1945  Crp/FNR family transcriptional regulator  43.78 
 
 
242 aa  180  2e-44  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2118  transcriptional regulator, Crp/Fnr family  41.44 
 
 
240 aa  175  6e-43  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  hitchhiker  0.00291012 
 
 
-
 
NC_012850  Rleg_2360  transcriptional regulator, Crp/Fnr family  41.78 
 
 
240 aa  172  3.9999999999999995e-42  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.948966  hitchhiker  0.00636029 
 
 
-
 
NC_009636  Smed_1742  CRP/FNR family transcriptional regulator  39.83 
 
 
242 aa  166  2.9999999999999998e-40  Sinorhizobium medicae WSM419  Bacteria  normal  0.275504  normal  0.265558 
 
 
-
 
NC_007406  Nwi_2061  Crp family transcriptional regulator  38.3 
 
 
241 aa  163  2.0000000000000002e-39  Nitrobacter winogradskyi Nb-255  Bacteria  hitchhiker  0.00300081  normal 
 
 
-
 
NC_007964  Nham_1258  Crp/FNR family transcriptional regulator  37.13 
 
 
241 aa  158  1e-37  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5746  Crp/FNR family transcriptional regulator  36.84 
 
 
237 aa  145  7.0000000000000006e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.765257  normal 
 
 
-
 
NC_011894  Mnod_5030  transcriptional regulator, Crp/Fnr family  39.13 
 
 
238 aa  140  1.9999999999999998e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3926  transcriptional regulator, Crp/Fnr family  39.13 
 
 
238 aa  140  1.9999999999999998e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0946  Crp/FNR family transcriptional regulator  38.67 
 
 
253 aa  138  7e-32  Methylobacterium sp. 4-46  Bacteria  normal  0.336903  normal 
 
 
-
 
NC_007778  RPB_1377  Crp/FNR family transcriptional regulator  35.84 
 
 
239 aa  134  9.999999999999999e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1357  Crp/Fnr family transcriptional regulator  35.84 
 
 
239 aa  134  9.999999999999999e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2279  Crp/FNR family transcriptional regulator  33.63 
 
 
258 aa  133  3e-30  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1230  CRP/FNR family transcriptional regulator  36.98 
 
 
263 aa  132  3.9999999999999996e-30  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2572  crpK, Fnr-type transcriptional regulator  36.98 
 
 
263 aa  132  3.9999999999999996e-30  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_0422  transcriptional regulator, Crp/Fnr family  35.96 
 
 
246 aa  131  9e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2634  CRP/FNR family transcriptional regulator  35.1 
 
 
249 aa  130  1.0000000000000001e-29  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1357  cyclic nucleotide-binding  38.6 
 
 
250 aa  130  2.0000000000000002e-29  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.395788 
 
 
-
 
NC_011757  Mchl_1557  transcriptional regulator, Crp/Fnr family  38.6 
 
 
250 aa  130  2.0000000000000002e-29  Methylobacterium chloromethanicum CM4  Bacteria  decreased coverage  0.00717235  normal 
 
 
-
 
NC_010725  Mpop_1302  transcriptional regulator, Crp/Fnr family  39.71 
 
 
254 aa  130  2.0000000000000002e-29  Methylobacterium populi BJ001  Bacteria  normal  0.0109091  normal 
 
 
-
 
NC_009428  Rsph17025_1951  CRP/FNR family transcriptional regulator  33.5 
 
 
263 aa  129  5.0000000000000004e-29  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4039  Crp/FNR family transcriptional regulator  34.05 
 
 
239 aa  128  1.0000000000000001e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.70749  normal 
 
 
-
 
NC_004310  BR0654  Crp/FNR family transcriptional regulator  33.62 
 
 
248 aa  127  2.0000000000000002e-28  Brucella suis 1330  Bacteria  normal  0.48838  n/a   
 
 
-
 
NC_009484  Acry_1631  CRP/FNR family transcriptional regulator  34.72 
 
 
310 aa  126  4.0000000000000003e-28  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0647  nitrogen fixation regulation protein fixk  33.62 
 
 
251 aa  125  5e-28  Brucella ovis ATCC 25840  Bacteria  normal  0.774151  n/a   
 
 
-
 
NC_010511  M446_6132  Crp/FNR family transcriptional regulator  34.51 
 
 
245 aa  122  7e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.0884478  normal 
 
 
-
 
NC_011004  Rpal_4713  transcriptional regulator, Crp/Fnr family  33.03 
 
 
239 aa  122  8e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.557049  n/a   
 
 
-
 
NC_011365  Gdia_1984  transcriptional regulator, Crp/Fnr family  34.26 
 
 
250 aa  115  8.999999999999998e-25  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.312779  normal 
 
 
-
 
NC_011071  Smal_1752  transcriptional regulator, Crp/Fnr family  35.58 
 
 
250 aa  112  5e-24  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.103124 
 
 
-
 
NC_011894  Mnod_5386  transcriptional regulator, Crp/Fnr family  36.31 
 
 
230 aa  110  2.0000000000000002e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.662421  n/a   
 
 
-
 
NC_007912  Sde_1464  transcriptional activator Anr  31.78 
 
 
244 aa  110  2.0000000000000002e-23  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3322  Crp/FNR family transcriptional regulator  31.22 
 
 
262 aa  110  3e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0702622  n/a   
 
 
-
 
NC_010505  Mrad2831_2581  Crp/FNR family transcriptional regulator  32.62 
 
 
222 aa  107  2e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6164  transcriptional regulator, Crp/Fnr family  34.63 
 
 
247 aa  106  4e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.257657  n/a   
 
 
-
 
NC_009012  Cthe_2775  Crp/FNR family transcriptional regulator  23.81 
 
 
232 aa  106  4e-22  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.9012  n/a   
 
 
-
 
NC_009719  Plav_2039  CRP/FNR family transcriptional regulator  32.45 
 
 
242 aa  103  2e-21  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191538  hitchhiker  0.00387918 
 
 
-
 
NC_011757  Mchl_3812  transcriptional regulator, Crp/Fnr family  33.69 
 
 
229 aa  102  6e-21  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3277  Crp/FNR family transcriptional regulator  33.16 
 
 
226 aa  102  6e-21  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3505  regulatory protein Crp  33.69 
 
 
229 aa  102  7e-21  Methylobacterium extorquens PA1  Bacteria  normal  0.021842  normal 
 
 
-
 
NC_010338  Caul_0629  transcriptional regulator FixK  33.33 
 
 
215 aa  102  7e-21  Caulobacter sp. K31  Bacteria  normal  0.595222  normal  0.236212 
 
 
-
 
NC_007778  RPB_1361  transcriptional regulator FixK  34.24 
 
 
229 aa  101  1e-20  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0646149  normal 
 
 
-
 
NC_010505  Mrad2831_0408  Crp/FNR family transcriptional regulator  36.09 
 
 
230 aa  100  2e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_2975  Crp/FNR family transcriptional regulator  32.18 
 
 
220 aa  100  3e-20  Caulobacter sp. K31  Bacteria  normal  0.169439  normal  0.307783 
 
 
-
 
NC_007925  RPC_4055  transcriptional regulator FixK  33.51 
 
 
229 aa  99.4  5e-20  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4729  transcriptional regulator FixK  32.29 
 
 
230 aa  98.6  7e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1340  transcriptional regulator FixK  33.7 
 
 
229 aa  98.6  8e-20  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.324269  normal 
 
 
-
 
NC_007406  Nwi_1036  transcriptional regulator FixK  31.56 
 
 
231 aa  97.8  1e-19  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1853  fumarate/nitrate reduction transcriptional regulator  29.28 
 
 
250 aa  97.8  1e-19  Enterobacter sp. 638  Bacteria  normal  normal  0.755428 
 
 
-
 
NC_009485  BBta_2786  transcriptional regulator FixK  32.81 
 
 
229 aa  98.2  1e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0460697  normal  0.11454 
 
 
-
 
NC_011894  Mnod_4871  transcriptional regulator, Crp/Fnr family  31.96 
 
 
228 aa  97.8  1e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_3889  transcriptional regulator, Crp/Fnr family  35.67 
 
 
229 aa  98.2  1e-19  Methylobacterium populi BJ001  Bacteria  normal  normal  0.128439 
 
 
-
 
NC_010511  M446_6927  Crp/FNR family transcriptional regulator  35.14 
 
 
227 aa  97.4  2e-19  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.422372 
 
 
-
 
NC_007974  Rmet_4521  Crp/Fnr family transcriptional regulator  30.73 
 
 
257 aa  97.4  2e-19  Cupriavidus metallidurans CH34  Bacteria  normal  0.0161618  normal  0.0108643 
 
 
-
 
NC_008228  Patl_2699  Crp/FNR family transcriptional regulator  28.06 
 
 
232 aa  97.4  2e-19  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.276502  n/a   
 
 
-
 
NC_011353  ECH74115_1981  fumarate/nitrate reduction transcriptional regulator  28.7 
 
 
250 aa  96.7  3e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.320226 
 
 
-
 
NC_010511  M446_6107  Crp/FNR family transcriptional regulator  34.38 
 
 
227 aa  96.7  3e-19  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0266042 
 
 
-
 
NC_010531  Pnec_1356  transcriptional regulator, Crp/Fnr family  29.18 
 
 
256 aa  96.7  3e-19  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.0588975 
 
 
-
 
CP001637  EcDH1_2311  transcriptional regulator, Crp/Fnr family  28.89 
 
 
250 aa  96.3  4e-19  Escherichia coli DH1  Bacteria  normal  0.144598  n/a   
 
 
-
 
NC_009800  EcHS_A1450  fumarate/nitrate reduction transcriptional regulator  28.89 
 
 
250 aa  96.3  4e-19  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1788  fumarate/nitrate reduction transcriptional regulator  28.89 
 
 
250 aa  96.3  4e-19  Escherichia coli SMS-3-5  Bacteria  normal  0.765276  normal 
 
 
-
 
NC_007964  Nham_0870  transcriptional regulator FixK  33.8 
 
 
227 aa  96.3  4e-19  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1546  fumarate/nitrate reduction transcriptional regulator  28.89 
 
 
250 aa  96.3  4e-19  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E1575  fumarate/nitrate reduction transcriptional regulator  28.89 
 
 
250 aa  96.3  4e-19  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2291  fumarate/nitrate reduction transcriptional regulator  28.89 
 
 
250 aa  96.3  4e-19  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C1845  fumarate/nitrate reduction transcriptional regulator  28.83 
 
 
250 aa  95.5  6e-19  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.918423  normal 
 
 
-
 
NC_009429  Rsph17025_3610  hypothetical protein  31.31 
 
 
231 aa  95.9  6e-19  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B1491  fumarate/nitrate reduction transcriptional regulator  28.83 
 
 
250 aa  95.5  6e-19  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0202312  n/a   
 
 
-
 
NC_011205  SeD_A1673  fumarate/nitrate reduction transcriptional regulator  28.83 
 
 
250 aa  95.5  6e-19  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.349784  normal  0.0983377 
 
 
-
 
NC_011080  SNSL254_A1783  fumarate/nitrate reduction transcriptional regulator  28.83 
 
 
250 aa  95.5  6e-19  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.251439 
 
 
-
 
NC_011094  SeSA_A1785  fumarate/nitrate reduction transcriptional regulator  28.83 
 
 
250 aa  95.5  6e-19  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.377507  normal  0.141635 
 
 
-
 
NC_012917  PC1_2105  fumarate/nitrate reduction transcriptional regulator  28.45 
 
 
248 aa  95.1  8e-19  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0944449  n/a   
 
 
-
 
NC_013421  Pecwa_2398  fumarate/nitrate reduction transcriptional regulator  28.45 
 
 
248 aa  95.5  8e-19  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1864  fumarate/nitrate reduction transcriptional regulator  28.02 
 
 
250 aa  95.1  9e-19  Dickeya dadantii Ech703  Bacteria  normal  0.856056  n/a   
 
 
-
 
NC_009484  Acry_0576  CRP/FNR family transcriptional regulator  31.31 
 
 
235 aa  94.4  1e-18  Acidiphilium cryptum JF-5  Bacteria  normal  0.670039  n/a   
 
 
-
 
NC_012912  Dd1591_2081  fumarate/nitrate reduction transcriptional regulator  28.02 
 
 
250 aa  94  2e-18  Dickeya zeae Ech1591  Bacteria  normal  0.0488524  n/a   
 
 
-
 
NC_009656  PSPA7_3788  transcriptional regulator Anr  29.96 
 
 
244 aa  94  2e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  0.620164  n/a   
 
 
-
 
NC_009379  Pnuc_0460  CRP/FNR family transcriptional regulator  29.18 
 
 
256 aa  94  2e-18  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2233  CRP/FNR family transcriptional regulator  26.97 
 
 
253 aa  94  2e-18  Marinomonas sp. MWYL1  Bacteria  normal  0.0375344  normal  0.791743 
 
 
-
 
NC_007964  Nham_1951  transcriptional regulator FixK  32.82 
 
 
231 aa  94.4  2e-18  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1993  fumarate/nitrate reduction transcriptional regulator  26.64 
 
 
249 aa  94  2e-18  Shewanella loihica PV-4  Bacteria  normal  0.238952  normal 
 
 
-
 
NC_009901  Spea_2222  fumarate/nitrate reduction transcriptional regulator  25.75 
 
 
250 aa  94.4  2e-18  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0665535  n/a   
 
 
-
 
NC_008463  PA14_44490  transcriptional regulator Anr  29.96 
 
 
244 aa  94  2e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.793348 
 
 
-
 
NC_009457  VC0395_A1045  fumarate/nitrate reduction transcriptional regulator  27.71 
 
 
250 aa  93.6  3e-18  Vibrio cholerae O395  Bacteria  normal  0.18077  n/a   
 
 
-
 
NC_007643  Rru_A1787  cyclic nucleotide-binding domain-containing protein  29.09 
 
 
263 aa  93.2  3e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_6270  transcriptional regulator FixK  33.69 
 
 
211 aa  93.6  3e-18  Sinorhizobium medicae WSM419  Bacteria  normal  0.967473  normal  0.128199 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  23.56 
 
 
236 aa  93.6  3e-18  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_007347  Reut_A1147  cyclic nucleotide-binding: regulatory protein, Crp  26.87 
 
 
261 aa  93.2  4e-18  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1217  cyclic nucleotide-binding: regulatory protein, Crp  26.87 
 
 
261 aa  93.2  4e-18  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_3830  Crp/FNR family transcriptional regulator  29.86 
 
 
244 aa  92.4  5e-18  Pseudomonas putida GB-1  Bacteria  normal  normal  0.525453 
 
 
-
 
NC_010501  PputW619_3583  Crp/FNR family transcriptional regulator  29.86 
 
 
244 aa  92.4  6e-18  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
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