More than 300 homologs were found in PanDaTox collection
for query gene Rxyl_2629 on replicon NC_008148
Organism: Rubrobacter xylanophilus DSM 9941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  100 
 
 
232 aa  452  1.0000000000000001e-126  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  54.91 
 
 
229 aa  233  2.0000000000000002e-60  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  50.46 
 
 
226 aa  203  2e-51  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  49.77 
 
 
230 aa  198  7e-50  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_4183  two component LuxR family transcriptional regulator  43.98 
 
 
220 aa  193  2e-48  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  46.4 
 
 
229 aa  192  3e-48  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  47.75 
 
 
226 aa  192  6e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  49.32 
 
 
227 aa  191  8e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  45.41 
 
 
224 aa  189  2.9999999999999997e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  43.87 
 
 
222 aa  188  7e-47  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  48.4 
 
 
212 aa  186  2e-46  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  47.71 
 
 
220 aa  186  3e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  44.13 
 
 
210 aa  185  5e-46  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  45.62 
 
 
221 aa  185  6e-46  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.0179337 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  47.75 
 
 
226 aa  182  3e-45  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  42.11 
 
 
216 aa  182  3e-45  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2130  DNA-binding response regulator, LuxR family  43.52 
 
 
222 aa  182  4.0000000000000006e-45  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  43.96 
 
 
210 aa  182  4.0000000000000006e-45  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  47.75 
 
 
234 aa  182  4.0000000000000006e-45  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_007005  Psyr_1940  LuxR response regulator receiver  43.52 
 
 
222 aa  182  5.0000000000000004e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.95717  normal 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  46.33 
 
 
228 aa  181  6e-45  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  44.89 
 
 
223 aa  181  6e-45  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.03 
 
 
226 aa  181  7e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  44.34 
 
 
241 aa  181  8.000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  45.87 
 
 
218 aa  181  9.000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  38.46 
 
 
228 aa  180  1e-44  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  49.54 
 
 
227 aa  179  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  45.16 
 
 
218 aa  180  2e-44  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  45.12 
 
 
217 aa  179  2e-44  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  43.18 
 
 
218 aa  179  2e-44  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  43.48 
 
 
210 aa  179  2.9999999999999997e-44  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  43.48 
 
 
210 aa  179  2.9999999999999997e-44  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  43.48 
 
 
210 aa  179  2.9999999999999997e-44  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  43.48 
 
 
210 aa  179  2.9999999999999997e-44  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  41.86 
 
 
214 aa  179  2.9999999999999997e-44  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  43.48 
 
 
210 aa  179  2.9999999999999997e-44  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  44.65 
 
 
215 aa  179  2.9999999999999997e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  43.48 
 
 
210 aa  179  2.9999999999999997e-44  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  46.26 
 
 
230 aa  179  4e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  44.75 
 
 
221 aa  179  4.999999999999999e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  46.48 
 
 
214 aa  179  4.999999999999999e-44  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  43 
 
 
210 aa  178  5.999999999999999e-44  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  43.46 
 
 
216 aa  178  7e-44  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  44.7 
 
 
220 aa  178  8e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  47.66 
 
 
217 aa  178  8e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  47.98 
 
 
225 aa  178  8e-44  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  44.09 
 
 
222 aa  177  1e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  45.54 
 
 
217 aa  177  1e-43  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  44.29 
 
 
222 aa  177  1e-43  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  43 
 
 
210 aa  177  1e-43  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  46.95 
 
 
217 aa  176  2e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  47.06 
 
 
234 aa  177  2e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  42.51 
 
 
210 aa  176  3e-43  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_004116  SAG0322  DNA-binding response regulator  42.92 
 
 
213 aa  176  3e-43  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  43.98 
 
 
220 aa  176  3e-43  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  44.44 
 
 
239 aa  176  3e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  41.78 
 
 
210 aa  176  3e-43  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  46.51 
 
 
225 aa  176  3e-43  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.84 
 
 
239 aa  176  4e-43  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  44.86 
 
 
224 aa  175  6e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  44.75 
 
 
230 aa  175  6e-43  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  45.83 
 
 
234 aa  174  9e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  39.05 
 
 
216 aa  174  9e-43  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  45.29 
 
 
226 aa  174  9e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  41.94 
 
 
221 aa  173  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  46.33 
 
 
226 aa  173  1.9999999999999998e-42  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  40.93 
 
 
224 aa  173  1.9999999999999998e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  41.4 
 
 
216 aa  173  1.9999999999999998e-42  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_3337  two component transcriptional regulator, LuxR family  47.2 
 
 
254 aa  172  2.9999999999999996e-42  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0952095  normal  0.130531 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  41.31 
 
 
218 aa  172  2.9999999999999996e-42  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  44.14 
 
 
226 aa  172  2.9999999999999996e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_0651  two component transcriptional regulator, LuxR family  43.69 
 
 
241 aa  172  2.9999999999999996e-42  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  44.39 
 
 
225 aa  172  2.9999999999999996e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  43.89 
 
 
223 aa  172  3.9999999999999995e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  42.01 
 
 
221 aa  172  3.9999999999999995e-42  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  43.93 
 
 
213 aa  172  3.9999999999999995e-42  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  44.09 
 
 
234 aa  172  5e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  44 
 
 
225 aa  171  5.999999999999999e-42  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  44.05 
 
 
226 aa  171  6.999999999999999e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  42.53 
 
 
227 aa  171  9e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  43.18 
 
 
219 aa  171  9e-42  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  45.16 
 
 
216 aa  171  9e-42  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  44.8 
 
 
230 aa  171  9e-42  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  44.09 
 
 
253 aa  171  1e-41  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  44.19 
 
 
221 aa  171  1e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  44.65 
 
 
219 aa  170  1e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  44.91 
 
 
219 aa  171  1e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  42.79 
 
 
220 aa  171  1e-41  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  46.05 
 
 
215 aa  170  2e-41  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  44.7 
 
 
225 aa  170  2e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  44.95 
 
 
225 aa  170  2e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  43.12 
 
 
221 aa  170  2e-41  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  42.01 
 
 
223 aa  169  2e-41  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  45.75 
 
 
209 aa  169  3e-41  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  41.28 
 
 
230 aa  169  3e-41  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  42.24 
 
 
243 aa  169  3e-41  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  42.08 
 
 
225 aa  169  3e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  43.52 
 
 
224 aa  169  4e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  42.99 
 
 
231 aa  169  4e-41  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  45.16 
 
 
220 aa  169  4e-41  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
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