More than 300 homologs were found in PanDaTox collection
for query gene Glov_2791 on replicon NC_010814
Organism: Geobacter lovleyi SZ



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010814  Glov_2791  nickel-dependent hydrogenase large subunit  100 
 
 
482 aa  985    Geobacter lovleyi SZ  Bacteria  normal  0.119602  n/a   
 
 
-
 
NC_008554  Sfum_2716  nickel-dependent hydrogenase, large subunit  61.92 
 
 
479 aa  622  1e-177  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.892044  normal 
 
 
-
 
NC_007517  Gmet_1113  nickel-dependent hydrogenase, large subunit  60 
 
 
476 aa  593  1e-168  Geobacter metallireducens GS-15  Bacteria  normal  0.301961  normal 
 
 
-
 
NC_007413  Ava_4661  nickel-dependent hydrogenase, large subunit  59.92 
 
 
487 aa  588  1e-167  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2718  NAD-reducing hydrogenase, beta subunit  58.49 
 
 
478 aa  586  1e-166  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0092  nickel-dependent hydrogenase large subunit  59.33 
 
 
474 aa  584  1.0000000000000001e-165  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.643449 
 
 
-
 
NC_011726  PCC8801_0095  nickel-dependent hydrogenase large subunit  59.33 
 
 
474 aa  584  1.0000000000000001e-165  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_4160  nickel-dependent hydrogenase large subunit  59.54 
 
 
474 aa  580  1e-164  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_4043  nickel-dependent hydrogenase large subunit  60.5 
 
 
473 aa  577  1.0000000000000001e-163  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.0198059 
 
 
-
 
NC_009523  RoseRS_3539  nickel-dependent hydrogenase, large subunit  60.38 
 
 
474 aa  565  1e-160  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2476  nickel-dependent hydrogenase large subunit  59.34 
 
 
473 aa  563  1.0000000000000001e-159  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.795621  normal  0.410999 
 
 
-
 
NC_009767  Rcas_1368  nickel-dependent hydrogenase large subunit  60.5 
 
 
475 aa  551  1e-155  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2555  NAD-reducing hydrogenase HoxS beta subunit  57.11 
 
 
476 aa  538  1e-151  Synechococcus elongatus PCC 7942  Bacteria  normal  0.148056  normal 
 
 
-
 
NC_011661  Dtur_0078  nickel-dependent hydrogenase large subunit  52.41 
 
 
474 aa  530  1e-149  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_2102  nickel-dependent hydrogenase large subunit  50.84 
 
 
472 aa  476  1e-133  Halorhabdus utahensis DSM 12940  Archaea  normal  0.782605  n/a   
 
 
-
 
NC_002977  MCA0114  NAD-reducing hydrogenase, beta subunit  47.91 
 
 
494 aa  451  1e-125  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2250  nickel-dependent hydrogenase large subunit  47.15 
 
 
488 aa  438  1e-121  Thauera sp. MZ1T  Bacteria  normal  0.0169608  n/a   
 
 
-
 
NC_011666  Msil_2748  nickel-dependent hydrogenase large subunit  46.93 
 
 
488 aa  434  1e-120  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007614  Nmul_A1673  nickel-dependent hydrogenase, large subunit  46.15 
 
 
493 aa  429  1e-119  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.521628  n/a   
 
 
-
 
NC_010524  Lcho_1459  nickel-dependent hydrogenase large subunit  45.19 
 
 
504 aa  422  1e-117  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.720227 
 
 
-
 
NC_007908  Rfer_3855  nickel-dependent hydrogenase, large subunit  45.49 
 
 
507 aa  419  1e-116  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0982  nickel-dependent hydrogenase, large subunit  44.65 
 
 
487 aa  415  1e-114  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0531  putative nickel-dependent hydrogenase, large subunit  43.19 
 
 
504 aa  407  1.0000000000000001e-112  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1525  nickel-dependent hydrogenase, large subunit  43.12 
 
 
488 aa  403  1e-111  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00000894187  hitchhiker  0.00486844 
 
 
-
 
NC_008709  Ping_1215  nickel-dependent hydrogenase, large subunit  42.74 
 
 
499 aa  399  9.999999999999999e-111  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0417903 
 
 
-
 
NC_008726  Mvan_4113  nickel-dependent hydrogenase, large subunit  43.41 
 
 
489 aa  393  1e-108  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0509028  normal  0.183384 
 
 
-
 
NC_002936  DET0615  hydrogenase, group 3, VhuA subunit, putative  42.68 
 
 
479 aa  384  1e-105  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_553  nickel-dependent hydrogenase, group 3, large subunit  42.47 
 
 
479 aa  383  1e-105  Dehalococcoides sp. VS  Bacteria  normal  0.0139726  n/a   
 
 
-
 
NC_009455  DehaBAV1_0588  F420-non-reducing hydrogenase subunit A  42.41 
 
 
479 aa  383  1e-105  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000204108  n/a   
 
 
-
 
NC_008554  Sfum_2221  nickel-dependent hydrogenase, large subunit  42.51 
 
 
482 aa  380  1e-104  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.794889  normal  0.78316 
 
 
-
 
NC_009051  Memar_1007  nickel-dependent hydrogenase, large subunit  43.2 
 
 
455 aa  373  1e-102  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_0097  nickel-dependent hydrogenase large subunit  42.2 
 
 
475 aa  360  3e-98  Methanococcus aeolicus Nankai-3  Archaea  normal  0.325648  n/a   
 
 
-
 
NC_007517  Gmet_3320  nickel-dependent hydrogenase, large subunit  41.81 
 
 
473 aa  350  3e-95  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_2258  nickel-dependent hydrogenase large subunit  39.47 
 
 
486 aa  349  7e-95  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009135  MmarC5_0652  F420-non-reducing hydrogenase subunit A  40.48 
 
 
471 aa  348  2e-94  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0070  nickel-dependent hydrogenase large subunit  40.08 
 
 
471 aa  347  2e-94  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_012918  GM21_3972  nickel-dependent hydrogenase large subunit  40.13 
 
 
473 aa  346  6e-94  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000529156 
 
 
-
 
NC_002939  GSU2419  nickel-dependent hydrogenase, large subunit  41.03 
 
 
473 aa  345  1e-93  Geobacter sulfurreducens PCA  Bacteria  normal  0.954862  n/a   
 
 
-
 
NC_013385  Adeg_2013  nickel-dependent hydrogenase large subunit  39.01 
 
 
487 aa  342  5.999999999999999e-93  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3537  nickel-dependent hydrogenase, large subunit  41.59 
 
 
469 aa  342  1e-92  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1651  nickel-dependent hydrogenase, large subunit  38.35 
 
 
485 aa  340  2e-92  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3680  nickel-dependent hydrogenase large subunit  37.97 
 
 
509 aa  338  9.999999999999999e-92  Opitutus terrae PB90-1  Bacteria  normal  0.0782936  normal  0.503756 
 
 
-
 
NC_011146  Gbem_3884  nickel-dependent hydrogenase large subunit  40.47 
 
 
473 aa  338  1.9999999999999998e-91  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_0996  nickel-dependent hydrogenase large subunit  40.87 
 
 
418 aa  337  3.9999999999999995e-91  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_010814  Glov_1553  nickel-dependent hydrogenase large subunit  36.63 
 
 
479 aa  328  9e-89  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_0977  nickel-dependent hydrogenase large subunit  40.29 
 
 
418 aa  328  2.0000000000000001e-88  Methanococcus maripaludis C6  Archaea  normal  0.390644  n/a   
 
 
-
 
NC_009135  MmarC5_1712  F420-non-reducing hydrogenase subunit A  40.29 
 
 
418 aa  326  5e-88  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0969  nickel-dependent hydrogenase large subunit  40.29 
 
 
418 aa  325  1e-87  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009635  Maeo_1215  nickel-dependent hydrogenase large subunit  39.34 
 
 
418 aa  324  2e-87  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_008554  Sfum_1791  hydrogen dehydrogenase  38.41 
 
 
449 aa  322  9.000000000000001e-87  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_4314  nickel-dependent hydrogenase large subunit  37.35 
 
 
494 aa  315  9.999999999999999e-85  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4292  nickel-dependent hydrogenase large subunit  37.14 
 
 
494 aa  312  7.999999999999999e-84  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3954  nickel-dependent hydrogenase, large subunit  38.6 
 
 
449 aa  310  2.9999999999999997e-83  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.644029 
 
 
-
 
NC_007760  Adeh_4162  nickel-dependent hydrogenase, large subunit  36.73 
 
 
494 aa  298  1e-79  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0906302  n/a   
 
 
-
 
NC_009675  Anae109_4306  nickel-dependent hydrogenase large subunit  34.68 
 
 
498 aa  262  1e-68  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.891144  normal  0.552071 
 
 
-
 
NC_008639  Cpha266_2169  nickel-dependent hydrogenase, large subunit  30.75 
 
 
424 aa  179  8e-44  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_1929  nickel-dependent hydrogenase large subunit  30.89 
 
 
425 aa  172  9e-42  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_007514  Cag_0245  hydrogenase/sulfur reductase, alpha subunit  30.04 
 
 
426 aa  171  2e-41  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.392685  n/a   
 
 
-
 
NC_013926  Aboo_0080  nickel-dependent hydrogenase large subunit  30.57 
 
 
421 aa  170  6e-41  Aciduliprofundum boonei T469  Archaea  normal  0.303597  n/a   
 
 
-
 
NC_010803  Clim_2097  nickel-dependent hydrogenase large subunit  31.24 
 
 
424 aa  166  6.9999999999999995e-40  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1055  nickel-dependent hydrogenase large subunit  31.59 
 
 
432 aa  166  9e-40  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.620596 
 
 
-
 
NC_011060  Ppha_2499  nickel-dependent hydrogenase large subunit  30.09 
 
 
424 aa  166  1.0000000000000001e-39  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_0937  [NiFe] hydrogenase, alpha subunit, putative  32.01 
 
 
422 aa  165  2.0000000000000002e-39  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.952693  n/a   
 
 
-
 
NC_007777  Francci3_4496  nickel-dependent hydrogenase, large subunit  29.21 
 
 
430 aa  164  2.0000000000000002e-39  Frankia sp. CcI3  Bacteria  normal  0.401222  normal 
 
 
-
 
NC_010831  Cphamn1_2132  nickel-dependent hydrogenase large subunit  30.24 
 
 
425 aa  165  2.0000000000000002e-39  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.0448433  normal  0.0283043 
 
 
-
 
NC_013158  Huta_2605  nickel-dependent hydrogenase large subunit  30.85 
 
 
439 aa  163  5.0000000000000005e-39  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0537031  n/a   
 
 
-
 
NC_008578  Acel_1019  nickel-dependent hydrogenase, large subunit  30.53 
 
 
431 aa  163  6e-39  Acidothermus cellulolyticus 11B  Bacteria  normal  hitchhiker  0.00653003 
 
 
-
 
NC_013501  Rmar_2590  nickel-dependent hydrogenase large subunit  31.02 
 
 
433 aa  162  1e-38  Rhodothermus marinus DSM 4252  Bacteria  normal  0.282401  n/a   
 
 
-
 
NC_011884  Cyan7425_2660  Coenzyme F420 hydrogenase  28.51 
 
 
433 aa  161  2e-38  Cyanothece sp. PCC 7425  Bacteria  normal  0.041142  normal 
 
 
-
 
NC_008146  Mmcs_3416  nickel-dependent hydrogenase, large subunit  28.63 
 
 
430 aa  159  9e-38  Mycobacterium sp. MCS  Bacteria  normal  0.291194  n/a   
 
 
-
 
NC_008705  Mkms_3479  nickel-dependent hydrogenase, large subunit  28.63 
 
 
430 aa  159  9e-38  Mycobacterium sp. KMS  Bacteria  normal  0.441341  normal  0.0523033 
 
 
-
 
NC_009077  Mjls_3427  nickel-dependent hydrogenase, large subunit  28.63 
 
 
430 aa  159  1e-37  Mycobacterium sp. JLS  Bacteria  normal  normal  0.260108 
 
 
-
 
NC_007404  Tbd_1263  hypothetical protein  30.59 
 
 
433 aa  158  2e-37  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.321319  normal 
 
 
-
 
NC_011901  Tgr7_1138  nickel-dependent hydrogenase large subunit  29.22 
 
 
431 aa  155  1e-36  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3474  nickel-dependent hydrogenase large subunit  28.7 
 
 
432 aa  155  1e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.455292  normal 
 
 
-
 
NC_010581  Bind_0507  nickel-dependent hydrogenase large subunit  30.04 
 
 
429 aa  155  2e-36  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1256  nickel-dependent hydrogenase large subunit  27.39 
 
 
430 aa  149  8e-35  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A0452  coenzyme F420-reducing hydrogenase, alpha subunit  26.48 
 
 
456 aa  141  1.9999999999999998e-32  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_008942  Mlab_0015  coenzyme F420-reducing hydrogenase, alpha subunit  26.72 
 
 
455 aa  141  3e-32  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_008576  Mmc1_0884  nickel-dependent hydrogenase, large subunit  26.48 
 
 
432 aa  140  3.9999999999999997e-32  Magnetococcus sp. MC-1  Bacteria  normal  0.912975  normal  0.251676 
 
 
-
 
NC_007355  Mbar_A2287  coenzyme F420 hydrogenase, subunit alpha  26.62 
 
 
456 aa  137  4e-31  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.304616 
 
 
-
 
NC_013173  Dbac_1969  nickel-dependent hydrogenase large subunit  27.47 
 
 
514 aa  136  9e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.668451  n/a   
 
 
-
 
NC_006369  lpl2387  hypothetical protein  26.65 
 
 
430 aa  134  1.9999999999999998e-30  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009483  Gura_1122  nickel-dependent hydrogenase, large subunit  29.35 
 
 
425 aa  135  1.9999999999999998e-30  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_2332  nickel-dependent hydrogenase, large subunit  27.79 
 
 
469 aa  134  3e-30  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009135  MmarC5_0649  coenzyme F420-reducing hydrogenase, alpha subunit  27.37 
 
 
410 aa  134  3e-30  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_013385  Adeg_1231  nickel-dependent hydrogenase large subunit  26.9 
 
 
458 aa  134  3.9999999999999996e-30  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1787  nickel-dependent hydrogenase large subunit  25.87 
 
 
481 aa  132  1.0000000000000001e-29  Ammonifex degensii KC4  Bacteria  normal  0.993845  n/a   
 
 
-
 
NC_013552  DhcVS_120  Ni/Fe hydrogenase, large subunit  25.59 
 
 
526 aa  132  2.0000000000000002e-29  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp2532  hypothetical protein  26.11 
 
 
430 aa  131  2.0000000000000002e-29  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_002936  DET0110  [Ni/Fe] hydrogenase, group 1, large subunit, putative  26.09 
 
 
526 aa  131  3e-29  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4826  nickel-dependent hydrogenase large subunit  30.28 
 
 
428 aa  130  5.0000000000000004e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.106762  normal 
 
 
-
 
NC_008751  Dvul_1248  nickel-dependent hydrogenase, large subunit  28.8 
 
 
488 aa  130  7.000000000000001e-29  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.210122 
 
 
-
 
NC_012560  Avin_04400  Soluble nickel-dependent hydrogenase, large subunit, HoxH  28.29 
 
 
419 aa  127  5e-28  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_2174  nickel-dependent hydrogenase, large subunit  26.51 
 
 
455 aa  127  6e-28  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_014165  Tbis_1858  nickel-dependent hydrogenase large subunit  27.57 
 
 
428 aa  126  1e-27  Thermobispora bispora DSM 43833  Bacteria  normal  0.940457  normal 
 
 
-
 
NC_009455  DehaBAV1_0258  nickel-dependent hydrogenase, large subunit  24.91 
 
 
526 aa  125  2e-27  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1042  nickel-dependent hydrogenase, large subunit  25.9 
 
 
485 aa  123  9e-27  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.90765  n/a   
 
 
-
 
NC_011769  DvMF_0273  nickel-dependent hydrogenase large subunit  27.81 
 
 
488 aa  122  9.999999999999999e-27  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.328721 
 
 
-
 
NC_011832  Mpal_0084  coenzyme F420 hydrogenase, subunit alpha  26.33 
 
 
455 aa  121  3e-26  Methanosphaerula palustris E1-9c  Archaea  decreased coverage  0.0042117  normal  0.0638209 
 
 
-
 
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