More than 300 homologs were found in PanDaTox collection
for query gene Ent638_3232 on replicon NC_009436
Organism: Enterobacter sp. 638



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009436  Ent638_3232  transcriptional regulator  100 
 
 
274 aa  548  1e-155  Enterobacter sp. 638  Bacteria  normal  0.0360083  normal  0.0600235 
 
 
-
 
NC_009457  VC0395_A1373  hypothetical protein  40.94 
 
 
278 aa  214  9.999999999999999e-55  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0283  transcriptional regulator, RpiR family  32.53 
 
 
279 aa  144  2e-33  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_5684  putative transcriptional regulator, RpiR family  34.13 
 
 
299 aa  144  2e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0287132  normal  0.474804 
 
 
-
 
NC_008010  Dgeo_2619  RpiR family transcriptional regulator  34.45 
 
 
286 aa  143  3e-33  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_35980  transcriptional regulator, RpiR family  32.14 
 
 
333 aa  142  7e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.309329  normal  0.261129 
 
 
-
 
NC_007333  Tfu_2323  putative transcriptional regulator  32.21 
 
 
315 aa  141  9.999999999999999e-33  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0269  transcriptional regulator, RpiR family  31.54 
 
 
304 aa  138  1e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  0.409833  n/a   
 
 
-
 
NC_010003  Pmob_0521  RpiR family transcriptional regulator  31.58 
 
 
283 aa  137  2e-31  Petrotoga mobilis SJ95  Bacteria  normal  0.207231  n/a   
 
 
-
 
NC_009953  Sare_3209  RpiR family transcriptional regulator  31.27 
 
 
320 aa  135  5e-31  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_3960  RpiR family transcriptional regulator  32.23 
 
 
304 aa  135  6.0000000000000005e-31  Salinispora arenicola CNS-205  Bacteria  normal  0.162661  normal  0.59815 
 
 
-
 
NC_010320  Teth514_0168  RpiR family transcriptional regulator  28.46 
 
 
280 aa  135  9e-31  Thermoanaerobacter sp. X514  Bacteria  normal  0.057217  n/a   
 
 
-
 
NC_013515  Smon_1050  transcriptional regulator, RpiR family  27.47 
 
 
272 aa  133  3e-30  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_4516  transcriptional regulator, RpiR family  31.37 
 
 
322 aa  131  1.0000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.937314 
 
 
-
 
NC_008781  Pnap_0652  RpiR family transcriptional regulator  32.17 
 
 
281 aa  131  1.0000000000000001e-29  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.334737  normal  0.0629992 
 
 
-
 
NC_008309  HS_0696  RpiR family transcriptional regulator  26.87 
 
 
289 aa  130  2.0000000000000002e-29  Haemophilus somnus 129PT  Bacteria  hitchhiker  0.000925251  n/a   
 
 
-
 
NC_007794  Saro_1547  RpiR family transcriptional regulator  30.86 
 
 
296 aa  129  4.0000000000000003e-29  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0475  transcriptional regulator, RpiR family  31.5 
 
 
327 aa  128  8.000000000000001e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.227753  normal 
 
 
-
 
NC_013517  Sterm_2433  transcriptional regulator, RpiR family  27.17 
 
 
282 aa  127  1.0000000000000001e-28  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00000784459  n/a   
 
 
-
 
NC_011661  Dtur_1776  transcriptional regulator, RpiR family  26.59 
 
 
281 aa  127  1.0000000000000001e-28  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1993  transcriptional regulator, RpiR family  26.95 
 
 
280 aa  127  2.0000000000000002e-28  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A1192  transcriptional regulator, RpiR family  31.15 
 
 
293 aa  127  2.0000000000000002e-28  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.497061  normal  0.760306 
 
 
-
 
NC_013510  Tcur_4022  transcriptional regulator, RpiR family  28.63 
 
 
320 aa  127  2.0000000000000002e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0204031  n/a   
 
 
-
 
NC_011312  VSAL_I0898  HTH-type transcriptional regulator, rpiR family  27.31 
 
 
292 aa  126  3e-28  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.679683  n/a   
 
 
-
 
NC_009380  Strop_2984  sugar isomerase (SIS)  30.96 
 
 
319 aa  127  3e-28  Salinispora tropica CNB-440  Bacteria  normal  normal  0.389067 
 
 
-
 
NC_011083  SeHA_C1237  RpiR family transcriptional regulator  30.74 
 
 
293 aa  125  5e-28  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.676137 
 
 
-
 
NC_011205  SeD_A1202  RpiR family transcriptional regulator  30.74 
 
 
293 aa  125  5e-28  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.658823 
 
 
-
 
NC_011080  SNSL254_A1222  RpiR family transcriptional regulator  30.74 
 
 
293 aa  125  5e-28  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.514843 
 
 
-
 
NC_007948  Bpro_0750  RpiR family transcriptional regulator  32.06 
 
 
281 aa  125  6e-28  Polaromonas sp. JS666  Bacteria  normal  0.414867  normal  0.513903 
 
 
-
 
NC_010001  Cphy_3564  RpiR family transcriptional regulator  29.17 
 
 
284 aa  125  8.000000000000001e-28  Clostridium phytofermentans ISDg  Bacteria  normal  0.536409  n/a   
 
 
-
 
NC_013947  Snas_2756  transcriptional regulator, RpiR family  29.81 
 
 
298 aa  125  9e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.688512  normal 
 
 
-
 
NC_011725  BCB4264_A2246  transcriptional regulator, RpiR family  28.92 
 
 
284 aa  124  1e-27  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2088  RpiR family transcriptional regulator  29.96 
 
 
284 aa  124  2e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0949278  n/a   
 
 
-
 
NC_011772  BCG9842_B3077  transcriptional regulator, RpiR family  28.92 
 
 
284 aa  124  2e-27  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.0000143664 
 
 
-
 
NC_012669  Bcav_1394  transcriptional regulator, RpiR family  31.03 
 
 
285 aa  123  3e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0784467  normal  0.640102 
 
 
-
 
NC_003909  BCE_2295  RpiR family transcriptional regulator  28.92 
 
 
284 aa  123  3e-27  Bacillus cereus ATCC 10987  Bacteria  normal  0.651664  n/a   
 
 
-
 
NC_008261  CPF_0182  RpiR family transcriptional regulator  25.66 
 
 
279 aa  122  6e-27  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0179  RpiR family transcriptional regulator  25.66 
 
 
279 aa  122  7e-27  Clostridium perfringens SM101  Bacteria  normal  0.912597  n/a   
 
 
-
 
NC_007963  Csal_3272  RpiR family transcriptional regulator  32.4 
 
 
289 aa  121  9.999999999999999e-27  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.854433  n/a   
 
 
-
 
NC_009674  Bcer98_1662  RpiR family transcriptional regulator  28.92 
 
 
284 aa  121  9.999999999999999e-27  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.574027  n/a   
 
 
-
 
NC_010084  Bmul_2433  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
642 aa  117  1.9999999999999998e-25  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.399098  normal 
 
 
-
 
NC_009080  BMA10247_2002  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
620 aa  117  1.9999999999999998e-25  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2853  transcriptional regulator, RpiR family  32.88 
 
 
316 aa  117  1.9999999999999998e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.543302 
 
 
-
 
NC_007434  BURPS1710b_3090  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
641 aa  117  1.9999999999999998e-25  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3055  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
641 aa  117  1.9999999999999998e-25  Burkholderia pseudomallei 1106a  Bacteria  normal  0.570164  n/a   
 
 
-
 
NC_009074  BURPS668_3001  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
641 aa  117  1.9999999999999998e-25  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1550  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
641 aa  117  1.9999999999999998e-25  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0825  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
642 aa  117  1.9999999999999998e-25  Burkholderia ambifaria AMMD  Bacteria  normal  0.125163  n/a   
 
 
-
 
NC_008836  BMA10229_A2612  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
620 aa  117  1.9999999999999998e-25  Burkholderia mallei NCTC 10229  Bacteria  normal  0.85018  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0778  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
620 aa  117  1.9999999999999998e-25  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1122  RpiR family transcriptional regulator  24.71 
 
 
285 aa  116  3e-25  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2132  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
641 aa  116  3e-25  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0837  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
642 aa  117  3e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0926  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
642 aa  116  3.9999999999999997e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.789642  normal 
 
 
-
 
NC_010159  YpAngola_A2771  RpiR family transcriptional regulator  27.76 
 
 
292 aa  116  3.9999999999999997e-25  Yersinia pestis Angola  Bacteria  normal  hitchhiker  0.00114132 
 
 
-
 
NC_007510  Bcep18194_A4068  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
642 aa  116  3.9999999999999997e-25  Burkholderia sp. 383  Bacteria  normal  0.0150237  normal 
 
 
-
 
NC_008060  Bcen_0486  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
642 aa  116  3.9999999999999997e-25  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0965  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
642 aa  116  3.9999999999999997e-25  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0899614  n/a   
 
 
-
 
NC_012669  Bcav_0151  transcriptional regulator, RpiR family  32.92 
 
 
299 aa  116  5e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.15102  normal 
 
 
-
 
NC_008836  BMA10229_A1223  RpiR family transcriptional regulator  31.52 
 
 
339 aa  116  5e-25  Burkholderia mallei NCTC 10229  Bacteria  normal  0.809611  n/a   
 
 
-
 
NC_006348  BMA2447  RpiR family transcriptional regulator  31.52 
 
 
332 aa  115  5e-25  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2634  RpiR family transcriptional regulator  31.52 
 
 
332 aa  115  5e-25  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1124  RpiR family transcriptional regulator  30.23 
 
 
282 aa  116  5e-25  Rhodoferax ferrireducens T118  Bacteria  normal  0.673079  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0365  RpiR family transcriptional regulator  31.52 
 
 
332 aa  115  5e-25  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3409  RpiR family transcriptional regulator  31.91 
 
 
332 aa  115  6e-25  Burkholderia pseudomallei 668  Bacteria  normal  0.977628  n/a   
 
 
-
 
NC_009076  BURPS1106A_3444  RpiR family transcriptional regulator  31.91 
 
 
332 aa  115  6e-25  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1025  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
638 aa  115  6e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  0.745776  normal  0.175715 
 
 
-
 
NC_007434  BURPS1710b_3444  RpiR family transcriptional regulator  31.91 
 
 
339 aa  115  6e-25  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1297  RpiR family transcriptional regulator  27.76 
 
 
292 aa  115  6.9999999999999995e-25  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1216  RpiR family transcriptional regulator  31.91 
 
 
334 aa  115  6.9999999999999995e-25  Burkholderia thailandensis E264  Bacteria  normal  0.3152  n/a   
 
 
-
 
NC_007951  Bxe_A3454  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
638 aa  115  6.9999999999999995e-25  Burkholderia xenovorans LB400  Bacteria  normal  0.0454105  normal  0.179776 
 
 
-
 
NC_010465  YPK_1406  RpiR family transcriptional regulator  27.76 
 
 
292 aa  115  6.9999999999999995e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0625  bifunctional glucokinase/RpiR family transcriptional regulator  30.62 
 
 
639 aa  115  7.999999999999999e-25  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0694  RpiR family transcriptional regulator  30.23 
 
 
281 aa  115  7.999999999999999e-25  Acidovorax sp. JS42  Bacteria  normal  hitchhiker  0.00592918 
 
 
-
 
NC_010678  Rpic_4864  transcriptional regulator, RpiR family  32.59 
 
 
280 aa  114  1.0000000000000001e-24  Ralstonia pickettii 12J  Bacteria  normal  normal  0.403808 
 
 
-
 
NC_012857  Rpic12D_3787  transcriptional regulator, RpiR family  32.59 
 
 
280 aa  114  1.0000000000000001e-24  Ralstonia pickettii 12D  Bacteria  normal  0.925929  normal 
 
 
-
 
NC_010524  Lcho_3388  RpiR family transcriptional regulator  33.05 
 
 
284 aa  114  1.0000000000000001e-24  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011992  Dtpsy_0672  transcriptional regulator, RpiR family  30.23 
 
 
281 aa  114  1.0000000000000001e-24  Acidovorax ebreus TPSY  Bacteria  normal  0.654483  n/a   
 
 
-
 
NC_013947  Snas_3507  transcriptional regulator, RpiR family  27.86 
 
 
342 aa  114  2.0000000000000002e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0619346 
 
 
-
 
NC_009654  Mmwyl1_1082  DNA-binding transcriptional regulator HexR  27.38 
 
 
288 aa  113  3e-24  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.000000474941  unclonable  0.00000000000467577 
 
 
-
 
NC_008786  Veis_2083  RpiR family transcriptional regulator  32.67 
 
 
285 aa  113  3e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0788875 
 
 
-
 
NC_013203  Apar_1200  transcriptional regulator, RpiR family  28.79 
 
 
304 aa  113  3e-24  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_0580  RpiR family transcriptional regulator  29.96 
 
 
282 aa  113  4.0000000000000004e-24  Burkholderia ambifaria MC40-6  Bacteria  normal  0.658912  normal  0.89076 
 
 
-
 
NC_008390  Bamb_0554  RpiR family transcriptional regulator  29.96 
 
 
282 aa  113  4.0000000000000004e-24  Burkholderia ambifaria AMMD  Bacteria  normal  0.335525  n/a   
 
 
-
 
NC_009674  Bcer98_0668  RpiR family transcriptional regulator  31.14 
 
 
287 aa  112  5e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3745  RpiR family transcriptional regulator  29.96 
 
 
282 aa  112  6e-24  Burkholderia sp. 383  Bacteria  normal  normal  0.767556 
 
 
-
 
NC_012793  GWCH70_1468  transcriptional regulator, RpiR family  26.17 
 
 
286 aa  112  7.000000000000001e-24  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000610661  n/a   
 
 
-
 
NC_012669  Bcav_1348  transcriptional regulator, RpiR family  30.2 
 
 
307 aa  111  1.0000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.478547  normal  0.506779 
 
 
-
 
NC_010508  Bcenmc03_0626  RpiR family transcriptional regulator  29.96 
 
 
282 aa  111  1.0000000000000001e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_0176  RpiR family transcriptional regulator  29.96 
 
 
282 aa  111  1.0000000000000001e-23  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2049  DNA-binding transcriptional regulator HexR  27.95 
 
 
284 aa  111  1.0000000000000001e-23  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000665792  normal  0.388652 
 
 
-
 
NC_008542  Bcen2424_0659  RpiR family transcriptional regulator  29.96 
 
 
282 aa  111  1.0000000000000001e-23  Burkholderia cenocepacia HI2424  Bacteria  normal  0.78991  n/a   
 
 
-
 
NC_013171  Apre_1544  transcriptional regulator, RpiR family  24.41 
 
 
279 aa  111  1.0000000000000001e-23  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0941  RpiR family transcriptional regulator  30.23 
 
 
281 aa  111  1.0000000000000001e-23  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0472093  normal  0.387072 
 
 
-
 
NC_008786  Veis_1778  RpiR family transcriptional regulator  30.23 
 
 
281 aa  110  2.0000000000000002e-23  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.141472  normal 
 
 
-
 
NC_007951  Bxe_A0588  RpiR family transcriptional regulator  31.9 
 
 
273 aa  110  2.0000000000000002e-23  Burkholderia xenovorans LB400  Bacteria  normal  0.189062  normal 
 
 
-
 
NC_010622  Bphy_2581  RpiR family transcriptional regulator  31.75 
 
 
278 aa  110  2.0000000000000002e-23  Burkholderia phymatum STM815  Bacteria  normal  0.0624506  hitchhiker  0.000000255705 
 
 
-
 
NC_008709  Ping_2360  DNA-binding transcriptional regulator HexR  28.11 
 
 
286 aa  110  2.0000000000000002e-23  Psychromonas ingrahamii 37  Bacteria  normal  hitchhiker  0.00190607 
 
 
-
 
NC_007963  Csal_2742  DNA-binding transcriptional regulator HexR  28.24 
 
 
286 aa  110  3e-23  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_1355  transcriptional regulator  27.13 
 
 
273 aa  109  4.0000000000000004e-23  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.906845  n/a   
 
 
-
 
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