| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3507 |
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| Symbol | |
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| ID | 8884706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 3716553 |
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| End bp | 3717581 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | transcriptional regulator, RpiR family |
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| Protein accession | YP_003512263 |
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| Protein GI | 291300985 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0619346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTCCCA CTGAACGAGC CGATCCCCGC ACCGTCCTGG TGCGGGTGCG CGCCGCCCTG
CCCGGCCTGC GGCCCTCCGA ACGCCGGATC GCCGAGGCGA TCCTGGACGA CCCGCACGCG
ACCGCCGGAC TCACGGTCGC CGAACTGGCC GCCGCCTGCG ACACCTCGAC CACCACCGTG
GTGCGCTTCT ACCAGCGCAT CGGCTACGGC CGTTACAAGG ACCTCCGCCT TGACCTCACC
CGGGAGGCCA CCCGCGAACA ACTCGAGACG GCGAACCTGC CCGCCGCGTC CGGCGACATC
GACCGCGACG ACACCATCGA CGACATCATC GCGAAGGTGG CGGCCAACGA GACGCTGTCC
ATCGCCGACA CCGCCGAAAT CCTCGACCGG GACGCCCTCG CGCGCGCCGT CGACTGTGTC
CTCAACGCCC GCCGCGTCGA CAGCTTCGGC GTGGGCGCCA GCGGTTTCGT GGGCCTCGAC
CTGCAACAGA AACTGACCCG CATCGGCCGC ACCGCACTGT CCTGGCTGGA CACCGACGCC
GCCTGGTCGG CCGCGGTCAC CCTGGACGAG CAGTGCGTCG CCATCGCGAT CTCGCACACC
GGCACCACCG CGGCCACCGT CGAGTTCCTG GCCATGGCCG CGGCCGAAGG CGCCACCACC
ATCGCGATCA CCAACCACGA CAACACCGCC CTGGCCGAGA CCGCCGACGT CGTGCTCACC
ACCGCCGCCC GCGAGACCCG GTTCCGCTCC GGCGCGCTGG GCAGCAGAAT CGCCCAGCTC
ATGGTGGTCG ACTGCCTGTT CACCGGGGTG GCGCGGGCGT CATACGACGC ATCGATGTCG
GCGCTGCGCA AGACCTACGC GGCCGTGCAC CGCAAGGGCC GTGGACAGCG GTTATATCGC
CGGATCGTTA TTCGGCGCCG ACGGCCGGGA TCTCACTGGG TTCGGGCGTA CCCGCGGTGG
CGCGCCACAG ACCGAACGCA CCGAGCCCGA GGACCGCCGC AACGAGGAGA ACCGACGCGA
AACGCTTGA
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| Protein sequence | MCPTERADPR TVLVRVRAAL PGLRPSERRI AEAILDDPHA TAGLTVAELA AACDTSTTTV
VRFYQRIGYG RYKDLRLDLT REATREQLET ANLPAASGDI DRDDTIDDII AKVAANETLS
IADTAEILDR DALARAVDCV LNARRVDSFG VGASGFVGLD LQQKLTRIGR TALSWLDTDA
AWSAAVTLDE QCVAIAISHT GTTAATVEFL AMAAAEGATT IAITNHDNTA LAETADVVLT
TAARETRFRS GALGSRIAQL MVVDCLFTGV ARASYDASMS ALRKTYAAVH RKGRGQRLYR
RIVIRRRRPG SHWVRAYPRW RATDRTHRAR GPPQRGEPTR NA
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