Gene Bcen_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0176 
Symbol 
ID4091822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp183419 
End bp184267 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content70% 
IMG OID638013436 
ProductRpiR family transcriptional regulator 
Protein accessionYP_620063 
Protein GI107021736 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCCCC GCATTGAAGC GATCCGCGCC GAGTTGCGCC CGTCCGAGCG CAAGCTCGCC 
GACTACATCC TCGCCGCGCC GCGCGAGGTG CTCGACCTCG CGATGACCGA GCTGTCGATG
CGCGCCGGCG TCAGCCAGCC GACCATCGCG CGCTTCTGCC AGGCGCTCGG CTGCAGCGGC
TTTCGCGAAT TCAAGATCCG GCTCGCGCAG AGCGTCGCGC CGGGCGTGTC GTCGGTGTAC
CGCGACGTCG AGCCGAACGA ACCGGCACCC GGCATCATCG GCAAGGTGTT CGACCGCACG
ATCGGCGCGC TGATCGAAGT ACGCAACAGC CTGTCCGCGG GCAGCGTCGC CGACGCGATC
GCGCTGCTGT CGAACGCGTC GCGCATCGAG TTCTACGGCG CCGGCGGCTC GGGCATCGCC
GCGCAGGACA TCCAGCACAA GTTCTTCCGG CTCGGCGTGC CGAGCGTCGC GTATTCGGAC
CCGCACACGT TCTCGATGTC GTCGGCGCTG CTCGGGCCGC ACGACGTCGT CGTCGCGATC
TCGAACACCG GCCGCACGCG CGACATCGTC GACGCCGCGC GCTCCGCGCT CGCGTGCGGC
GCGAAAGTCG TCGCGATCAC GCAGAGCCAT TCGCCGCTCG CGAAGCTCGC GACGGTCAGC
CTCGCGTCGA ACGTCGCCGA GGAAACGGAC GTGTTCTCGC CGATGACGTC GCGGATGTCG
CATCTCGCGA TCGGCGACAT CCTCGCGGTC GGCGTCGCGC TGTCGCGCGG GCCGGCGCTG
ATGGAGCGCG TCGGCCGCGC GAAGGAAGCG ATCACGCGCA GGCGGATCGA CGATCCGACG
AAGGAGTAG
 
Protein sequence
MLPRIEAIRA ELRPSERKLA DYILAAPREV LDLAMTELSM RAGVSQPTIA RFCQALGCSG 
FREFKIRLAQ SVAPGVSSVY RDVEPNEPAP GIIGKVFDRT IGALIEVRNS LSAGSVADAI
ALLSNASRIE FYGAGGSGIA AQDIQHKFFR LGVPSVAYSD PHTFSMSSAL LGPHDVVVAI
SNTGRTRDIV DAARSALACG AKVVAITQSH SPLAKLATVS LASNVAEETD VFSPMTSRMS
HLAIGDILAV GVALSRGPAL MERVGRAKEA ITRRRIDDPT KE