Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcur_4022 |
Symbol | |
ID | 8605378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermomonospora curvata DSM 43183 |
Kingdom | Bacteria |
Replicon accession | NC_013510 |
Strand | - |
Start bp | 4594017 |
End bp | 4594979 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transcriptional regulator, RpiR family |
Protein accession | YP_003301589 |
Protein GI | 269128219 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0204031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAAAA CCAACGGCCG AGACACAGGG GGCCACGGGG ATACCGGCGC GCCCCCGGCG GCCTCGCGCT CCACCAAGGA GGCGCCGCTC AGCACCGTGG TGCGGGTGCG CTCGCTGCTG CCGTCGCTGC CGCCCGCCGA ACGCCGGGTC GCCCAGCGGG TGATCGACGA CCCCGAGGGG GTCGCCAACT CCACCATCAC CGAGCTCGCA CACGCCTGCG GGACGTCGGA GACCACCGTG ATCCGGTTCT GCCGGGCCAT CGGCTTCACC GGCTACCCGG AGCTGCGGCT GACGCTGGCC ACCGAGGCCG GCCGGGCGCA GAGCGTCTCC GGGGGGCGGG TCATCGGCAG TGACATCAGC CCCGACGACT CCCTGGAGGA GATCGTCGAG AAGGTGACCT TCGCCGACGC CCGCGCGGTC GAGGAGACCG CCGCCCAGCT CGACATCAAG GTGCTGGAAC AGGTGATCGA CGCGGTGGTC GCCGCCTCCC GGGTGGACGT CTACGGAGTC GGCGCCAGCG CCTTCGTGGC CATGGACTTC CAGCAGAAGC TGCACCGCAT CGGCCGGCAC TGCTCGGCCT GGTCGGACGC GCACATCATG CTGACCAGCG CCGCCGTGCT CAATCCGGGG GACGTGGCGA TGGGCATCTC GCACACCGGC GCCACGGTGG AGACCATCGA CGCGCTCGCG GTGGCCAAGG GACGAGGGGT CACCACAGTG GCCGTCACCA ACTTCCCCAA GTCCCCGATC GCCGAGGTGG CCGACCTGGT GCTGACCACC GCGGCCCGCG AGACCACCTT CCGCTCCGGC GCCACCGCCA GCCGGCTGGC CCAGCTCACC GTGATCGACT GCGTCTTCGT GGGCGTCGCG CAGCGCACCT ACGCCACCAC CCGCAAAGCG CTGGAGGCCA CCTACGAGGC GGTCCGCAGC CGTACGGTAC GACCCGATCG GAGGCGCCGG TGA
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Protein sequence | MRKTNGRDTG GHGDTGAPPA ASRSTKEAPL STVVRVRSLL PSLPPAERRV AQRVIDDPEG VANSTITELA HACGTSETTV IRFCRAIGFT GYPELRLTLA TEAGRAQSVS GGRVIGSDIS PDDSLEEIVE KVTFADARAV EETAAQLDIK VLEQVIDAVV AASRVDVYGV GASAFVAMDF QQKLHRIGRH CSAWSDAHIM LTSAAVLNPG DVAMGISHTG ATVETIDALA VAKGRGVTTV AVTNFPKSPI AEVADLVLTT AARETTFRSG ATASRLAQLT VIDCVFVGVA QRTYATTRKA LEATYEAVRS RTVRPDRRRR
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