| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1544 |
|---|
| Symbol | |
|---|
| ID | 8398356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1680500 |
|---|
| End bp | 1681339 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 644995908 |
|---|
| Product | transcriptional regulator, RpiR family |
|---|
| Protein accession | YP_003153286 |
|---|
| Protein GI | 257067030 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTACA CAATAAAAAT TAAAGAAAGA TCAGAAGATT TTACACCTTC TGATACGAAA
ATTGCAAAAT ATATTCTTGA TAAACCCGGA GAGGTAATAA AGATTAACTC TCAAAAACTC
GCGGATTTAA CTGGAACGTC ACAATCAGCC ATAATAAGAT TTGTTCAAAA AATAGGATAT
AAGGGATACA CCTCGCTTAA GCTAGATATA GCAAAAAGCC TAGAAAATGA TGAAATAAAC
CTTAAGTCAG AAGTGATTTC GGCGGATGAT AAGGTAGGAG ATATAATAGA AAAAAGCAAA
ATCAATGTAA TATCATCAAT AGAAAAGACC TACGCTCTAA TAGATGAAGA TCAAATCTCA
AAGGCAATTG ATAATATTGT ATATGCTAAC TTCGTCTATC TAGCTGGGAT TGGATCTTCA
GGACTAGTAT GTGAGGATTT TCTCTATAAG CTTCAAAGAT CAGGCAAGAA GGCCTTTTAT
GAGACAGATG CCCATACAAA TTTAAGTTTA CTGACAAATA TCAAGGAAGA CGACCTATTA
ATTTGTATTA CTTACACTGC TCTTTCAAAA GAAGTATTGA TAGCTGCAGA ATATGCTAAA
ACGATTGGTG CAAAACTAAT AAGTATTACA AAAGCTGGTC GAGGAAAACT CGCTAATATG
TCAGATATCC TAATACCTAT CCCTGAAATT GAAAAAAAGA TGAGGTACGG TGCAATTTCA
TCTAGATTTG CTTCGCAAAT AATAACAGAT ATCTTATTCT ATGGCTATAT ATCAAAAAAT
ATGGACGAAG TGGTAAAAAA TCTTATGGTT TCTAAAGAAC TAACTGATAA ATTAAAATAG
|
|---|
| Protein sequence | MTYTIKIKER SEDFTPSDTK IAKYILDKPG EVIKINSQKL ADLTGTSQSA IIRFVQKIGY
KGYTSLKLDI AKSLENDEIN LKSEVISADD KVGDIIEKSK INVISSIEKT YALIDEDQIS
KAIDNIVYAN FVYLAGIGSS GLVCEDFLYK LQRSGKKAFY ETDAHTNLSL LTNIKEDDLL
ICITYTALSK EVLIAAEYAK TIGAKLISIT KAGRGKLANM SDILIPIPEI EKKMRYGAIS
SRFASQIITD ILFYGYISKN MDEVVKNLMV SKELTDKLK
|
|---|
| |