| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1373 |
|---|
| Symbol | |
|---|
| ID | 5137703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 1478334 |
|---|
| End bp | 1479170 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640532831 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001217316 |
|---|
| Protein GI | 147675662 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATTTGC CTAAAAATCT GATGGTTCGA TTGCGCTCGA ATACCGAACC TTTGAGCAAA
AAACTCAGAG TTGTTGCTGA TTATGTGCTC GAAAATGCAC ATGAAGTTCA GTATCAGACG
ATCACCGATC TAGCGTTTAA TACAAAAACA AGCGAAGCCA CTGTAGTCAG GCTATGCCGT
GATTTGGGCT ACAAAGGTTA TTCGGATTTT AGAATGGCAT TGGCGGTTGA TCTTAGTCAG
TCTGCAAACC AATCTCAGCC CAAAATGGAT GGCGATATTT GCGAAGTTTC TGCGCAAAGC
GCGGTAGATA GTTTAATGGA TACTGCAAAA CTGATAGACA GAGCTGCCTT AAATAGAATA
TGTGAGTTGG TTCATGGGGC TAAGTTTATT GGGTGTGTTG GTGTGGGAGC ATCCAGTATC
GTCGGTCGCT ATTTGGCGTA CCGATTAGTG AGAATAGGTA AAAAAGCCAT CATGTATGAA
GATACACACT TGGCGGCAAT GAGTGCTGGA CAGAGTGTTG TCGGGGATGC ATGGTTTGCA
ATATCGAGCT CAGGTTCTAC AAAAGAGGTG GTTCATGCGG CCACCCAGGC TCATCAACGC
GGTGTGCCAG TTGTATCTCT TACGAATATT AGCCATAGCC CACTTTCTTC GATTTCAGAT
GAAATGTTAG TGGCTGCAAG GCCTGAAGGC CCTCTCACTG GCGGTGCTTT TTCTTCTAAA
GTTGGTGCTT TGTTGCTTGT TGATGTTTTG ATTAACACAC TTTTAGATGT ATATCCTGAA
TATTCAGCCT CCGTATTTGG TACTGCGGAA GTGATTTTAC CTTTAATGGA TAGTTAA
|
|---|
| Protein sequence | MNLPKNLMVR LRSNTEPLSK KLRVVADYVL ENAHEVQYQT ITDLAFNTKT SEATVVRLCR
DLGYKGYSDF RMALAVDLSQ SANQSQPKMD GDICEVSAQS AVDSLMDTAK LIDRAALNRI
CELVHGAKFI GCVGVGASSI VGRYLAYRLV RIGKKAIMYE DTHLAAMSAG QSVVGDAWFA
ISSSGSTKEV VHAATQAHQR GVPVVSLTNI SHSPLSSISD EMLVAARPEG PLTGGAFSSK
VGALLLVDVL INTLLDVYPE YSASVFGTAE VILPLMDS
|
|---|
| |