| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2581 |
|---|
| Symbol | |
|---|
| ID | 6244064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 2903074 |
|---|
| End bp | 2903910 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642594370 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_001858799 |
|---|
| Protein GI | 186477329 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0624506 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000000255705 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTCTC AGGTGGAAGC GATGCGCGAC CAGATGCGCC CTTCGGAACG CAAGCTCGCC
GACTACGTGA TGGAAGCGCC GCGCGAGGTG CTCGACCTGT CGATGACGGA GGTGGCCGCA
CGCGCGGGCG TGAGCCAGCC GACCATTGCG CGCTTCTGCC ACGCGCTCGG TTTTTCCGGC
TTCCGCGAGT TCAAGATCCG GCTCGCCCAA GGTATAGCAA CGCAGGTGCC CGCCGTTTAT
CGCGACGTGC GGCCCGACGA ACCCGCGCCG GGCGTCGCGG CGAAGGTGCT GGACCGGACG
ATCGGCGCGC TCATCCAGGT GCGCAACAAT CTGTCGTCCG ATAGCGTCGC GGCGGCGATC
GAGCTTCTGG CGAACGCAAA ACGCGTCGAG TTCTATGGCG CGGGCGGCTC GGGCATTGCC
GCGCTCGATA TGCAGCACAA GTTCTTCCGG CTGGGCATGC CGAGCGTCGC GTATTCGGAT
CCGCACACGT TTCTTATGTC GGCGGCATTG CTCGGCGAAG GCGATGTCGT CGTGGCCATT
TCGAACACAG GCCGCACGCG CGACATCATC GACGCCGCCC GGTCAGCGAT GAAGGCGGGC
GCGAAGGTGA TTGCCGTGAC ACACGGGAAT TCGCCGCTCG CGCGGGTTGC GTCGATTGGA
CTCTTCGCGA ATGTCGACGA AGACACCGAC ATCTTTTCGC CGATGACGTC GCGCACATCG
CATCTGGCGA TCGGCGATAT CCTGGCGGTC GGCGTCGCGT TGCATCGCGG GCCGGACTTG
GCGGAGAAGC TGGCTGGGGC AAAAGATCTG ATTGCGCAGC GCAGGGTTGG CGGGTAA
|
|---|
| Protein sequence | MLSQVEAMRD QMRPSERKLA DYVMEAPREV LDLSMTEVAA RAGVSQPTIA RFCHALGFSG
FREFKIRLAQ GIATQVPAVY RDVRPDEPAP GVAAKVLDRT IGALIQVRNN LSSDSVAAAI
ELLANAKRVE FYGAGGSGIA ALDMQHKFFR LGMPSVAYSD PHTFLMSAAL LGEGDVVVAI
SNTGRTRDII DAARSAMKAG AKVIAVTHGN SPLARVASIG LFANVDEDTD IFSPMTSRTS
HLAIGDILAV GVALHRGPDL AEKLAGAKDL IAQRRVGG
|
|---|
| |