| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2323 |
|---|
| Symbol | |
|---|
| ID | 3581243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 2733365 |
|---|
| End bp | 2734312 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637686034 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_290379 |
|---|
| Protein GI | 72162722 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGA TGGCGAAGAG AAGCGACAAC GACGGTGTTC TCCCGCCCAA GGAGGGCGGC
GCCACACCCA GCACGGTGCT GAAGATCCGC TCGTTGTTGC CCTCCCTGGC GCCCGCCGAA
CAACGCGTTG CCCAGCGGAT CATCGACGAT CCCGAAGGGG TGGCCAACTC TTCCATCACC
CAGCTCGCTC GGGACTGCGA CACCTCGGAA GCCACCGTCA TCCGGTTCTG CCGCACCATC
GACTTCGCCG GCTACCGGGA ACTGCGGCTC CGCCTGGCAT CCGAGGCAGG CCAGGCCCGG
GGGGCGCGCG GCAGCGTCCA AGAGCTCACC GGCGACATCA ACCCGGACGA CACGCTCGTC
ACCGTGGTCC AGAAAATCGC CTACGCTGAT GCGCGCGCCG TAGAAGACAC CGGCTCCCAA
CTCGACATAG AAACCCTGCA GCGCGTTATC GAGCTCCTCG ACGGAGCCCG CCGTATCGAC
ATCTACGGTG TCGGCGCCAG CGCCTTCGTC GCTTCTGACT TCCAGCAGAA GCTGCACCGG
ATCGGCATGA TCTCCCACGC CTGGACCGAC GCCCACGCCA TGCTGACCAG TGCCGCGGTG
CTGCGCCCCG GGGATGTGGC CGTCGGCATC TCCCACAGCG GCTCCACCAG CGACACCGTC
GGGGCACTCG CAGAAGCCCG CCGCAAAGGC GCCTCCACCA TCGCCATCAC GAACTTCCCG
CGCTCACCCA TCAGCGAGGT CAGCGACCAC ATCCTCACCA CCGCAGCCCG CGAGACCACG
TTCCGCTCCG GAGCGACTGC CAGCCGTCTC GCCCAGTTGA CGGTGATCGA CTGCGTGTTC
GTCGGCCTTG CCCAACTGCG CTACGCCGAC ACCCGGGAAG CGCTGGAAGC CACCTACGAG
GCGGTGCGTG GCCTCCGCAT CTCCAGAGAG GAGCGGCGCC GGTCCTAA
|
|---|
| Protein sequence | MNQMAKRSDN DGVLPPKEGG ATPSTVLKIR SLLPSLAPAE QRVAQRIIDD PEGVANSSIT
QLARDCDTSE ATVIRFCRTI DFAGYRELRL RLASEAGQAR GARGSVQELT GDINPDDTLV
TVVQKIAYAD ARAVEDTGSQ LDIETLQRVI ELLDGARRID IYGVGASAFV ASDFQQKLHR
IGMISHAWTD AHAMLTSAAV LRPGDVAVGI SHSGSTSDTV GALAEARRKG ASTIAITNFP
RSPISEVSDH ILTTAARETT FRSGATASRL AQLTVIDCVF VGLAQLRYAD TREALEATYE
AVRGLRISRE ERRRS
|
|---|
| |