| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3209 |
|---|
| Symbol | |
|---|
| ID | 5705540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 3698876 |
|---|
| End bp | 3699838 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641272640 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_001538007 |
|---|
| Protein GI | 159038754 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGATC ACGAGGTGGA CACCACCGCG GAGACCGCGG TGGCCGACGC CGACGGGTTC
GACCGCCGCG GCGCCCGCGC AGGTGCGGCC GACGGTGTGC TGGCTCGGGT CCGGGCCGGT
GCGGACGACC TGACCGGTGC CCTGCGCCGG GTCGCCGAAC ACGTGCTCAG CGACCCGGAG
GCCGCCGCCC GCGCCACCAT CGTCGAGCTG GCCGAGCGAA GCGGCACCTC GCCCGCCACC
ATCACCCGTT TCTGCCGGGC GATGGGCTTC GAAGGGTACG CGGACCTGCG GCTGGGCATC
GCCGCCGAGA CCGGTCGGGC CCGCCTGGCG GGCTGGACCG TCGACATCGG CCGCGAGATC
CAGCCCGGCG ATCCGCTGCG TCGGGTGCTC GACCAGATCA TCGCCGCCGA CACCCGGGCG
ATGCACGACA CCGCCGCCCT ACTCGACCTC GCCGAGGTGG AGCGGGCCGC CGTCGCGATC
GCCGGCGCGA GTCGGGTGAA CATCTTCGGC GCCAGCGGCA GCGCCCTGGT CGGCGAGGAG
ATGCAGTTCA TGCTCCACCG CATCGGAGTC GCCGCCTGGG CGTGGAGCGA CGTACACGAA
GGGCTGGCCT CAGCGGCCCT GTTGCGGGTC GGCGACGTCG CCCTCGGTGT CTCGCACAGT
GGTCAGACTC GGGAGACCAT CGAGATGCTG GCGGAGGCCG GCAGTCGGGG TGCGACCACT
GTCGCGGTGA CCGGCTTCCC CCGCTCACCG CTCGCCGAAC TGGCGGACAT CGCGCTGCTC
ACCGCCAGCC GGGCCACCAC CTTCCGCCCC GACGCGCTGT CCGCCCGGCA CCCCCAGCTG
GTTGTGCTCG ACCTGCTTTA CATCGCCGTC GCACAGCGCA CCCACGACCG GGCCCACGCG
GCCTTGCGGC GTACGGCCCA AGCCGTCGAT GGGCACAAGT CGGCAAAGGG GGCCAACACA
TGA
|
|---|
| Protein sequence | MVDHEVDTTA ETAVADADGF DRRGARAGAA DGVLARVRAG ADDLTGALRR VAEHVLSDPE
AAARATIVEL AERSGTSPAT ITRFCRAMGF EGYADLRLGI AAETGRARLA GWTVDIGREI
QPGDPLRRVL DQIIAADTRA MHDTAALLDL AEVERAAVAI AGASRVNIFG ASGSALVGEE
MQFMLHRIGV AAWAWSDVHE GLASAALLRV GDVALGVSHS GQTRETIEML AEAGSRGATT
VAVTGFPRSP LAELADIALL TASRATTFRP DALSARHPQL VVLDLLYIAV AQRTHDRAHA
ALRRTAQAVD GHKSAKGANT
|
|---|
| |