| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0652 |
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| Symbol | |
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| ID | 4687875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 691329 |
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| End bp | 692174 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639833646 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_980892 |
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| Protein GI | 121603563 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.334737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0629992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACA GAATCAAAGC CTCCCTGTCC TCGCTGGCCC CGGCAGAGCA GCGGGTCGGC
CGGCTGGTGC TGAGCGACCC GCGCGCCTTT GCCAGCCTGC CGATCACCGA GCTGGCGAGC
CGCTCGCATG TCAGCAAGCC GACCGTGGTA CGGTTTTGCC GCAGCGTTGG CTACGACGGG
CTGTCGGATT TCAAGCTCAA GCTGGCCGGC AGCGTGAGCG AAGGCGTGCC CTTCATTCAC
CGCAGCGTCG ATGTGGACGA CAAGACCGGC GACGTGCTGG TCAAGGTGAT CGACAACACG
GTGGCGGCAT TCCTGAAATA CCGCAACGAC GCCAGCCCGC TGGCGATTGA AAAAGCCGTC
GTGGCGCTGC TGGCGGCTTA CCACACCGGC AAGCGCATCG AATTTTTTGG CGTCGGCAAC
TCCGGCATCG TGGCGCAGGA TGCGCAGCAC AAGTTTTTCA GGCTGGGAAT CCAGAGCATT
GCCTACAGCG ACGGCCACAT GCAGGTCATG AGCGCCTCGC TGCTCGGGCC GGGCGACTGC
GTGGTGGTGA TTTCCAACTC AGGCCGCACC CGCGACCTGA TGGATGCCTG CGACATCGCC
CGCAAAAATG GCGCCACCAC CATCGTGGTC ACCGCCACCG CCTCGCCGCT GGCGATGGCC
GGCCACATTC ACCTGGCGGC CGACCATCCG GAAGGCTATG ACCGCTACAG CCCGATGGTG
TCGCGCCTGC TGCACCTGAT GATCATCGAC ATTCTCGCCA CCTGCGTGGC GCTGCGCATC
GGACCCAAGC TGCAGCCGCT GCTCAAGGAA ATGAAGAACA ACCTGCGCAA CAAGCGCTAC
ACCTGA
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| Protein sequence | MLDRIKASLS SLAPAEQRVG RLVLSDPRAF ASLPITELAS RSHVSKPTVV RFCRSVGYDG
LSDFKLKLAG SVSEGVPFIH RSVDVDDKTG DVLVKVIDNT VAAFLKYRND ASPLAIEKAV
VALLAAYHTG KRIEFFGVGN SGIVAQDAQH KFFRLGIQSI AYSDGHMQVM SASLLGPGDC
VVVISNSGRT RDLMDACDIA RKNGATTIVV TATASPLAMA GHIHLAADHP EGYDRYSPMV
SRLLHLMIID ILATCVALRI GPKLQPLLKE MKNNLRNKRY T
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