Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1468 |
Symbol | |
ID | 7976914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 1542754 |
End bp | 1543614 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644798372 |
Product | transcriptional regulator, RpiR family |
Protein accession | YP_002949545 |
Protein GI | 239826921 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000610661 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAGC AGTTAAGCAT TTTAGCGAAA ATCGAAAATC AAATGGAACG GTTTTCACCA GCGGAAAAAA AGATTGCTAC GTATATTATG GAACATGCGG AGCTTGTGCC AAATATGACG ACGAAGGAAC TGTCGAAAAA CGCAGGATCT AGTGAGGCGA GTGTCGTTCG CTTTTGCAAA ACGATCGGCA TTGGCAGCTT TACCGCGTTA AAATTGGCGC TTGTCCGTGA ATTGACGATT GCCGATATGA ACATTAACGA TTTTTCGATT ATTGAAAAAC AAGATGCTCC GTATGATTTA TTTAATAAAG TGACCTATGT CAACAAAGCG GCGATCGAAG CGACAACAAC GACGATTGAT AAACGGGAAT TGGAAAAAGC AGCGGAAGTG ATTGCCAATG CGAAAAAAAT TTTATTTTAC GGAGTCGGAG GATCAGCTTC TTCGGCGATG GATGCATGCT ATAAATTTAC AAAGCTAGGC TATGTGTCGA TGATGTCTCC TGATTTTCAT ACGATGCTTC CGCTTGCGGC AAACTTAGAG AAACATGATG TATTTGTCGC GGTTTCCACA TCGGGAAGAA CAAAGGATGT GTTGGAAATT GCCCGGTTTG CGAAAAAACA AGGCGCCACG GTGATTGCAA TTACAAAACT CGATCCATCT TCGCCATTGT ATAAGGAAGC AGATATCAAA CTATGTCTTC CAGATGTCGA GCAAGATCAT CGGATCGGAA GTATGGCATC GCGAATGACG CAGCTAAATA TCATTGATGC GCTTTATTTA ATTACGTTCC ATCAAGTGGG AAGCCGTGTG CTGGAAAAAT TTCATGAAAC GAGAGAAGAA GTAGTTCGGT TGCGGAGATA A
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Protein sequence | MMKQLSILAK IENQMERFSP AEKKIATYIM EHAELVPNMT TKELSKNAGS SEASVVRFCK TIGIGSFTAL KLALVRELTI ADMNINDFSI IEKQDAPYDL FNKVTYVNKA AIEATTTTID KRELEKAAEV IANAKKILFY GVGGSASSAM DACYKFTKLG YVSMMSPDFH TMLPLAANLE KHDVFVAVST SGRTKDVLEI ARFAKKQGAT VIAITKLDPS SPLYKEADIK LCLPDVEQDH RIGSMASRMT QLNIIDALYL ITFHQVGSRV LEKFHETREE VVRLRR
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