| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2360 |
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| Symbol | rpiR |
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| ID | 4624607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 2871640 |
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| End bp | 2872500 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639797498 |
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| Product | DNA-binding transcriptional regulator HexR |
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| Protein accession | YP_943696 |
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| Protein GI | 119946016 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00190607 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACTT TAGAGTTAAT TCAAAAAAAT CTGGGTAGTT TCAGCAAATC AGAAAGAAAA
GTGGCAGAAG TTATCATTGC ATCACCAGAA GTCGCTATCC ATTCCAGCAT TGCGACACTC
GCTAAAATGG CTGAAGTCAG TGAACCAACG GTTAATCGTT TTTGCAGACG CCTTGATACT
AAGGGTTTTC CTGACTTTAA ATTACTGCTC GCGCAAAGTC TGGTGGTAGG TACCCCCTAT
GTGAATCGTC ATGTTAATCA GGATGATGGC CCGGAAGCTT ATAATGCAAA AATATTTGAA
TCAACCATAG CTTGTCTGGA TTCTGCTAAA AATATGATCG ACACGGCCGT CATTAAAAGA
GCCGTTGAGG TGTTAACCCG AGCCGATAAA ATTGCATTCT TTGGATTGGG TGCATCCTCT
GCCGTTGCCC ATGATGCTTT AAATAAATTT ATCCGTTTTA ATATTCCCGT TTCCTGTTTT
GATGACATTG TTATGCAAAA AATGAGCTGT ATTAATAGTC GTAAAGGGGA TGTGATTGTT
TTAATATCCC ATACGGGCCG TACTAAAGCA CTCGTAGAAG TCGCGCAACT TGCGCGTGAA
AATAATGCTT TTGTTATCGC ATTAACACCG AATCATTCAC CACTTGCTGA AAAAAGTAAC
TTGGTTCTCT CGGCCTCGGT ACCAGAAGAT ACTGATATTT ATATGCCCAT GGCATCCCGT
ATTGTTCAAA TGGTCATTAT TGATGTTTTA GCAACGGGTT TTACATTACG CCGAGGTCCT
AAATTTATTG AACATTTAAA GCGCATCAAA ACCGAGATTA AAGACTCTCG CTTTGATAAA
GTTGATCTAA ACGAAGACTG A
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| Protein sequence | MKTLELIQKN LGSFSKSERK VAEVIIASPE VAIHSSIATL AKMAEVSEPT VNRFCRRLDT
KGFPDFKLLL AQSLVVGTPY VNRHVNQDDG PEAYNAKIFE STIACLDSAK NMIDTAVIKR
AVEVLTRADK IAFFGLGASS AVAHDALNKF IRFNIPVSCF DDIVMQKMSC INSRKGDVIV
LISHTGRTKA LVEVAQLARE NNAFVIALTP NHSPLAEKSN LVLSASVPED TDIYMPMASR
IVQMVIIDVL ATGFTLRRGP KFIEHLKRIK TEIKDSRFDK VDLNED
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