Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0269 |
Symbol | |
ID | 8324426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 291358 |
End bp | 292272 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644940813 |
Product | transcriptional regulator, RpiR family |
Protein accession | YP_003098084 |
Protein GI | 256374424 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.409833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCACCG AGAACACCGA CGCCAGTCCA CTCGTGAAGA TCCGCTCCCT GCTCCCCGGC CTCGCCAGGG CGGAGCAGCG GGTGGCCAAG GTCGTGCTGG ACAACCCGGC GACCGTGGCG CACCGCAGCA TCACCGAGGT GGCCGAGTCC GCGGGCACCA GCGAGACCAC CGTGACGCGG TTCTGCAAGG CGATCGGCGT CGGCGGCTAC CCGGAGCTGC GGATCGCGCT GGCCGCCGAC ACCGCGCGCA CCGCCGCCCG CACCGACCGG GACCTCGGCG GCGACATCGG CCCCGGCGAC GACCTGCGGC AGGTGGTCGG CAAGGTCGCG TTCGCCGACG CCCGCGCCGT GGAGGAGACC GCCGAGCAGC TGAACGTGGA CACCCTGCAG GCCGTGGTGG ACGCGGTGGC GCGGGCGGGC CGGGTCGACG TCTACGGCTT CGGCGCCAGC GCGTTCGTCG CCTTCGACCT CCAGCAGAAG CTGCACCGCA TCGGCCGCAC CTGCTTCGCC TGGAACGACA CGCACATCGC GCTCACCTCG GCCGCCGTGC TGACCGGCGC GGACGTGGCC GTGGGCATCT CGCACACCGG CTCCACCACC GAGACGGTCG AGGCGCTGCG GGTGGCGCGC GAGCGCGGCG CGACCACGGT GGCGCTGACG AACTTCCCGC GCTCCCCCAT CAGCGAGGTC GCCGACCACG TGCTGACCAC GGCGGCCCGC GAGACCACGT TCCGCTCGGG CGCGATGGCC AGCCGCATCG CCCAGCTGAC CGTGGTCGAC TGCCTGTTCA TCGGGGTCGC GCAGCACCAC GTGGAGAGCG CGACGAGCGC GCTGGAGGCG ACCTACGACG CGGTCGCGGG ACACCGGCTG GGCGCCCGCC CGGACGGCAG GCGGCGGCGG GAGGCCGGGA GATGA
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Protein sequence | MSTENTDASP LVKIRSLLPG LARAEQRVAK VVLDNPATVA HRSITEVAES AGTSETTVTR FCKAIGVGGY PELRIALAAD TARTAARTDR DLGGDIGPGD DLRQVVGKVA FADARAVEET AEQLNVDTLQ AVVDAVARAG RVDVYGFGAS AFVAFDLQQK LHRIGRTCFA WNDTHIALTS AAVLTGADVA VGISHTGSTT ETVEALRVAR ERGATTVALT NFPRSPISEV ADHVLTTAAR ETTFRSGAMA SRIAQLTVVD CLFIGVAQHH VESATSALEA TYDAVAGHRL GARPDGRRRR EAGR
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