Gene Amir_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0269 
Symbol 
ID8324426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp291358 
End bp292272 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content74% 
IMG OID644940813 
Producttranscriptional regulator, RpiR family 
Protein accessionYP_003098084 
Protein GI256374424 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.409833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCACCG AGAACACCGA CGCCAGTCCA CTCGTGAAGA TCCGCTCCCT GCTCCCCGGC 
CTCGCCAGGG CGGAGCAGCG GGTGGCCAAG GTCGTGCTGG ACAACCCGGC GACCGTGGCG
CACCGCAGCA TCACCGAGGT GGCCGAGTCC GCGGGCACCA GCGAGACCAC CGTGACGCGG
TTCTGCAAGG CGATCGGCGT CGGCGGCTAC CCGGAGCTGC GGATCGCGCT GGCCGCCGAC
ACCGCGCGCA CCGCCGCCCG CACCGACCGG GACCTCGGCG GCGACATCGG CCCCGGCGAC
GACCTGCGGC AGGTGGTCGG CAAGGTCGCG TTCGCCGACG CCCGCGCCGT GGAGGAGACC
GCCGAGCAGC TGAACGTGGA CACCCTGCAG GCCGTGGTGG ACGCGGTGGC GCGGGCGGGC
CGGGTCGACG TCTACGGCTT CGGCGCCAGC GCGTTCGTCG CCTTCGACCT CCAGCAGAAG
CTGCACCGCA TCGGCCGCAC CTGCTTCGCC TGGAACGACA CGCACATCGC GCTCACCTCG
GCCGCCGTGC TGACCGGCGC GGACGTGGCC GTGGGCATCT CGCACACCGG CTCCACCACC
GAGACGGTCG AGGCGCTGCG GGTGGCGCGC GAGCGCGGCG CGACCACGGT GGCGCTGACG
AACTTCCCGC GCTCCCCCAT CAGCGAGGTC GCCGACCACG TGCTGACCAC GGCGGCCCGC
GAGACCACGT TCCGCTCGGG CGCGATGGCC AGCCGCATCG CCCAGCTGAC CGTGGTCGAC
TGCCTGTTCA TCGGGGTCGC GCAGCACCAC GTGGAGAGCG CGACGAGCGC GCTGGAGGCG
ACCTACGACG CGGTCGCGGG ACACCGGCTG GGCGCCCGCC CGGACGGCAG GCGGCGGCGG
GAGGCCGGGA GATGA
 
Protein sequence
MSTENTDASP LVKIRSLLPG LARAEQRVAK VVLDNPATVA HRSITEVAES AGTSETTVTR 
FCKAIGVGGY PELRIALAAD TARTAARTDR DLGGDIGPGD DLRQVVGKVA FADARAVEET
AEQLNVDTLQ AVVDAVARAG RVDVYGFGAS AFVAFDLQQK LHRIGRTCFA WNDTHIALTS
AAVLTGADVA VGISHTGSTT ETVEALRVAR ERGATTVALT NFPRSPISEV ADHVLTTAAR
ETTFRSGAMA SRIAQLTVVD CLFIGVAQHH VESATSALEA TYDAVAGHRL GARPDGRRRR
EAGR