More than 300 homologs were found in PanDaTox collection
for query gene Caci_6705 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_6705  two component transcriptional regulator, LuxR family  100 
 
 
258 aa  504  9.999999999999999e-143  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.318103  normal  0.0731204 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  48.24 
 
 
224 aa  220  9.999999999999999e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  50.6 
 
 
225 aa  219  3.9999999999999997e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  49.8 
 
 
229 aa  218  6e-56  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  48.58 
 
 
218 aa  216  2.9999999999999998e-55  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  48.41 
 
 
225 aa  214  9e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  51.39 
 
 
221 aa  214  1.9999999999999998e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  47.43 
 
 
250 aa  209  2e-53  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  47.83 
 
 
215 aa  209  5e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  47.47 
 
 
226 aa  208  7e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  47.98 
 
 
225 aa  207  1e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  50.2 
 
 
227 aa  206  3e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  50.2 
 
 
226 aa  206  4e-52  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  48.79 
 
 
218 aa  206  4e-52  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  47.86 
 
 
224 aa  205  5e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  48.02 
 
 
226 aa  205  7e-52  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  47.18 
 
 
234 aa  204  8e-52  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  47.39 
 
 
218 aa  204  1e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  48.64 
 
 
232 aa  204  1e-51  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  46.27 
 
 
221 aa  203  2e-51  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  46.43 
 
 
225 aa  202  3e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  47.58 
 
 
219 aa  203  3e-51  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  49.39 
 
 
217 aa  202  4e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  48.22 
 
 
222 aa  202  5e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  47.24 
 
 
228 aa  201  8e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  45.85 
 
 
221 aa  201  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  47.18 
 
 
219 aa  201  9.999999999999999e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  47.18 
 
 
220 aa  201  9.999999999999999e-51  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.16 
 
 
222 aa  201  9.999999999999999e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.22 
 
 
261 aa  201  9.999999999999999e-51  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  46.88 
 
 
220 aa  201  9.999999999999999e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  48.41 
 
 
215 aa  199  1.9999999999999998e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.24 
 
 
225 aa  200  1.9999999999999998e-50  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  47.04 
 
 
227 aa  200  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  46.56 
 
 
234 aa  200  1.9999999999999998e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  45.85 
 
 
216 aa  199  3e-50  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  49.6 
 
 
225 aa  199  3e-50  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  45.16 
 
 
223 aa  199  3e-50  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  48.83 
 
 
222 aa  199  3e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  48.22 
 
 
234 aa  199  5e-50  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  47.62 
 
 
244 aa  198  6e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  45.1 
 
 
221 aa  197  1.0000000000000001e-49  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  46.61 
 
 
214 aa  197  1.0000000000000001e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  46.15 
 
 
219 aa  196  2.0000000000000003e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  44.53 
 
 
230 aa  196  3e-49  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  47.79 
 
 
224 aa  196  4.0000000000000005e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  47.18 
 
 
220 aa  196  4.0000000000000005e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  46.59 
 
 
247 aa  196  4.0000000000000005e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  47.43 
 
 
224 aa  195  5.000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.19 
 
 
226 aa  195  5.000000000000001e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  47.45 
 
 
226 aa  195  6e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  47.04 
 
 
221 aa  195  6e-49  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  47.81 
 
 
218 aa  195  7e-49  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  44.27 
 
 
239 aa  194  8.000000000000001e-49  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  44.4 
 
 
239 aa  194  8.000000000000001e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  45.85 
 
 
225 aa  194  1e-48  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  46.59 
 
 
224 aa  194  1e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  45.42 
 
 
223 aa  194  1e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  46.8 
 
 
215 aa  194  1e-48  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  43.82 
 
 
220 aa  194  1e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  46.61 
 
 
228 aa  194  1e-48  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  46.59 
 
 
222 aa  193  2e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  46.77 
 
 
223 aa  193  2e-48  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  45.85 
 
 
226 aa  194  2e-48  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  48.02 
 
 
302 aa  193  2e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  47.62 
 
 
241 aa  193  3e-48  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  46.67 
 
 
226 aa  193  3e-48  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  45.56 
 
 
221 aa  192  4e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  46.4 
 
 
223 aa  192  5e-48  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.03 
 
 
230 aa  192  5e-48  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  47.47 
 
 
249 aa  192  6e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  49.19 
 
 
224 aa  191  7e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  44.94 
 
 
230 aa  191  8e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  44.05 
 
 
233 aa  191  9e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  47.01 
 
 
217 aa  191  1e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  45.56 
 
 
217 aa  191  1e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  45.16 
 
 
219 aa  191  1e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  43.63 
 
 
228 aa  191  1e-47  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  45.34 
 
 
224 aa  191  1e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  47.06 
 
 
224 aa  190  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  44.44 
 
 
230 aa  190  2e-47  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  48.19 
 
 
217 aa  190  2e-47  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  46.61 
 
 
225 aa  190  2e-47  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  46.27 
 
 
220 aa  189  2.9999999999999997e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  47.22 
 
 
220 aa  189  2.9999999999999997e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  46.03 
 
 
230 aa  189  4e-47  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  43.55 
 
 
228 aa  189  4e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  45.42 
 
 
224 aa  189  4e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  48.82 
 
 
235 aa  189  5e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  46.46 
 
 
234 aa  189  5e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  47.08 
 
 
221 aa  188  8e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  45.42 
 
 
225 aa  187  1e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  43.5 
 
 
244 aa  187  1e-46  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  44.58 
 
 
220 aa  187  1e-46  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  46.37 
 
 
220 aa  187  2e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  43.95 
 
 
241 aa  186  2e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013739  Cwoe_0262  two component transcriptional regulator, LuxR family  44.76 
 
 
225 aa  187  2e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.0721339  normal  0.623073 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  45.49 
 
 
226 aa  187  2e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  47.22 
 
 
225 aa  186  3e-46  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  44.66 
 
 
231 aa  186  4e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
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