More than 300 homologs were found in PanDaTox collection
for query gene VEA_003572 on replicon NC_013456
Organism: Vibrio sp. Ex25



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013456  VEA_003572  hypothetical protein  100 
 
 
374 aa  789    Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02528  hypothetical protein  74.87 
 
 
374 aa  613  9.999999999999999e-175  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A1919  hypothetical protein  36.09 
 
 
384 aa  253  4.0000000000000004e-66  Vibrio cholerae O395  Bacteria  normal  0.731705  n/a   
 
 
-
 
NC_008700  Sama_3396  response regulator receiver protein  29.83 
 
 
376 aa  174  1.9999999999999998e-42  Shewanella amazonensis SB2B  Bacteria  normal  0.759703  normal 
 
 
-
 
NC_007614  Nmul_A1663  metal dependent phosphohydrolase  29.17 
 
 
375 aa  168  1e-40  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.860701  n/a   
 
 
-
 
NC_010506  Swoo_3428  metal dependent phosphohydrolase  30.03 
 
 
371 aa  162  1e-38  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2713  metal dependent phosphohydrolase  30.43 
 
 
370 aa  156  6e-37  Shewanella loihica PV-4  Bacteria  normal  0.409072  decreased coverage  0.0000724221 
 
 
-
 
NC_008789  Hhal_1355  metal dependent phosphohydrolase  27.25 
 
 
391 aa  154  2e-36  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0230  metal dependent phosphohydrolase  24.79 
 
 
383 aa  135  8e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000415135 
 
 
-
 
NC_007643  Rru_A3180  metal dependent phosphohydrolase  26.85 
 
 
394 aa  133  3.9999999999999996e-30  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1007  GAF domain/HD domain-containing protein  27.52 
 
 
550 aa  94  3e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0907  metal dependent phosphohydrolase  25.25 
 
 
548 aa  86.7  6e-16  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0978  metal dependent phosphohydrolase  27.96 
 
 
558 aa  84  0.000000000000004  Thermotoga petrophila RKU-1  Bacteria  unclonable  0.00000000628602  n/a   
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  27.54 
 
 
352 aa  82.8  0.00000000000001  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3391  putative PAS/PAC sensor protein  25.1 
 
 
1301 aa  82.4  0.00000000000001  Rhodoferax ferrireducens T118  Bacteria  normal  0.0258089  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  30 
 
 
331 aa  82.4  0.00000000000001  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  30 
 
 
331 aa  82.4  0.00000000000001  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_1152  metal dependent phosphohydrolase  27.42 
 
 
565 aa  81.6  0.00000000000002  Thermotoga sp. RQ2  Bacteria  decreased coverage  0.000790776  n/a   
 
 
-
 
NC_009831  Ssed_3915  response regulator receiver modulated metal dependent phosphohydrolase  28.22 
 
 
356 aa  81.6  0.00000000000002  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_4565  diguanylate cyclase and metal dependent phosphohydrolase  29.55 
 
 
833 aa  81.6  0.00000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0183003  n/a   
 
 
-
 
NC_011071  Smal_1200  metal dependent phosphohydrolase  33.83 
 
 
203 aa  81.6  0.00000000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.65438  normal  0.101307 
 
 
-
 
NC_007517  Gmet_0018  metal dependent phosphohydrolase  27.17 
 
 
481 aa  80.9  0.00000000000004  Geobacter metallireducens GS-15  Bacteria  normal  0.161625  normal 
 
 
-
 
NC_009718  Fnod_1236  metal dependent phosphohydrolase  27.88 
 
 
574 aa  80.1  0.00000000000005  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0497288  n/a   
 
 
-
 
NC_007517  Gmet_2559  metal dependent phosphohydrolase  23.29 
 
 
553 aa  79.3  0.0000000000001  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000107172 
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  29.32 
 
 
338 aa  79.3  0.0000000000001  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_1811  GGDEF/HD domain-containing protein  28.26 
 
 
563 aa  79  0.0000000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.63619  n/a   
 
 
-
 
NC_008346  Swol_2130  response regulator receiver protein  29.35 
 
 
334 aa  79.3  0.0000000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.242798  n/a   
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  28.42 
 
 
331 aa  79  0.0000000000001  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA2070  sensory box protein  23.3 
 
 
771 aa  78.6  0.0000000000002  Methylococcus capsulatus str. Bath  Bacteria  normal  0.794479  n/a   
 
 
-
 
NC_012034  Athe_0798  metal dependent phosphohydrolase  31.37 
 
 
545 aa  78.6  0.0000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2655  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  29.87 
 
 
353 aa  78.6  0.0000000000002  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_1530  GGDEF/HD domain-containing protein  28.26 
 
 
564 aa  78.6  0.0000000000002  Clostridium perfringens SM101  Bacteria  normal  0.890216  n/a   
 
 
-
 
NC_011661  Dtur_0065  metal dependent phosphohydrolase  26.07 
 
 
452 aa  78.2  0.0000000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.041414  n/a   
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  30.52 
 
 
331 aa  78.6  0.0000000000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  28.74 
 
 
363 aa  77.8  0.0000000000003  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3292  response regulator receiver modulated metal dependent phosphohydrolase  31.17 
 
 
502 aa  77.4  0.0000000000003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.652795 
 
 
-
 
NC_013216  Dtox_3082  diguanylate cyclase and metal dependent phosphohydrolase  29.28 
 
 
550 aa  77.4  0.0000000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.000925788 
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  30.38 
 
 
331 aa  77.4  0.0000000000004  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  29.95 
 
 
337 aa  77.4  0.0000000000004  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_009253  Dred_2856  putative PAS/PAC sensor protein  29.03 
 
 
339 aa  77  0.0000000000005  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0220538  n/a   
 
 
-
 
NC_007644  Moth_0689  putative PAS/PAC sensor protein  25.39 
 
 
836 aa  77  0.0000000000005  Moorella thermoacetica ATCC 39073  Bacteria  normal  unclonable  0.0000000235898 
 
 
-
 
NC_010717  PXO_00070  Two-component system response regulator RpfG  28.42 
 
 
353 aa  76.6  0.0000000000007  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0844737  n/a   
 
 
-
 
NC_009253  Dred_0910  metal dependent phosphohydrolase  31.58 
 
 
561 aa  76.3  0.0000000000008  Desulfotomaculum reducens MI-1  Bacteria  normal  0.69967  n/a   
 
 
-
 
NC_011661  Dtur_1688  metal dependent phosphohydrolase  23.42 
 
 
648 aa  76.3  0.0000000000008  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  27.92 
 
 
343 aa  76.3  0.0000000000009  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_013946  Mrub_1437  metal dependent phosphohydrolase  31.01 
 
 
471 aa  75.5  0.000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  0.846254  normal 
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  28.48 
 
 
333 aa  75.5  0.000000000001  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2670  metal dependent phosphohydrolase, HD region  32.68 
 
 
344 aa  75.9  0.000000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_3335  metal dependent phosphohydrolase  28.99 
 
 
611 aa  75.9  0.000000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  27.51 
 
 
347 aa  75.9  0.000000000001  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_013525  Tter_0764  metal dependent phosphohydrolase  28.4 
 
 
438 aa  75.9  0.000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008751  Dvul_0434  putative PAS/PAC sensor protein  34.04 
 
 
458 aa  75.9  0.000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_010577  XfasM23_0399  response regulator receiver modulated metal dependent phosphohydrolase  27.51 
 
 
384 aa  74.7  0.000000000002  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0996  sensory box protein  26.57 
 
 
599 aa  74.7  0.000000000002  Clostridium perfringens SM101  Bacteria  normal  0.133788  n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  28.28 
 
 
338 aa  74.3  0.000000000003  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1148  metal dependent phosphohydrolase  25.32 
 
 
405 aa  74.7  0.000000000003  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_010513  Xfasm12_0458  response regulator receiver protein  27.51 
 
 
384 aa  74.3  0.000000000003  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  28.97 
 
 
338 aa  73.9  0.000000000004  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  28.97 
 
 
338 aa  73.9  0.000000000004  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0417  diguanylate cyclase with PAS/PAC sensor  29.03 
 
 
853 aa  73.9  0.000000000004  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1204  metal dependent phosphohydrolase  25.27 
 
 
553 aa  73.9  0.000000000004  Thermosipho melanesiensis BI429  Bacteria  normal  0.154205  n/a   
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  28.57 
 
 
348 aa  73.9  0.000000000004  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  28.97 
 
 
338 aa  73.9  0.000000000004  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_3894  response regulator receiver modulated metal dependent phosphohydrolase  30.56 
 
 
353 aa  73.6  0.000000000005  Methylobacterium populi BJ001  Bacteria  normal  0.0109719  normal  0.416002 
 
 
-
 
NC_011901  Tgr7_1822  putative metal dependent phosphohydrolase  25.41 
 
 
187 aa  73.6  0.000000000006  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.43649  n/a   
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  31.48 
 
 
367 aa  73.6  0.000000000006  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_009483  Gura_1941  metal dependent phosphohydrolase  28.48 
 
 
357 aa  73.2  0.000000000007  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000817968  n/a   
 
 
-
 
NC_007333  Tfu_0550  metal-dependent phosphohydrolase, HD region  28.57 
 
 
509 aa  73.2  0.000000000008  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  27.18 
 
 
331 aa  72.8  0.000000000008  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0994  metal-dependent phosphohydrolase  25.71 
 
 
393 aa  72.4  0.00000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_1911  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  28.57 
 
 
268 aa  72.8  0.00000000001  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0445959  n/a   
 
 
-
 
NC_010172  Mext_0206  metal-dependent phosphohydrolase  30 
 
 
369 aa  71.6  0.00000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.44114  normal  0.760724 
 
 
-
 
NC_004578  PSPTO_1152  HDIG domain protein  23.57 
 
 
395 aa  71.6  0.00000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  30.49 
 
 
350 aa  71.6  0.00000000002  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_009486  Tpet_0995  metal dependent phosphohydrolase  30.67 
 
 
547 aa  71.6  0.00000000002  Thermotoga petrophila RKU-1  Bacteria  normal  0.656707  n/a   
 
 
-
 
NC_013411  GYMC61_1669  metal dependent phosphohydrolase  27.96 
 
 
499 aa  72  0.00000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010483  TRQ2_0762  response regulator receiver modulated metal dependent phosphohydrolase  28.72 
 
 
368 aa  72  0.00000000002  Thermotoga sp. RQ2  Bacteria  normal  0.218112  n/a   
 
 
-
 
NC_009379  Pnuc_1175  metal dependent phosphohydrolase  24.73 
 
 
389 aa  71.6  0.00000000002  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  28.1 
 
 
348 aa  72  0.00000000002  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3509  metal-dependent phosphohydrolase  30.32 
 
 
351 aa  71.2  0.00000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.305053  normal 
 
 
-
 
NC_011757  Mchl_0150  response regulator receiver modulated metal dependent phosphohydrolase  30 
 
 
369 aa  71.6  0.00000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.245203 
 
 
-
 
NC_011071  Smal_1828  response regulator receiver modulated metal dependent phosphohydrolase  29.05 
 
 
379 aa  71.6  0.00000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.723665 
 
 
-
 
NC_010483  TRQ2_1135  metal dependent phosphohydrolase  30.67 
 
 
547 aa  71.6  0.00000000002  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0079  metal dependent phosphohydrolase  29.11 
 
 
320 aa  71.6  0.00000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1612  putative PAS/PAC sensor protein  27.47 
 
 
305 aa  71.6  0.00000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00244603  n/a   
 
 
-
 
NC_004347  SO_0860  response regulator  27.85 
 
 
339 aa  71.2  0.00000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009486  Tpet_0738  response regulator receiver modulated metal dependent phosphohydrolase  28.19 
 
 
368 aa  70.9  0.00000000003  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_3117  metal dependent phosphohydrolase  25.42 
 
 
868 aa  71.2  0.00000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  0.411683  normal  0.363109 
 
 
-
 
NC_010506  Swoo_3823  response regulator receiver modulated metal dependent phosphohydrolase  27.38 
 
 
354 aa  71.2  0.00000000003  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_0823  diguanylate cyclase with PAS/PAC sensor  30.14 
 
 
755 aa  71.2  0.00000000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_1406  response regulator  30.39 
 
 
351 aa  70.9  0.00000000003  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2545  metal dependent phosphohydrolase  27.43 
 
 
269 aa  71.2  0.00000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1421  putative PAS/PAC sensor protein  29.25 
 
 
535 aa  71.2  0.00000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0232449  n/a   
 
 
-
 
NC_013173  Dbac_0215  response regulator receiver modulated metal dependent phosphohydrolase  26.16 
 
 
536 aa  70.9  0.00000000004  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3705  metal dependent phosphohydrolase  29.68 
 
 
444 aa  70.9  0.00000000004  Thermomonospora curvata DSM 43183  Bacteria  normal  0.265005  n/a   
 
 
-
 
NC_011661  Dtur_1753  diguanylate cyclase and metal dependent phosphohydrolase  28.3 
 
 
1073 aa  70.5  0.00000000005  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  30.32 
 
 
340 aa  70.1  0.00000000005  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  25.63 
 
 
328 aa  70.5  0.00000000005  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  29.68 
 
 
339 aa  70.5  0.00000000005  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1378  response regulator receiver modulated metal dependent phosphohydrolase  26.97 
 
 
506 aa  70.1  0.00000000005  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.0000000458361  n/a   
 
 
-
 
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