| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0823 |
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| Symbol | |
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| ID | 6026404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 870231 |
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| End bp | 872498 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641593633 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001716970 |
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| Protein GI | 169830988 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGACA GGACTGCCGA GCTATCTGTT CTTTATGAAA TTGCATCCTT TGACTTCTCC
GGTTCCCTGG AACAACTGTT TGCGGGACTG GTTGAGAAGT CCAGCCGCAT TTTCGATGTG
CGACGGATAG TCCTCGTTCT GAAGGGAGTC AGCCGCGGGA GCTTCACGTG GGGTTTTTCC
CACCTTTCCC CCATCGTTGC CGAGGATTAC GTGAGAGAAA ACCAGTCTTC TTCGGAAGCA
TTTGTGCGAG AAGTATCCAA AGACAGATGT TCCTGCATTC TCTACCTGGA AAAGAAGGGC
GGCTTTACCG CCAAAGAAGT CAGGCTGCTG CATATCCTGA GCAGCCGCCT CGTCGAAATG
ATTGAACTGC ACCACACGCA AGAAGAGGTG CGCAGGGCCC ACGAGTGCTT CAAGCTGGTA
ATCGAGAACA GCCCGATGGT CGCCGTATTC GGGTTCGATC AGCAAGGCGG GCTCACGCAA
TGGAACCGGG AAGCGGAGAG AATCTTTGGT ATCGTGCGTG AAGATGATGT CCCCAATGCA
GAAACCCTGC TGCAGACAAT CCAGCCGGCT GCCCTGCTTG ACAACGCATT GGCCAACGTA
TGGGAGACAG GTCAACCCAC ACCGCCTCTG GAGCTGCTTC TAAAACAGGG GGACAGGGAA
TGCTGGTTAT TGATGACCTT GATCCCCGTT ACCGGTTTTA ACGGAATTAC CGAAGTTTTT
TGCATGGCCG TGGACATCAC TAACCGCAAG CGTGGAGAAA GGCTTTTGCT TCAAAAAAGC
TTGGAGCTGG AAGCGGTTTT CAAAGCCTTG CCCGATCTGT ACTTTCGGTT CGACTCGGAA
GGCACCCTGC TCGACTGTCA AGCGGGGGTA GAATCGGGTC TTTTCGTGCC CGTCGACCCC
TTCCTGGGGC GAAAAGTACA GGAGGTCTTC CCCCCGGACA TCGGCCGCCA AGCACATACA
GCGATCAAGT GCGTACTCCA GACAAAATCC CCGGTCAGTG TAGAGTATTC ATTATCGTTT
AACGGCCGAC AGCAGTTTTT TGAAGGAAGG TATCTCCCCC TGTTGGATGA CCAGGTAATC
GCCGTGATAC GCAACATAAC TGAACGCAAG CAGGTCGAAG AGCGCCTGCG CCACTTAAGC
ATCCATGACT CCCTTACCGG TCTGTACAAC CGGTCGTATT TTGAAGAGGA AATGCACCGT
ATCGAACGTT CCCGCTATAA GTCGGTAGGG TTGATTCTAT GCGACGTCGA TGGCCTGAAG
CTGGTCAACG ATACGCTCGG TCACGCCTCC GGCGACCGCT TGCTTAGGGC GGTCGCAGAG
GTACTTAAAG GTTGCTTCCG CGGAAACGAC GTATTGTCAA GAATCGGCGG TGATGAGTTT
GCCGTGTTAC TTCCAAACGT GACCGAATCG ATCGTTGAAA AGGCTCGCCG GAAAATTGTT
TCCGCTATAG ACCTTTATAA CGAGTCGCAT TCCGACCTCC CGCTGAGTCT GTCCGTGGGA
TTTGCAGTCA GCAGCACTCC GCCCTTCGAC ATGCGTGACC TGTTCCGGAA AGCGGACAAT
GAAATGTACC GCGAAAAGCT GCACCGTAGC CAAAGCGCCC GCAGCGCCAT CGTTGAAACA
CTGAAGAAGG CGCTTGAGGC GCGGGACTTT ATGACGGAGG GACACTGCGA CCGCCTGCAG
CAACTGGTGA CGATGCTGGC CAAGTCTCTG GGTTTACCAG AGAAAACCCA GACCGATCTG
CGCCTGCTGG CCCAGTTCCA CGATATCGGC AAGGTGGGCA TCCCCGACCG TATCCTTCAT
AAGGAGGGCC CCCTGGATGC GGAGGAGTTC GCAGAAATGC GTCGCCACTG CGAGATCGGC
CACCGCATTG CGGTATCTTC ACCTGACCTT GCCCCTATTG CCGACTGGAT TCTCAAACAC
CACGAGTGGT GGAACGGACA GGGTTACCCT CTCGGCCTCA AAGAGGAAGA GATCCCTCTG
GCCTGCCGGA TCCTGGCCAT TACCGATGCT TACGACACTA TGACTAACGA CCGGCCCTAT
CGCAAGGCCA TGTCCAAGAA AGAAGCAATC GAAGAACTTA TAAGGTGTGC CGGCACCCAG
TTTGACCCCG TACTGGTCAA GAAATTCTTG AGTGTGCTGC GAAAGATCAA CCGAGAAAAG
GCGGGTAGCG TGGCAATCAA ACCACAGAAA CAGGGTTGTC TGCCTCACAC GGGAGCAAGG
TCGGTCGCGC CGAGAGTTGA GAGGAATACT GGAAGAGGAA GGGGTTAA
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| Protein sequence | MTDRTAELSV LYEIASFDFS GSLEQLFAGL VEKSSRIFDV RRIVLVLKGV SRGSFTWGFS
HLSPIVAEDY VRENQSSSEA FVREVSKDRC SCILYLEKKG GFTAKEVRLL HILSSRLVEM
IELHHTQEEV RRAHECFKLV IENSPMVAVF GFDQQGGLTQ WNREAERIFG IVREDDVPNA
ETLLQTIQPA ALLDNALANV WETGQPTPPL ELLLKQGDRE CWLLMTLIPV TGFNGITEVF
CMAVDITNRK RGERLLLQKS LELEAVFKAL PDLYFRFDSE GTLLDCQAGV ESGLFVPVDP
FLGRKVQEVF PPDIGRQAHT AIKCVLQTKS PVSVEYSLSF NGRQQFFEGR YLPLLDDQVI
AVIRNITERK QVEERLRHLS IHDSLTGLYN RSYFEEEMHR IERSRYKSVG LILCDVDGLK
LVNDTLGHAS GDRLLRAVAE VLKGCFRGND VLSRIGGDEF AVLLPNVTES IVEKARRKIV
SAIDLYNESH SDLPLSLSVG FAVSSTPPFD MRDLFRKADN EMYREKLHRS QSARSAIVET
LKKALEARDF MTEGHCDRLQ QLVTMLAKSL GLPEKTQTDL RLLAQFHDIG KVGIPDRILH
KEGPLDAEEF AEMRRHCEIG HRIAVSSPDL APIADWILKH HEWWNGQGYP LGLKEEEIPL
ACRILAITDA YDTMTNDRPY RKAMSKKEAI EELIRCAGTQ FDPVLVKKFL SVLRKINREK
AGSVAIKPQK QGCLPHTGAR SVAPRVERNT GRGRG
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