Gene Dtur_1753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_1753 
Symbol 
ID7082273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp1783620 
End bp1786841 
Gene Length3222 bp 
Protein Length1073 aa 
Translation table11 
GC content32% 
IMG OID643458863 
Productdiguanylate cyclase and metal dependent phosphohydrolase 
Protein accessionYP_002353639 
Protein GI217968133 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1609] Transcriptional regulators
[COG2206] HD-GYP domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAAAA ATATTGGAAT ATTCGTAGAC AATTTAAATG TATATCAATG GAATATTTTA 
AAGGGAATTT TCTCATATGC AGAGAGAAAG GATATAAATC TCTATTGTAT TGTAGGAAAA
ACCTTAAACT CTCCCTTTGA TTATGAAAAA TGCGCCAATA AAATCTATTA TTTGATCTCT
AAAAAAGATA TTGATGGACT GATAATGTTC ACCTCTGCTT TAAGTTCTCA CATCCCTAAT
GAAGAAACCA TAAAATTCTG CAAACTATTC TCTGAAAATA TACCTACTGT AAGTATTGGA
CTTCCCTTAG AAAAGGTTCC AAGCTTTATT GTTGACAATA TTAATGGTTT CAAAGAACTT
TTGATCCATC TCATTGAAGA CCATGGTTAT ACAAAGTTTG CTTTTATAAC TGGGCCCATG
GATAATATTG AAGCCAGAAT AAGATATGAA ACTTTTATGG AGGCTTTGTC TCAATATGAT
ATAAAGGTAC CAGAAGATCA CATATATTAT GGAGATTTTC TACATGAATC AGGGAAAAAG
GCTATAAAAA CCTTTTTTGA TGAGAGAAAG ATAAAACCCG AAGTTATTAT TTCATCCAAT
GATGACATGG CTCTTTCAGC TATTGAAGAA CTCAAAAAAA GAAAATTTCT TATACCAGAA
GATATTAAAA TTACTGGATT TGACGATGTA GAAGAAGCAA GCTTTATAAC TCCACCTCTC
ACTACGGTAA GACAACCCCT TTTTGAGATG GGCGAAAAAG CTATAGAGAC CTTAGTAAAT
ATTATAGAGG GAAGAGAAAT AGAAAATATG GAACCTCTTC CCACTAAATT AATTATAAGG
GAATCTTGCG GATGTAAATA TTCAGCGCTG GACAGAGCAA AGGTGGAGCC TAAAAAAGTA
AACATAAGCC TCTCCTGGGA GAAATTAGAG GACTTAAAAG AGGAATTTGT AAAAGTGGCA
AGTAAAGTCC AGTATGAATT AGAAAAAAAT GAGTTAATAG AACTTTACAA AAGCTTTCTT
ACCAGTTTAA GAGAGAAAAA TCCAGACTAT TTTATCAATT ATCTCCAGAA ACTCCTTAAG
ACAAGGGAAT TAATCACCCC TCAAATAGGA TATTTCCAAG ATTACATTTC CACATTAAGA
AGATTTGTCA TATATTATGT GGATAAAGAT GATTTGGCCT TTGCAGAAAA TCTTTGGCAT
CAAGCAAGGG TCATAATAAG CGATTATGCA GAAAGGTCTC AGGGATATAA AAAAGCTCAA
TTAGAAGAAG ATTTTCAAAA TCTGACAGGT TTTGGAATAA ATCTAATTTC TTCCTTTAAT
AAAGATGCTA TTGTAAATTA TCTAAAAGAT AATTTACCTG ATCTTGGTAT AAAGAGCTTC
TATATTGTAG AGCAGGAAAA TTCTCAGAAT AAAAAGAATT TACTTTTTGG CTATTCAGAA
AATGCAGAAC ATAAAGATAT AAAATTTTCA GACGAATTTA TACCTAAAAG AATTCTCCCT
AAAAGGAGAT TTACATATAT TATAGAACCC CTATATTTCC AAGATACATT TTTTGGATAT
GCTCTTTTTG AACTTGGTAT CCCACATAGA TTTTTTTATG AGATTCTAAG AACCCAAATA
AGTGCAGGAA TCCAGGGAGC AAAATTATTT GAAGAAAGAA GAGCATATGA AGATCAGCTA
ATAGAACATA TCCGAGAGTT ATCAATTCTA AATGAGATTG GAAATACCAT AACCTCCTCC
ATCGAACTAG ATCTAATATG GGATCTTGTC TCAAGCAAAA TAGCAAATCT ATTTGATTAT
GATGCTTTTT ACTTAGCTCT TCTAAATGGA AATGAAAATA TCTTAGATAT AAAAGTGAAA
AAACTTAAAA AGACTCATGA AAAGTTAACT AATGCAGACA AAAACATAAT AATAGAGTCA
ATAAAAAATA ATAACCCTAT GCTTATAAAG AAAGAAAACA AAAACATTTT ATGTGTACCA
TTAATTACAG GAAGAGGAGT AAAAGGTGCC ATAGTCCTTA AACATGAAAA TGATGTATAC
ACCGAGAAGA CAGTAAACTT TTTAAAAGCT ATTGCCAATT ATATTTCTAT AGCTATTGAA
AATGCCTTTC TATTTGAAGA GATAAAGAAA TTAGCAACCA TAGATCCTCT TACAGGAGTT
CTAAATAGGA GAGCTTTAGA GGAAGGGTTT AACAAAGATG TAGAAAGGGC AAAAAGATAC
AATAGACCCC TTTCTGCAAT AGTAATAGAT GTGGACAATT TTAAGTTATT TAATGATACC
TATGGACACA CTTTTGGAGA CCAAGTACTA AGAGAGTTAG CGAAAATTTT AAAAAATTCA
TGTAGAAAAA CGGACTTAGT AGGAAGATAT GGAGGAGATG AATTCGCAAT AATCTTACCA
GAGACCAATT TAGAGGGGGC TATTAAACTT GCAGAAAGAT TATTAAAGAG TATTAGAAAC
TTAACCATTA CAACTCCTAC GAACAACAAA ATCCCTATAA AAATAAGTAT GGGAATAGCA
TCTTATCCTG ATGATACTAA TGAACCAGAG AAACTATTGA CCCTTGCAGA TATAGCCATG
TACAAAGCTA AAACTTCAGG AGGAGATTCT TTTAGTACCA TATCTTGCTC CTACAAAACT
CCCATGTCCA AAGAAGCCCC TAAATTTGAT GAATTTCTTG GTTTAATTAA TGCCATTGAT
AACAAGGACA ATTACACTTA TACTCATTGT AACGAAGTAG CCAAATATGC AAGAAAAATT
GGAGAAAAAT TAGGACTTTC TAAAGAAGAT CTTGAGATAT TAGAGCTTGC AGGAAAACTT
CATGATATTG GAAAAATTGG AATACCCTTC GAAATACTTA AAAAACCAGG ACCTCTAACC
GATGAGGAAT GGAAGATTAT TAAGGAACAT CCAAGATTAG GCTACCTTAT ATTAAACCAA
CTTCCCAAAA TGGAAAAACT CCTTCAGGCA GTACTTTATC ACCATGAGAG ATATGATGGA
AAAGGATATC CCCAAAGCCT TCAGGGAAAG GAAATTCCTC TTCTTGCAAG GATTATCGCA
GTAGCTGATG CCTACTCTGC AATGAAATCC AATAGACCTT ACAGAAAAGG CCTTTCTAAG
AAAGAGATCA TTAATGAAAT AAAGAAAAAT ATGGGCAAAC AATTTGATCC AGAGATTGCC
CAATTATTTT TAGAATTATT AGAAAAAGGA GAAATTGAGT GA
 
Protein sequence
MRKNIGIFVD NLNVYQWNIL KGIFSYAERK DINLYCIVGK TLNSPFDYEK CANKIYYLIS 
KKDIDGLIMF TSALSSHIPN EETIKFCKLF SENIPTVSIG LPLEKVPSFI VDNINGFKEL
LIHLIEDHGY TKFAFITGPM DNIEARIRYE TFMEALSQYD IKVPEDHIYY GDFLHESGKK
AIKTFFDERK IKPEVIISSN DDMALSAIEE LKKRKFLIPE DIKITGFDDV EEASFITPPL
TTVRQPLFEM GEKAIETLVN IIEGREIENM EPLPTKLIIR ESCGCKYSAL DRAKVEPKKV
NISLSWEKLE DLKEEFVKVA SKVQYELEKN ELIELYKSFL TSLREKNPDY FINYLQKLLK
TRELITPQIG YFQDYISTLR RFVIYYVDKD DLAFAENLWH QARVIISDYA ERSQGYKKAQ
LEEDFQNLTG FGINLISSFN KDAIVNYLKD NLPDLGIKSF YIVEQENSQN KKNLLFGYSE
NAEHKDIKFS DEFIPKRILP KRRFTYIIEP LYFQDTFFGY ALFELGIPHR FFYEILRTQI
SAGIQGAKLF EERRAYEDQL IEHIRELSIL NEIGNTITSS IELDLIWDLV SSKIANLFDY
DAFYLALLNG NENILDIKVK KLKKTHEKLT NADKNIIIES IKNNNPMLIK KENKNILCVP
LITGRGVKGA IVLKHENDVY TEKTVNFLKA IANYISIAIE NAFLFEEIKK LATIDPLTGV
LNRRALEEGF NKDVERAKRY NRPLSAIVID VDNFKLFNDT YGHTFGDQVL RELAKILKNS
CRKTDLVGRY GGDEFAIILP ETNLEGAIKL AERLLKSIRN LTITTPTNNK IPIKISMGIA
SYPDDTNEPE KLLTLADIAM YKAKTSGGDS FSTISCSYKT PMSKEAPKFD EFLGLINAID
NKDNYTYTHC NEVAKYARKI GEKLGLSKED LEILELAGKL HDIGKIGIPF EILKKPGPLT
DEEWKIIKEH PRLGYLILNQ LPKMEKLLQA VLYHHERYDG KGYPQSLQGK EIPLLARIIA
VADAYSAMKS NRPYRKGLSK KEIINEIKKN MGKQFDPEIA QLFLELLEKG EIE