| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_1355 |
|---|
| Symbol | |
|---|
| ID | 4710911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 1464499 |
|---|
| End bp | 1465674 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639855822 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001002924 |
|---|
| Protein GI | 121998137 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAAG AGGCACACCT TCCGTCCTTC TGTGGCGATG CCACCGAAAC CGGGGCACTC
GATGTCCTGC CGCTCAGCGA CCAGGAGCCG CACCTACGGC TCAGCGAACG CTTCGAACGA
CTGCGCGCCC ATATCAACCA GGCGCTGCCC CACGGTGCGG TCCACCGCAT CGCCGTGGCC
ATTTACGAGC CGGACGCCGA TCGGCTCAAG ACCTACGGCG CCGGCGGCGA TGCACCCAGC
CCGTTGGATC GTTACGAGAC CAACCTGGCC GATACCCCCA CCCTGCGTGC CCTCGCCGAG
GCACCGGGCG TACGGATCAT CGACGATTAC CAGGACCACC CCAGCCCCCG CCGCCATACC
GCCAGCATCC GCGAGAGCGG TCTACGTTCC GGGATGATCC TGCCGCTGCA CCACGAGCAG
ACCTTCGTCG GCTTCCTGTT CCTCAACTCC CGCCAGCCCG GCTATTTCCA GGGCCCGATC
GTCAAGCAGC TAGCGCCGTA CATCGACCTG GGTCGCCTGC TGGCAATCAC CTCCATCCGC
ACTACGCAGA CCCTCCGGGG TGCGGCACGC ACGGCCATGG CTTTCGGGCG CGCGCGGGAC
GACGAGACCG GGGGACACCT GTCACGAATG GCGGAGTACA GCCGCCTCAT CGCCCTGGAA
CTGGCCCAGA CCCACCCCCT CAGCGACGAA TACATCGAGA TGGTCTACCA GTTCGCGCCG
GTCCACGACG TGGGCAAGAT CGCCGTCCCG GACGGCATCC TCCTTAAGCC GGGGCGACTC
GCCGAGGAGG AGTTCGCGCA GATGCGCGAA CACGTCAGCC GCGGCGTGGC CATGGTGCTG
GCCATGACCG AGGAGCTGGG CCTCAGCGAG GACCGACGCG CGGCCATCAT GCGTAATATC
GTCGCCTACC ACCACGAGCG CCTGGACGGC AGCGGTTACC CGACCGGTGC GCGCGGCGAC
CAGATCCCTC TGGAGGGGCG CATCGTCGCC GTAGCCGACG TCTTCGACGC CCTGACCAGC
GAACGCCCCT ACAAGCGCCC CTGGGGGTTT ACCGAGGCCG CCGACACCCT GCACGCCGAA
GCGGCGGCCG GGAAGCTGTG CGCCGAGTGC GTGGCGGCCT TTCTGCGCCG AAGCGTCGAG
ATCGAAGCGA TCCGCGGCCG TCACGGGGTC CGCTGA
|
|---|
| Protein sequence | MGKEAHLPSF CGDATETGAL DVLPLSDQEP HLRLSERFER LRAHINQALP HGAVHRIAVA
IYEPDADRLK TYGAGGDAPS PLDRYETNLA DTPTLRALAE APGVRIIDDY QDHPSPRRHT
ASIRESGLRS GMILPLHHEQ TFVGFLFLNS RQPGYFQGPI VKQLAPYIDL GRLLAITSIR
TTQTLRGAAR TAMAFGRARD DETGGHLSRM AEYSRLIALE LAQTHPLSDE YIEMVYQFAP
VHDVGKIAVP DGILLKPGRL AEEEFAQMRE HVSRGVAMVL AMTEELGLSE DRRAAIMRNI
VAYHHERLDG SGYPTGARGD QIPLEGRIVA VADVFDALTS ERPYKRPWGF TEAADTLHAE
AAAGKLCAEC VAAFLRRSVE IEAIRGRHGV R
|
|---|
| |