| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2856 |
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| Symbol | |
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| ID | 4958565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 3099559 |
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| End bp | 3100578 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640182037 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001114185 |
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| Protein GI | 134300689 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00277] uncharacterized domain HDIG |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0220538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAGAGA GGTTGTTTTC AGCAGGAATA CCTGAATTAG AGAAGTTTAC CCATAGGATT
ATGGAGTCTT CTGAAGATCT GATTACCGTT ATAGATTGTC AGGGTAACAT CATTGCTATC
AATCCTGCTG TTAGCAGGCT CCTCAATATA AAAGCAAGTG AACTGATTGG TAAATCCATG
ATTGACTCTT TATATGGTGG AAAAAAATTC GACTATCAGG CAAAATATCT GTGCCCCCTT
ATCGAAACCC TGGAAACTGG TCGTGAATAT CACGAAGAAG AAACCACTTT AAAATCCCCC
TTACTGAATA GTCACTTTGT CTGCAAAACT ACCACTGGCA TACTAAGGAA TGCTCAGGGG
AAACCAGCTG CTATATACGC CCTTTATAAA GACCTCACCA TGTGGCGTAG TTTGGAACGA
AGAAATGAAA GTCTCAAAGA AATGATGAAT GCCCAGCAAC TACAGACGAT TCTGGCCTTT
TCTGCTGCCA TTGGGGCCCG TGATAATTAT ACGAGGGGAC ATTCAGAACG GGTTGCGGAA
TATGCCCAAA TGATTGCTAC GGCAATGGGT TTGCAGGAAA TAAGTCAGTT GGTTTATGTT
GCCTCCCTAG TTCATGATGT TGGTAAAATT GGCATTCCTG AACACATATT AAATAAACCT
AGCCGTTTAA CGGAAGAAGA ATATACCAAG ATCAAAGAGC ACACAGTAAC GGGCTCCAAT
ATTCTTAAAC AAATTGATAC CTTTTCCACA CTGGGCGCCA TTGTACGTTA TCATCATGAA
AGATACGATG GTAAGGGGTA CCCCGAGGGG CTGGCTGGAG AAGATATTCC TCTTATATCT
CGAATCATTG CAGTGGCAGA TTCCTTTGAG GCCATGACTT CCGATCGCAG TTATCGAAAG
CGTTTTTCCA TTGAATATGC TTTGGAAGAA TTAAAACGCT GTGCAGGTTC TCAATTTGAC
CCCCTCGTTG TAGAACACTT TATCAAATTG GTTTCAGGAT CTGGGATGGA AAAAGTTTAA
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| Protein sequence | MSERLFSAGI PELEKFTHRI MESSEDLITV IDCQGNIIAI NPAVSRLLNI KASELIGKSM
IDSLYGGKKF DYQAKYLCPL IETLETGREY HEEETTLKSP LLNSHFVCKT TTGILRNAQG
KPAAIYALYK DLTMWRSLER RNESLKEMMN AQQLQTILAF SAAIGARDNY TRGHSERVAE
YAQMIATAMG LQEISQLVYV ASLVHDVGKI GIPEHILNKP SRLTEEEYTK IKEHTVTGSN
ILKQIDTFST LGAIVRYHHE RYDGKGYPEG LAGEDIPLIS RIIAVADSFE AMTSDRSYRK
RFSIEYALEE LKRCAGSQFD PLVVEHFIKL VSGSGMEKV
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