Gene VEA_003572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003572 
Symbol 
ID8557305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2168751 
End bp2169875 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content44% 
IMG OID646406667 
Producthypothetical protein 
Protein accessionYP_003286197 
Protein GI262394343 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCACC GGAGTTTTTA CCCGTTTGCA AAACCGCTTA ATGAGCAACT GCAAACGCTA 
AAGGGCAGGA TGCAGGCGCA CTTGCCGTGT ATTGATAGGG TGTCATTTGC TAAATATCAC
CCAGACCAAG ATGTGCTCAA ATCATTTGCA GAAAGTGAGT TCGACACTTG GTGTTTAGCC
CACCATGAGT CAGCATTCCG TAAACTCCAC CACCTCAATA TTGCCTCCAA AAACGCGATT
CCTCGCATCG TCGAAGACCT TCACGATATT AATCATTGTC CTCGGGTTCA AACCTTACTC
AAACACGGAT ACCAGTCGTC GGTTGCGATT CCTTGTTACG ACAATAAAGC ATTTACTGGC
TTTGTGTTTT TAAATTCTAC TCAGCCCAAT GCGTTTAGCT TAGAAGCGTT GAATAGTCTC
AAACCTTATT TCGAAATGAT TCAATTTGCG GTTGAATCAG AAGACCACGT CGTTAGCGCG
ATAGAAACGT TGGCGAACCG AATGCAATGT ATGATGCCAG GCTACTCCCC TGAGTTTTAC
GCGCATACCA AACGAATGAA GTACTACAGC CAAGTCATCG CAACGCAGTT AGCGGATCGT
TATCACCTGA ATGATGAAAT GGTCGAAGAT ATTGGTATTT TTGCTCAATT CCATGCGCTC
AGTGATATTC AGCTGCCAGT TGAAATTGCT AGTCGCCGAA CAAATTATAC TCAAGAACAA
GAGGCGATAT TGATGCAACA TATTGAGCGT TGCATCGACT CGGCCGATGA CATAGTGGCT
CGTATCGGAA ATCCGGTTCA CCCGAGTGTG ACTTTGTTTT TGCAGATGGT TACGTATCAA
TACGAAAACT TAAATGGTAC TGGTTATCCG TATGGTTTAA CCAGTGACGA TATACCAATC
GCCGCGCAAA TTACGGCTGT CGCGAATGCC TTTGATTTTA TGACGACGCA CCATCCGTAC
AGACAAGCGT GGTCCATCCC ATACGCATTG TTAGAACTTG AAAAATGGGT ATATCAGGGA
TGGTTATCTC GAGAATGTGT TAATGCTCTG CGAGAGCATC AAGGTTATAT AAAGAAAATC
ATCCACAAAT ATCCGGAGCA CTATACAGGC TTGGGGTTAA TGTGA
 
Protein sequence
MAHRSFYPFA KPLNEQLQTL KGRMQAHLPC IDRVSFAKYH PDQDVLKSFA ESEFDTWCLA 
HHESAFRKLH HLNIASKNAI PRIVEDLHDI NHCPRVQTLL KHGYQSSVAI PCYDNKAFTG
FVFLNSTQPN AFSLEALNSL KPYFEMIQFA VESEDHVVSA IETLANRMQC MMPGYSPEFY
AHTKRMKYYS QVIATQLADR YHLNDEMVED IGIFAQFHAL SDIQLPVEIA SRRTNYTQEQ
EAILMQHIER CIDSADDIVA RIGNPVHPSV TLFLQMVTYQ YENLNGTGYP YGLTSDDIPI
AAQITAVANA FDFMTTHHPY RQAWSIPYAL LELEKWVYQG WLSRECVNAL REHQGYIKKI
IHKYPEHYTG LGLM