More than 300 homologs were found in PanDaTox collection
for query gene Sama_3396 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_3396  response regulator receiver protein  100 
 
 
376 aa  774    Shewanella amazonensis SB2B  Bacteria  normal  0.759703  normal 
 
 
-
 
NC_010524  Lcho_0230  metal dependent phosphohydrolase  48.19 
 
 
383 aa  337  2.9999999999999997e-91  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000415135 
 
 
-
 
NC_007614  Nmul_A1663  metal dependent phosphohydrolase  42.82 
 
 
375 aa  311  7.999999999999999e-84  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.860701  n/a   
 
 
-
 
NC_009092  Shew_2713  metal dependent phosphohydrolase  43.14 
 
 
370 aa  293  3e-78  Shewanella loihica PV-4  Bacteria  normal  0.409072  decreased coverage  0.0000724221 
 
 
-
 
NC_010506  Swoo_3428  metal dependent phosphohydrolase  42.46 
 
 
371 aa  279  6e-74  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3180  metal dependent phosphohydrolase  38.71 
 
 
394 aa  253  4.0000000000000004e-66  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1355  metal dependent phosphohydrolase  40.68 
 
 
391 aa  252  7e-66  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1919  hypothetical protein  34.05 
 
 
384 aa  227  3e-58  Vibrio cholerae O395  Bacteria  normal  0.731705  n/a   
 
 
-
 
NC_013456  VEA_003572  hypothetical protein  29.83 
 
 
374 aa  174  1.9999999999999998e-42  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02528  hypothetical protein  29.55 
 
 
374 aa  169  1e-40  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011662  Tmz1t_1183  response regulator receiver modulated metal dependent phosphohydrolase  44.1 
 
 
363 aa  149  6e-35  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2085  response regulator receiver modulated metal dependent phosphohydrolase  47.1 
 
 
345 aa  146  7.0000000000000006e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.931733  normal  0.012958 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  44 
 
 
328 aa  144  3e-33  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2012  response regulator receiver modulated metal dependent phosphohydrolase  36.02 
 
 
531 aa  142  8e-33  Shewanella baltica OS155  Bacteria  normal  0.0999069  n/a   
 
 
-
 
NC_009523  RoseRS_3371  putative PAS/PAC sensor protein  33.12 
 
 
649 aa  141  9.999999999999999e-33  Roseiflexus sp. RS-1  Bacteria  normal  hitchhiker  0.00785192 
 
 
-
 
NC_003910  CPS_4164  response regulator/phosphatase  48.72 
 
 
352 aa  142  9.999999999999999e-33  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2902  response regulator receiver  44.39 
 
 
350 aa  140  3e-32  Dechloromonas aromatica RCB  Bacteria  normal  0.1984  normal  0.246098 
 
 
-
 
NC_009486  Tpet_0738  response regulator receiver modulated metal dependent phosphohydrolase  43.15 
 
 
368 aa  140  3.9999999999999997e-32  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0663  response regulator receiver  45.68 
 
 
340 aa  140  4.999999999999999e-32  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_6015  response regulator receiver modulated metal dependent phosphohydrolase  41.03 
 
 
333 aa  139  7e-32  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  42.05 
 
 
347 aa  139  7.999999999999999e-32  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_011989  Avi_4319  Metal dependent phosphohydrolase with a response regulator receiver protein  42.11 
 
 
382 aa  137  2e-31  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3114  metal dependent phosphohydrolase  35.07 
 
 
523 aa  137  3.0000000000000003e-31  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00390297  n/a   
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  40.2 
 
 
331 aa  137  3.0000000000000003e-31  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  47.65 
 
 
338 aa  137  3.0000000000000003e-31  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  47.65 
 
 
338 aa  137  3.0000000000000003e-31  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0762  response regulator receiver modulated metal dependent phosphohydrolase  41.62 
 
 
368 aa  137  4e-31  Thermotoga sp. RQ2  Bacteria  normal  0.218112  n/a   
 
 
-
 
NC_007298  Daro_3458  response regulator receiver  41.94 
 
 
365 aa  136  5e-31  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5359  response regulator receiver modulated metal dependent phosphohydrolase  46.3 
 
 
347 aa  136  5e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0670454 
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  43.12 
 
 
331 aa  136  5e-31  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0961  metal dependent phosphohydrolase  48.03 
 
 
212 aa  136  6.0000000000000005e-31  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1828  response regulator receiver modulated metal dependent phosphohydrolase  43.23 
 
 
379 aa  135  9e-31  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.723665 
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  41.33 
 
 
363 aa  135  9.999999999999999e-31  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3169  response regulator receiver modulated metal dependent phosphohydrolase  43.5 
 
 
353 aa  135  9.999999999999999e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.821118  normal 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  49.08 
 
 
379 aa  134  1.9999999999999998e-30  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_010506  Swoo_3313  response regulator receiver modulated metal dependent phosphohydrolase  47.8 
 
 
343 aa  134  1.9999999999999998e-30  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.00000482447 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  46.47 
 
 
338 aa  135  1.9999999999999998e-30  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0081  two component transcriptional regulator, AraC family  41.84 
 
 
399 aa  135  1.9999999999999998e-30  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0860  response regulator  46.01 
 
 
339 aa  134  3e-30  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  42.21 
 
 
339 aa  134  3.9999999999999996e-30  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  36.32 
 
 
350 aa  133  3.9999999999999996e-30  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  41.03 
 
 
360 aa  133  5e-30  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2655  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  43.21 
 
 
353 aa  133  5e-30  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  41.67 
 
 
338 aa  133  5e-30  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  40.85 
 
 
331 aa  133  5e-30  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  40.85 
 
 
331 aa  133  5e-30  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2755  response regulator receiver modulated metal dependent phosphohydrolase  39.11 
 
 
520 aa  133  5e-30  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00070  Two-component system response regulator RpfG  43.39 
 
 
353 aa  133  6e-30  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0844737  n/a   
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  45.93 
 
 
340 aa  133  6e-30  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_004347  SO_4003  response regulator  42.35 
 
 
357 aa  132  6.999999999999999e-30  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_3604  putative PAS/PAC sensor protein  31.04 
 
 
619 aa  132  7.999999999999999e-30  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.562878 
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  43.9 
 
 
367 aa  132  9e-30  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_008709  Ping_3001  metal dependent phosphohydrolase  38.69 
 
 
420 aa  132  9e-30  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  42.78 
 
 
338 aa  132  1.0000000000000001e-29  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0148  response regulator receiver modulated metal dependent phosphohydrolase  47.5 
 
 
385 aa  132  1.0000000000000001e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750781  n/a   
 
 
-
 
NC_007520  Tcr_1911  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  42.86 
 
 
268 aa  132  1.0000000000000001e-29  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.0445959  n/a   
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  42.35 
 
 
337 aa  132  1.0000000000000001e-29  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  37.14 
 
 
346 aa  132  1.0000000000000001e-29  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008741  Dvul_3024  response regulator receiver modulated metal dependent phosphohydrolase  41.71 
 
 
363 aa  132  1.0000000000000001e-29  Desulfovibrio vulgaris DP4  Bacteria  normal  0.433593  n/a   
 
 
-
 
NC_009616  Tmel_0497  response regulator receiver modulated metal dependent phosphohydrolase  31.52 
 
 
432 aa  132  1.0000000000000001e-29  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0187  response regulator receiver modulated metal dependent phosphohydrolase  48.41 
 
 
354 aa  131  2.0000000000000002e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0125166 
 
 
-
 
NC_008009  Acid345_3335  metal dependent phosphohydrolase  43.55 
 
 
611 aa  131  2.0000000000000002e-29  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3509  metal-dependent phosphohydrolase  44.44 
 
 
351 aa  130  3e-29  Methylobacterium extorquens PA1  Bacteria  normal  0.305053  normal 
 
 
-
 
NC_010725  Mpop_3894  response regulator receiver modulated metal dependent phosphohydrolase  37.44 
 
 
353 aa  130  3e-29  Methylobacterium populi BJ001  Bacteria  normal  0.0109719  normal  0.416002 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  44.81 
 
 
331 aa  130  3e-29  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  43.23 
 
 
328 aa  130  3e-29  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_014212  Mesil_3117  metal dependent phosphohydrolase  46.15 
 
 
868 aa  130  4.0000000000000003e-29  Meiothermus silvanus DSM 9946  Bacteria  normal  0.411683  normal  0.363109 
 
 
-
 
NC_007404  Tbd_2670  metal dependent phosphohydrolase, HD region  45.81 
 
 
344 aa  130  4.0000000000000003e-29  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2868  response regulator receiver modulated metal dependent phosphohydrolase  37.67 
 
 
513 aa  130  4.0000000000000003e-29  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1491  response regulator receiver modulated metal dependent phosphohydrolase  37.67 
 
 
513 aa  130  4.0000000000000003e-29  Shewanella baltica OS223  Bacteria  normal  0.0411849  normal  0.405552 
 
 
-
 
NC_009665  Shew185_2885  response regulator receiver modulated metal dependent phosphohydrolase  37.67 
 
 
513 aa  130  4.0000000000000003e-29  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3014  response regulator receiver modulated metal dependent phosphohydrolase  37.67 
 
 
513 aa  130  4.0000000000000003e-29  Shewanella baltica OS195  Bacteria  normal  normal  0.152382 
 
 
-
 
NC_010424  Daud_1728  putative PAS/PAC sensor protein  34.69 
 
 
1171 aa  130  5.0000000000000004e-29  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.00367624  n/a   
 
 
-
 
NC_010814  Glov_1546  response regulator receiver modulated metal dependent phosphohydrolase  46.34 
 
 
368 aa  130  5.0000000000000004e-29  Geobacter lovleyi SZ  Bacteria  normal  0.61009  n/a   
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  37.67 
 
 
348 aa  130  5.0000000000000004e-29  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  45 
 
 
338 aa  129  6e-29  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  45 
 
 
338 aa  129  6e-29  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  45 
 
 
338 aa  129  6e-29  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  45 
 
 
338 aa  129  6e-29  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0538  response regulator receiver modulated metal dependent phosphohydrolase  43.79 
 
 
363 aa  129  6e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.973232  normal 
 
 
-
 
NC_011757  Mchl_3816  response regulator receiver modulated metal dependent phosphohydrolase  43.79 
 
 
351 aa  129  7.000000000000001e-29  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0960158  normal 
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  37.21 
 
 
348 aa  129  7.000000000000001e-29  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3786  response regulator receiver modulated metal dependent phosphohydrolase  36.52 
 
 
529 aa  129  8.000000000000001e-29  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1613  response regulator receiver modulated metal dependent phosphohydrolase  43.78 
 
 
487 aa  129  8.000000000000001e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.350204  hitchhiker  0.000130728 
 
 
-
 
NC_007517  Gmet_0018  metal dependent phosphohydrolase  43.56 
 
 
481 aa  129  9.000000000000001e-29  Geobacter metallireducens GS-15  Bacteria  normal  0.161625  normal 
 
 
-
 
NC_009092  Shew_1983  response regulator receiver modulated metal dependent phosphohydrolase  42.11 
 
 
523 aa  128  2.0000000000000002e-28  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00722808  normal 
 
 
-
 
NC_007954  Sden_2546  metal-dependent phosphohydrolase  37.68 
 
 
515 aa  128  2.0000000000000002e-28  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1041  response regulator receiver protein  40.91 
 
 
365 aa  127  2.0000000000000002e-28  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1789  response regulator receiver protein  42.33 
 
 
524 aa  127  2.0000000000000002e-28  Shewanella amazonensis SB2B  Bacteria  normal  0.0101023  normal  0.210198 
 
 
-
 
NC_008751  Dvul_2247  response regulator receiver modulated metal dependent phosphohydrolase  38.36 
 
 
518 aa  128  2.0000000000000002e-28  Desulfovibrio vulgaris DP4  Bacteria  normal  0.77168  normal 
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  44.17 
 
 
339 aa  127  2.0000000000000002e-28  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2545  metal dependent phosphohydrolase  46.05 
 
 
269 aa  127  3e-28  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011757  Mchl_0150  response regulator receiver modulated metal dependent phosphohydrolase  47.65 
 
 
369 aa  127  3e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.245203 
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  41.67 
 
 
331 aa  127  3e-28  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_010172  Mext_0206  metal-dependent phosphohydrolase  47.65 
 
 
369 aa  127  3e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.44114  normal  0.760724 
 
 
-
 
NC_010513  Xfasm12_0458  response regulator receiver protein  40.31 
 
 
384 aa  126  5e-28  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1019  metal dependent phosphohydrolase  35.29 
 
 
635 aa  126  5e-28  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.416767 
 
 
-
 
NC_010577  XfasM23_0399  response regulator receiver modulated metal dependent phosphohydrolase  40.31 
 
 
384 aa  126  6e-28  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0838  response regulator receiver modulated metal dependent phosphohydrolase  41.57 
 
 
378 aa  125  1e-27  Methylobacterium sp. 4-46  Bacteria  normal  0.8404  normal 
 
 
-
 
NC_009831  Ssed_3778  response regulator  36.67 
 
 
629 aa  125  1e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
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