Gene Swoo_3428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3428 
Symbol 
ID6117760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4192585 
End bp4193700 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content43% 
IMG OID641634983 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001761791 
Protein GI170727765 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGTC ACTCTTTAAT TTTAGATAAT GAGCCCTCGG CTTTACGTAA GCTAAAACAT 
ATCCACCTCT CGACTAAGGT CATCTATCCG GCAATAACCC GAATTGCAGT GGCACTTTAT
GACTCTGATA CTGGTATGGT GCGAACCTTT ATCTATAGTG GTGATGACAC CCCACTAAAC
CATTACTACG CACTTTTAAA AGATTGTTAC TCGCTAAACC AGATTGCCGA AACACAGCAA
TCTAGGCTAG AACAAGACTT ATCAGTATTT GAAAACAGTA AACATCTACA TGCACAGAAA
ATATTCGAAG CGGGTTTTCG AAGTAGCTAC AGTCTACCAA TCATCATAGA TGATGGCTTA
GTCGGATTTA TATTCTTCAA TGCAGAACAA ACTCAAGCAT TTGAACCAGC CTGTTTAGAT
CACCTTGAGT TGGTCGGTAA CTTAATTTCA CTGGTGATAT CCAGTGAGCT GGCTAGCATA
AGAACATTGG CATCGACCAT GCGAACCGCC ATTGACGTTA CTCATTTCCG CGATCCAGAA
ACTGGCGAGC ACCTGCAGCG TATGGCCCAT TACTCTCGCT TGATCGTAAG TAAAATTGCC
GACGAATTCG ATCTTGATGA TAACTTCGCA GAGCACCTTT TTCTGTTTGC TCCACTGCAC
GATATCGGCA AGATCACCAT TCCTGATGAG ATCTTACTCA AAAATGGCAA ACTACTGCCA
AAGGAGAGAG CCTTGATGCA GACACACAGC ATTGAGGGCT ATAAACTAGT CGATCGCCTT
TTAGAAAATT ATCACCTCAA TAGTCTAAGT CACACTCATA TGCTGAGAAA TATTGTTCTC
TACCACCATG AAAGCTTAGA TGGAAAGGGT TATCCCGAAG GGCTAGTCGG CGATGAGATC
CCTATCGAAG CCAGAGTCGT TGCTGTTGCA GATATCTTTG ATGCATTAAC CAGTGAGCGC
CCCTATAAAC AGGCATGGAG TAACCAACAA GCAGCAGAGG AGTTAACTAA GCTCGCTGGC
GTGAAACTCG ATGCCAGCTG TGTGAATGCG CTACTTGCTT CAATGGATGA AGTTGAACTC
ATTCAACATA CCTATCGTGA GAGCACTCTG GCTTAA
 
Protein sequence
MLRHSLILDN EPSALRKLKH IHLSTKVIYP AITRIAVALY DSDTGMVRTF IYSGDDTPLN 
HYYALLKDCY SLNQIAETQQ SRLEQDLSVF ENSKHLHAQK IFEAGFRSSY SLPIIIDDGL
VGFIFFNAEQ TQAFEPACLD HLELVGNLIS LVISSELASI RTLASTMRTA IDVTHFRDPE
TGEHLQRMAH YSRLIVSKIA DEFDLDDNFA EHLFLFAPLH DIGKITIPDE ILLKNGKLLP
KERALMQTHS IEGYKLVDRL LENYHLNSLS HTHMLRNIVL YHHESLDGKG YPEGLVGDEI
PIEARVVAVA DIFDALTSER PYKQAWSNQQ AAEELTKLAG VKLDASCVNA LLASMDEVEL
IQHTYRESTL A