Gene Gmet_2559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2559 
Symbol 
ID3738863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2905684 
End bp2907345 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content62% 
IMG OID637779845 
Productmetal dependent phosphohydrolase 
Protein accessionYP_385503 
Protein GI78223756 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.000107172 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCGACA CGTTCAACGC GGTTATCGAG GGAAGTGAGC GTCTGAGCGG TCTCGCCGAC 
GTGGACGAGG TAGTGAAGGA CCTGTCCCGG CTGCTCAAGA GGCTGGTCAA GAGCAGATGG
ATTGCCGTTT ATTTCTTCGA CCGGGAGCGA CGCGATTTCG CACCGGCCAG AAGCTACGGC
CTTCCTGCCC GCTTCGTCCC CATCTTCCGG GATATGCCCC TTGTCCCCGA CAAGATCCCC
CTTCTCAAGG GGCTGCTCCA GAAGAAACAG CATCTGCTCC TGTCCGACCC GAGCGTGTCG
CACCTCATTC CCCAGAAGTT GAGAAAGCTC CTGCGCAACC TGACGCTGCT GGCCGTGCCG
ATGGTGGCCC GCAACCAGGT AATCGGGGCG GTATTCGTGG CCCGGGCCAG GGAACTCCCC
CCCTTTTCCC CCGATGAAGT GGCGGTGATC CGCGACATGA TCTCCCACGC GGCCCTTATC
GTCTCCCACA TCCAACTCTT CGACGAATCC CTCGACATGG CCCTGGATCT GGCGGGGCGA
ATCGACGTGA TCCTTACCCT CGACGAAATC AACAAGGCGA TCTCGTCGTC CCTTTCCAGC
GACAAGGTCC TGGGAACCGC CATGGAGCAT GTGGAGCGGA TAACGGGGTG CGAATTCGTG
GCGATCCTCC AGGTGGAGGG GAGTAAAATG GCGATCATGG CATCCCACGC CGGAGAGCTT
CCGGTCCCCG ACATTCTCCG CGCCGGTTCA CGACTCCCCC GGGGGCGATG CGCCGCGTGG
AATGCCCGTC GCAACGGACG CAGCACGAGC GTCGTCTTCA TGGAGAAAAC CGAGGGGATG
CCCCCCGTGG ATCAGGCACT CTACTCCCTT GGCATCCGGT CGGTTCTGGC CATTCCGCTG
GTGGTCCGGA ATGAGGTAAA GGGGGTACTC CTTCTGGGGG ACACCGAGGC GGGGAAATTC
GCCCGGGGCG AGACCTTCAC CATCGAGAAG ATCGCATCCC AGATGGCGGT GGCTCTGGAA
AACGCCCGGC TCTACGAAGA CATGCGGAGC CTCTTCATCA ACACCGTGGC GAGCCTCGCC
AACGCCATCG ATGCCAAGAG CCCCTGGACC AAGGGGCACT CGGAGCGGGT CATGCACATC
GCGGCCCGCA TCGCGAAGGA AATGGGGTTT TCCGAACAGG AGGTGGAGAA GGTGCGGCTC
GGCGGCCTCC TCCACGACAT CGGCAAGATC GGGGTAATCG AGGCGGTCCT GGAAAAACCG
GCGGTCCTCT CCGACGACGA GTTCCCCCCG CTTCGGGCCC ACCCGGAGAA GGGGGTTGCG
ATTCTCTCTC CCATCGCCCA GTTGAATGAC GTTCTCCCCG CCATCCTCCA CCACCACGAG
CGCTATGATG GCAAAGGCTA TCCCAAGGGG CTCAAGGGTG AGGAAATCCC CCTCTCGGCA
CGGATCGTTT CGGTTGCCGA CTCCTTTGAC GCCATGGTGT CGGAGCGCCC CTACAAGAAA
GGGTATACCA TCGGCGAGGC CATTGCCGAG TTGCGCAGGG AGGCGGGGAG ACAGTTCGAC
CCGAAGGTGG TGGAGTGCTT CTGCCGTTAC CTTGAACGGA CCATGGGGAG GGAACTCTCC
GGAGACTTTC CGGAGGCGTT CAAGAAGGTT GCGGGAGGGT AG
 
Protein sequence
MIDTFNAVIE GSERLSGLAD VDEVVKDLSR LLKRLVKSRW IAVYFFDRER RDFAPARSYG 
LPARFVPIFR DMPLVPDKIP LLKGLLQKKQ HLLLSDPSVS HLIPQKLRKL LRNLTLLAVP
MVARNQVIGA VFVARARELP PFSPDEVAVI RDMISHAALI VSHIQLFDES LDMALDLAGR
IDVILTLDEI NKAISSSLSS DKVLGTAMEH VERITGCEFV AILQVEGSKM AIMASHAGEL
PVPDILRAGS RLPRGRCAAW NARRNGRSTS VVFMEKTEGM PPVDQALYSL GIRSVLAIPL
VVRNEVKGVL LLGDTEAGKF ARGETFTIEK IASQMAVALE NARLYEDMRS LFINTVASLA
NAIDAKSPWT KGHSERVMHI AARIAKEMGF SEQEVEKVRL GGLLHDIGKI GVIEAVLEKP
AVLSDDEFPP LRAHPEKGVA ILSPIAQLND VLPAILHHHE RYDGKGYPKG LKGEEIPLSA
RIVSVADSFD AMVSERPYKK GYTIGEAIAE LRREAGRQFD PKVVECFCRY LERTMGRELS
GDFPEAFKKV AGG