Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2559 |
Symbol | |
ID | 3738863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 2905684 |
End bp | 2907345 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637779845 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_385503 |
Protein GI | 78223756 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2206] HD-GYP domain |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.000107172 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGACA CGTTCAACGC GGTTATCGAG GGAAGTGAGC GTCTGAGCGG TCTCGCCGAC GTGGACGAGG TAGTGAAGGA CCTGTCCCGG CTGCTCAAGA GGCTGGTCAA GAGCAGATGG ATTGCCGTTT ATTTCTTCGA CCGGGAGCGA CGCGATTTCG CACCGGCCAG AAGCTACGGC CTTCCTGCCC GCTTCGTCCC CATCTTCCGG GATATGCCCC TTGTCCCCGA CAAGATCCCC CTTCTCAAGG GGCTGCTCCA GAAGAAACAG CATCTGCTCC TGTCCGACCC GAGCGTGTCG CACCTCATTC CCCAGAAGTT GAGAAAGCTC CTGCGCAACC TGACGCTGCT GGCCGTGCCG ATGGTGGCCC GCAACCAGGT AATCGGGGCG GTATTCGTGG CCCGGGCCAG GGAACTCCCC CCCTTTTCCC CCGATGAAGT GGCGGTGATC CGCGACATGA TCTCCCACGC GGCCCTTATC GTCTCCCACA TCCAACTCTT CGACGAATCC CTCGACATGG CCCTGGATCT GGCGGGGCGA ATCGACGTGA TCCTTACCCT CGACGAAATC AACAAGGCGA TCTCGTCGTC CCTTTCCAGC GACAAGGTCC TGGGAACCGC CATGGAGCAT GTGGAGCGGA TAACGGGGTG CGAATTCGTG GCGATCCTCC AGGTGGAGGG GAGTAAAATG GCGATCATGG CATCCCACGC CGGAGAGCTT CCGGTCCCCG ACATTCTCCG CGCCGGTTCA CGACTCCCCC GGGGGCGATG CGCCGCGTGG AATGCCCGTC GCAACGGACG CAGCACGAGC GTCGTCTTCA TGGAGAAAAC CGAGGGGATG CCCCCCGTGG ATCAGGCACT CTACTCCCTT GGCATCCGGT CGGTTCTGGC CATTCCGCTG GTGGTCCGGA ATGAGGTAAA GGGGGTACTC CTTCTGGGGG ACACCGAGGC GGGGAAATTC GCCCGGGGCG AGACCTTCAC CATCGAGAAG ATCGCATCCC AGATGGCGGT GGCTCTGGAA AACGCCCGGC TCTACGAAGA CATGCGGAGC CTCTTCATCA ACACCGTGGC GAGCCTCGCC AACGCCATCG ATGCCAAGAG CCCCTGGACC AAGGGGCACT CGGAGCGGGT CATGCACATC GCGGCCCGCA TCGCGAAGGA AATGGGGTTT TCCGAACAGG AGGTGGAGAA GGTGCGGCTC GGCGGCCTCC TCCACGACAT CGGCAAGATC GGGGTAATCG AGGCGGTCCT GGAAAAACCG GCGGTCCTCT CCGACGACGA GTTCCCCCCG CTTCGGGCCC ACCCGGAGAA GGGGGTTGCG ATTCTCTCTC CCATCGCCCA GTTGAATGAC GTTCTCCCCG CCATCCTCCA CCACCACGAG CGCTATGATG GCAAAGGCTA TCCCAAGGGG CTCAAGGGTG AGGAAATCCC CCTCTCGGCA CGGATCGTTT CGGTTGCCGA CTCCTTTGAC GCCATGGTGT CGGAGCGCCC CTACAAGAAA GGGTATACCA TCGGCGAGGC CATTGCCGAG TTGCGCAGGG AGGCGGGGAG ACAGTTCGAC CCGAAGGTGG TGGAGTGCTT CTGCCGTTAC CTTGAACGGA CCATGGGGAG GGAACTCTCC GGAGACTTTC CGGAGGCGTT CAAGAAGGTT GCGGGAGGGT AG
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Protein sequence | MIDTFNAVIE GSERLSGLAD VDEVVKDLSR LLKRLVKSRW IAVYFFDRER RDFAPARSYG LPARFVPIFR DMPLVPDKIP LLKGLLQKKQ HLLLSDPSVS HLIPQKLRKL LRNLTLLAVP MVARNQVIGA VFVARARELP PFSPDEVAVI RDMISHAALI VSHIQLFDES LDMALDLAGR IDVILTLDEI NKAISSSLSS DKVLGTAMEH VERITGCEFV AILQVEGSKM AIMASHAGEL PVPDILRAGS RLPRGRCAAW NARRNGRSTS VVFMEKTEGM PPVDQALYSL GIRSVLAIPL VVRNEVKGVL LLGDTEAGKF ARGETFTIEK IASQMAVALE NARLYEDMRS LFINTVASLA NAIDAKSPWT KGHSERVMHI AARIAKEMGF SEQEVEKVRL GGLLHDIGKI GVIEAVLEKP AVLSDDEFPP LRAHPEKGVA ILSPIAQLND VLPAILHHHE RYDGKGYPKG LKGEEIPLSA RIVSVADSFD AMVSERPYKK GYTIGEAIAE LRREAGRQFD PKVVECFCRY LERTMGRELS GDFPEAFKKV AGG
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