| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0910 |
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| Symbol | |
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| ID | 4956380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 970008 |
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| End bp | 971693 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640180081 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_001112271 |
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| Protein GI | 134298775 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.69967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATT GGCAAACTAA TCGAGATGAA AATCTAAAGG AAATAAAAGT AACGATTTTT
TTATTGTGCT GTATTGTTTT TGCCTTTGCC TTTTCAATAA AAATTAATTG CAACTTGCCA
GTAAATGAAT CATATAAAGA TATATTTGCT TTTTTTCAAC ATTCATTCAT ATCGTTGTTA
CTATTATTTA TTACTCTAAT AGGCTCTGTA GTGATTGTGC GTTTTAATGT TATTTCTAGA
GGTTCCTTTT TTCTTTCTCT TTTTGTATTT ATATTAATTG CATTGTATCA CGATGACTAC
CTAAAGACTA TTTTAATTAT ACCCGTAGCA TTTGCCTCTT TTACAAGAAG TAAAGAATTT
GGGTGTATTA TTGCAATACT TAGTGGAGTA TTGTTATGTG CTGGGGATTT ATACAAACAT
GGTTATAATT TTCCAAACAG AAATCTAGAA TCAGATATTG TCTTTACCGG CGTCATGTTT
ATCTGTGCAT GGCTTATCGG TGGCATAGCA GGTATTGAAC GGGATACAAG GAATATCCTG
GTGAATTTAG CCAATAAGGA TGGTTTGTCT GAGATTTATA ATCACAGGTA TTTTCATGTG
ACCTTTAAAA AAGCAATAGA AGAAGCAAAG AGTTCCAATA GTCCTCTAAG TCTTTTGATT
ATGGATATAG ATTATTTCAA GTATTATAAT GATGCCTTCG GCCATCTGGC GGGGGATAAT
ATTTTAAAGG ATATCGGCCA AATTCTAAAA CAAAAGGTTG AATATCCCGG AATTGCCGCA
CGCTATGGAG GCGATGAATT TTGTGTTTTA TTACCGGGAT ATGATTCAAA TGTTGCCATA
ATTATTGCCC AAAAATTAAA GGATAGTATT GATCAATATT TTGCGGACAA TGAACAGTTT
AAACAACTAC CCACTGGCAA GTTTAGCATT ACCCTGGGAC TGGCCAGCTA TCCAGAACAT
ACACAAAAGG GAGACGACCT GTTGGAACTG GCTGATCAGG CACTCTACAA AGCGAAAAAA
ACCAGCAAAA ATAAAGTAGA AATATATTTT AACGTTCTTG ATTCTTTAAA GGGAACCTGT
GACCCTTCAG AAAGGGAGGC TCTTAATTCT ACCAAGACGC TGCTTAGCAT TATCAATGCT
AAGGATCGTT ATACCTATGC TCACTCTGAA AGGGTTTTAG ATTATGCAAC GAAGCTAGCG
AAGAAATGTG GCCTCAGCGA TCAGGAGGTT CGTTTAGTGC AATATGGTGC CTACTTGCAT
GATATCGGCA AGATTGAAAT TGATGTAAAT ATTTTGAGCA AAACAGAAAA TCTTACTGAA
CAGGATTGGG AAACCATGAA ACAGCATTCC TATTGGGGTA GTGAAATTAT CCGGCCCATT
AAATCCTTGG AAAAAGTAAG GCCTTATATT CTACACCACC ATGAAAACTT TGATGGCACT
GGCTATCCAA TGGGGATCAA AGGCAACGAT ATTCCACTGG GTGCAAAAAT TATCCGAATT
GTAGACAGTT ATGACGCTAT GACCACAGAC AGGCCCTATA AGAAAGGAAT GTCTTATATA
GATGCCTGCA GCGAAATCAT GAACTTGGCT GGCAAACAGT ATGATCCAGA ACTGAGCAAG
CTATTTGTCC TTCTGGTAGA GTCTGACCCA GAAGGTTTTC ATACATTCTC TACTTTTGAA
CGATAG
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| Protein sequence | MSNWQTNRDE NLKEIKVTIF LLCCIVFAFA FSIKINCNLP VNESYKDIFA FFQHSFISLL
LLFITLIGSV VIVRFNVISR GSFFLSLFVF ILIALYHDDY LKTILIIPVA FASFTRSKEF
GCIIAILSGV LLCAGDLYKH GYNFPNRNLE SDIVFTGVMF ICAWLIGGIA GIERDTRNIL
VNLANKDGLS EIYNHRYFHV TFKKAIEEAK SSNSPLSLLI MDIDYFKYYN DAFGHLAGDN
ILKDIGQILK QKVEYPGIAA RYGGDEFCVL LPGYDSNVAI IIAQKLKDSI DQYFADNEQF
KQLPTGKFSI TLGLASYPEH TQKGDDLLEL ADQALYKAKK TSKNKVEIYF NVLDSLKGTC
DPSEREALNS TKTLLSIINA KDRYTYAHSE RVLDYATKLA KKCGLSDQEV RLVQYGAYLH
DIGKIEIDVN ILSKTENLTE QDWETMKQHS YWGSEIIRPI KSLEKVRPYI LHHHENFDGT
GYPMGIKGND IPLGAKIIRI VDSYDAMTTD RPYKKGMSYI DACSEIMNLA GKQYDPELSK
LFVLLVESDP EGFHTFSTFE R
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