| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_3082 |
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| Symbol | |
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| ID | 8430076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 3275812 |
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| End bp | 3277464 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 645035338 |
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| Product | diguanylate cyclase and metal dependent phosphohydrolase |
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| Protein accession | YP_003192457 |
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| Protein GI | 258516235 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000925788 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAAGT GGCAAAATAA TAGTGATCAT AGGTATATAG GCCTAATCAA TGAAATTTAT
GCTTTTTGTG CAGCTGTTTT TATTACAGCT GTTATATATA AATTTTGGAA TATAAATGAT
TTCCCAAATA TCCATGTAAT GTCAATAATC AAAGAAGTAA TACCTATAAC TGTCTTTTTA
CTAAGTGTGC TGTTTGGTTT TACACTAATA ATAAAATATA GTAACGTATC AGCGGGTATT
TTTATTCTTT CTATATTTAT TTTTATATTT ATCTTTGGAT TCCAGGATAC CCATCTAAAA
ACATTATTAA TAATACCTGT AATTTTATTT GCTTTTACCA GGAATAAAAT TGTTGGTTGT
TTTGTAGCAA TAGCATGTGG TTTGTCATTA GTACTTATTG ATATATATTT TTATAAATAT
GATTACCCAA ACAGAACTTT GGAGTCGGAT ATTATTTTTA CCGGTGTTAT GTTAATTAGT
GCGTGGCTTA CCGGAGGAAT AACAAGCATA GAGCGAGAAA TCAGAGAGCA TTTGATTGAT
ATGGCTAACC GGGATGGTCT TACCGGCTTG TATAACCACA GGTTCTTACA AGAATACTTT
AAGACTCTTT CAGAAGAGAC AAACAACACC GTTAGAAATA TAAGTCTTAT ACTTTTTGAT
ATAGATCACT TTAAATACTT TAACGATACT TTTGGTCATA CCGCCGGTGA TGAAATTTTA
TTAAATGTAA GTAATATAGT AAAAAATCAT ATTAGTTATC CTTCTATTGT AGCCAGATAT
GGTGGAGATG AATTTTGTAT TTTATTAATT GATTATGATT TATCTTCTGC CTATAAATTA
GCAAGTGAAA TGTCTGAAAA GGTAGAACAA CTGGTTATTA AAAATACCGA AAAATTACCC
AATGGAAAGA TATCAATTAC TGCGGGAATA GCAAATTATC CGAGCCATAC AAAACATTGT
GAAAAATTAA TAGATCTTGC CGATCAGGCT CTCTACAAAG CCAAAAAAAC CAGCAAAAAT
AAAGTCGAAC TGTATTTTAA CGTCTTAGAT TCTCTTAATA CCAGCAATCC AACAGAACTT
GAGCTGTTAA GTTCGATCAA AACACTTTTA AGTATAATAA ATGCCAAGGA TCGCTATACC
TACGGGCACT CAGAACGAGT ACTTGAATAT TCTACATTAT TGGCACAAAA ATATGGACTG
CCAGAAGAAG AAATCAGGTT AATCGAATAC GGCGCTTACC TTCACGATAT AGGAAAAATT
GAAGTTGATA TTGAAGTACT TAACTCTTCG GGCAAACCTA CTGAGAGAGA GTGGGAAATA
TTAAAACAGC ATCCCTATTG GGGCAGCGAA ATTATCAAGC CTATTAAATC ACTGGAAAAA
GTAGGCCCGT ATATCTTGTA TCACCATGAG AATTATAACG GAACAGGCTA TCCCAGCGGC
TTAAAGGATA CATCCATACC ACTGGGAGCC AGAATAATCC GTATAGCCGA CAGTTTTGAC
GCTATAACCA CCGACCGGCC TTATAAAAAA GGAAAGACTC AGGAAGAAGC ATGTGAAGAA
ATTCTGTCTC TGGCCGGTGC ACATTATGAT CCCGTACTGA GTAAGATTTT TGTTAAAGCA
ATGAGAGAGG AATATATTTT AAAAGGCAAA TAG
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| Protein sequence | MNKWQNNSDH RYIGLINEIY AFCAAVFITA VIYKFWNIND FPNIHVMSII KEVIPITVFL
LSVLFGFTLI IKYSNVSAGI FILSIFIFIF IFGFQDTHLK TLLIIPVILF AFTRNKIVGC
FVAIACGLSL VLIDIYFYKY DYPNRTLESD IIFTGVMLIS AWLTGGITSI EREIREHLID
MANRDGLTGL YNHRFLQEYF KTLSEETNNT VRNISLILFD IDHFKYFNDT FGHTAGDEIL
LNVSNIVKNH ISYPSIVARY GGDEFCILLI DYDLSSAYKL ASEMSEKVEQ LVIKNTEKLP
NGKISITAGI ANYPSHTKHC EKLIDLADQA LYKAKKTSKN KVELYFNVLD SLNTSNPTEL
ELLSSIKTLL SIINAKDRYT YGHSERVLEY STLLAQKYGL PEEEIRLIEY GAYLHDIGKI
EVDIEVLNSS GKPTEREWEI LKQHPYWGSE IIKPIKSLEK VGPYILYHHE NYNGTGYPSG
LKDTSIPLGA RIIRIADSFD AITTDRPYKK GKTQEEACEE ILSLAGAHYD PVLSKIFVKA
MREEYILKGK
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