| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0417 |
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| Symbol | |
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| ID | 6027601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 457674 |
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| End bp | 460235 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641593259 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001716597 |
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| Protein GI | 169830615 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACACTCC GGAAAAAGAC CCTGATGATT ACGGGGGCGA TGCTCCTTGG CCTGCTGGTC
GTGTTGTATA CAGCCGCCCA CTTGATCCTC CTGAGTAGTT TCCTGGACCT GGAAAGGGCC
AGGACACACG ACTACACCGA GCAAGTGCTG AGTCTCGTCA CGGCCCAACT GGACGAACTC
AGCAGCGGGG TCGGCGACTG GGCCGCGTGG GACGAGACCT ACGCCTTCAT CGTGACCGGC
GATCCCGAGT ATGTGCGCCG GAACATCCCC GATGCCACTT TTGAGGAGCT CAGGCTGAAC
CTGATGCTTT TTGCCGATGC TTCCGGCCGG GTGGTCTTCG GCCGGGCCTT TGACCTGCGG
CGCGGACAGG AAATGCCGGT ACCCGGAAGT CTTACGCCCC ACCTTGAGAG CGGCAGTCCC
CTGCTGGGCC ATTCCGACCC GGAGAGCAGC GTCACCGGGG TGGTCCTTCT GCCGGAAGGG
CCGTTGTTGG TGGCTTCGCG CCCCATCCTG ACCAATGAAA GGCAGGGCCC GGTCCGGGGG
TCGCTGGTCT GGGGCCGGTT TTTGGACGAT CAGGAAGTTG CGCGTTTGTC CGAAGTGACG
CACCTGGATC TCTCTGTGCG CCGCGTGGAT GACCCGGAAC CACCCGCTGA CTTTGAGGCG
GCGCGCGCCC TTTTGTCCCA CGAGGTACCC ATCGTCACCC GGCCGGTGAG CAGTGAATCC
GTTGCGGGAT ACGCGCTGCT GGAGGACATC TACGGCGACC CCGCGCTCAT CTTGAAAGTG
GACCGTCCGC GGTTGATCTA CAAACAGGGC CTGGCTACCA TCAACTTCTT TGCCTGGTCT
CTCGTGGCAG GCGGCCTGGT AATCGTCGTG GGCACAATGT TGCTCCTGAA GAGCCTGATT
CTGTCCCGGT TGGAGCACTT AAACGACAGG GTTGAAGAGA TCGGCAGAAG CGGCGACCTT
TCGGCGCGCG TTGCGATTCC CGGAGATGAC GAACTGTCGA ACCTGGCCGG GGCCATCAAC
CGGATGCTGA CGACCTTGGA GCAGTCCGGC CGCAAACTGC AAGAGAGCGA AGAGCTTTAC
CGCAGTCTGG CGGAAAGGCT CCAAACCGCA CACCAGCAAT TGCAGGACAT CATCGAGTTT
TTGCCGGACG CCACCTTTGT CGTCGACCGG GATAAGCGGG TGATTGCCTG GAACCTGGCC
ACCGAAAGAA TGACGGGGGT TTCAAAGGCC GAGATTCTCG GCAAGGGTGA CTATGCCTAC
GCCGTACCCT TCTACGGGCG GCCGCGACCC ATGCTGGTCG ATCTCGTGGT AGGGGGGGAC
CCGGGGGTTG AGTGGCAGTA CCAGGGATTC GAGATCAAAG GCAACACCTA CTACGCCGAG
GGTTTCGTTC CTTCCGTCTA CGAGGGGCGG GGCGCTTTCG TCTGGGAGAA GGCCTCGCCG
CTTTTTGACA GTCAGGGGAA TATGGCGGGG GCGGTCGAAA CCATTCGCGA TGTGAGCGAG
CGCAAGGAGG CAGAGGAACG GCTCAGATAC CTGAGCCTGC ATGATCCGCT CACCGGGATC
TACAACCGGG CCTACTTCGA GGAGGAAATG CGGCGCCTGG CGGGCGGACG CTTCGCACCG
GTGAGCCTCA TCGTGTGTGA CGTGGATGGA CTCAAGCTGG TCAACGACAG TCTGGGACAC
GAAACCGGAG ATGCGCTGCT CAGGGCGGCC GCCGGGGTTC TGCAGCAGGC TTTCCGCGAA
AGTGACGTGG TGGCCCGGGT GGGGGGAGAC GAGTTCGCCG TAGTGCTGCC GGAGAGCGAC
AAAACGGTGG TCCAGGGTGC CTGTCAACGA ATCCGGGAGG CCGTGGAGCG CCACAACCTG
CTCCATCCGG AACTTCCTTT GAGTCTGTCC GTTGGTTTCG CGGTCACCAA CGAAGACACC
GGCAGCCTGA ACGATTTGTT CCGGGAAGCC GACAACAACA TGTACCGGGA AAAGCTGCAC
CGCAGCCAGA GTTCGCGCAG CGCGATCGTC CAGGCCTTGA TGCAGACCCT GAAAGCCAGG
GACTACATCA CCGAGGGGCA CGGAGACCGC TTGCAGGACC TGGTCCTGCG CATGGCCGAG
GCTCTTGGCC TGCCTGAGCG CACGGTCGGC AACCTGCGCC TGCTGGCCCA GTTTCACGAC
ATCGGCAAGG TGGGCATTCC CGACCGCATC CTGTTCAAGA AGGGGCCCCT CACCCCGGCG
GAAAGGTCCG AAATGCAGCG GCACTGTGAG ATCGGCCACC GCATCGCCCA TTCCGTCCCG
GACCTGGTGC ACATCGCCGA TCTGATTCTC AAACACCACG AGGCATGGGA CGGGGAGGGC
TACCCCCTGG GGCTCAAAGG TGAGGAGATC CCCCTGGAGT GCCGCATTCT GGCCATTGCC
GACGCCTACG ACTCCATGAC CAACGACCGC CCCTACCGGA AGGCGCTGTC ACACGCGGAA
GCGATTGCCG AGCTGGAACG GTGTGCCGGC ACGCAGTTCG ACCCCGAACT GGTGCGGCTG
TTCGTGGAAA TCCTGCAGTC TTCAGCGGCA AGTACGGCGT AA
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| Protein sequence | MTLRKKTLMI TGAMLLGLLV VLYTAAHLIL LSSFLDLERA RTHDYTEQVL SLVTAQLDEL
SSGVGDWAAW DETYAFIVTG DPEYVRRNIP DATFEELRLN LMLFADASGR VVFGRAFDLR
RGQEMPVPGS LTPHLESGSP LLGHSDPESS VTGVVLLPEG PLLVASRPIL TNERQGPVRG
SLVWGRFLDD QEVARLSEVT HLDLSVRRVD DPEPPADFEA ARALLSHEVP IVTRPVSSES
VAGYALLEDI YGDPALILKV DRPRLIYKQG LATINFFAWS LVAGGLVIVV GTMLLLKSLI
LSRLEHLNDR VEEIGRSGDL SARVAIPGDD ELSNLAGAIN RMLTTLEQSG RKLQESEELY
RSLAERLQTA HQQLQDIIEF LPDATFVVDR DKRVIAWNLA TERMTGVSKA EILGKGDYAY
AVPFYGRPRP MLVDLVVGGD PGVEWQYQGF EIKGNTYYAE GFVPSVYEGR GAFVWEKASP
LFDSQGNMAG AVETIRDVSE RKEAEERLRY LSLHDPLTGI YNRAYFEEEM RRLAGGRFAP
VSLIVCDVDG LKLVNDSLGH ETGDALLRAA AGVLQQAFRE SDVVARVGGD EFAVVLPESD
KTVVQGACQR IREAVERHNL LHPELPLSLS VGFAVTNEDT GSLNDLFREA DNNMYREKLH
RSQSSRSAIV QALMQTLKAR DYITEGHGDR LQDLVLRMAE ALGLPERTVG NLRLLAQFHD
IGKVGIPDRI LFKKGPLTPA ERSEMQRHCE IGHRIAHSVP DLVHIADLIL KHHEAWDGEG
YPLGLKGEEI PLECRILAIA DAYDSMTNDR PYRKALSHAE AIAELERCAG TQFDPELVRL
FVEILQSSAA STA
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