More than 300 homologs were found in PanDaTox collection
for query gene Tpau_0999 on replicon NC_014158
Organism: Tsukamurella paurometabola DSM 20162



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014158  Tpau_0999  binding-protein-dependent transport systems inner membrane component  100 
 
 
314 aa  632  1e-180  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0270666  n/a   
 
 
-
 
NC_014211  Ndas_4908  binding-protein-dependent transport systems inner membrane component  58.65 
 
 
299 aa  338  5e-92  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3467  binding-protein-dependent transport systems inner membrane component  58.33 
 
 
305 aa  325  8.000000000000001e-88  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3171  binding-protein-dependent transport systems inner membrane component  45.69 
 
 
307 aa  293  2e-78  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.586554 
 
 
-
 
NC_008541  Arth_3381  binding-protein-dependent transport systems inner membrane component  46.64 
 
 
304 aa  287  1e-76  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0614  binding-protein-dependent transport systems inner membrane component  52.14 
 
 
286 aa  284  1.0000000000000001e-75  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7920  binding-protein-dependent transport systems inner membrane component  48.92 
 
 
303 aa  264  1e-69  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.873498  normal 
 
 
-
 
NC_011899  Hore_20500  Monosaccharide-transporting ATPase  39.71 
 
 
291 aa  214  1.9999999999999998e-54  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00337016  n/a   
 
 
-
 
NC_008709  Ping_2009  ABC sugar transporter inner membrane binding protein  38.43 
 
 
283 aa  192  6e-48  Psychromonas ingrahamii 37  Bacteria  normal  0.815195  normal 
 
 
-
 
NC_010622  Bphy_2349  binding-protein-dependent transport systems inner membrane component  39.19 
 
 
283 aa  189  5.999999999999999e-47  Burkholderia phymatum STM815  Bacteria  normal  0.823442  normal  0.0985455 
 
 
-
 
NC_008061  Bcen_5199  binding-protein-dependent transport systems inner membrane component  39.56 
 
 
283 aa  188  1e-46  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5660  binding-protein-dependent transport systems inner membrane component  39.56 
 
 
283 aa  188  1e-46  Burkholderia cenocepacia HI2424  Bacteria  normal  0.674911  normal  0.328487 
 
 
-
 
NC_010557  BamMC406_6026  binding-protein-dependent transport systems inner membrane component  38.97 
 
 
283 aa  187  1e-46  Burkholderia ambifaria MC40-6  Bacteria  normal  0.548734  normal  0.778236 
 
 
-
 
NC_010676  Bphyt_4588  binding-protein-dependent transport systems inner membrane component  39.56 
 
 
283 aa  188  1e-46  Burkholderia phytofirmans PsJN  Bacteria  normal  0.165576  normal 
 
 
-
 
NC_010515  Bcenmc03_4575  binding-protein-dependent transport systems inner membrane component  39.71 
 
 
283 aa  187  2e-46  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0133607 
 
 
-
 
NC_008392  Bamb_6326  binding-protein-dependent transport systems inner membrane component  38.97 
 
 
283 aa  187  2e-46  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2393  binding-protein-dependent transport systems inner membrane component  40.67 
 
 
289 aa  186  3e-46  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3194  binding-protein-dependent transport systems inner membrane component  39.34 
 
 
283 aa  185  8e-46  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.13099 
 
 
-
 
NC_008391  Bamb_4934  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
283 aa  184  1.0000000000000001e-45  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.102877 
 
 
-
 
NC_010552  BamMC406_5489  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
283 aa  184  1.0000000000000001e-45  Burkholderia ambifaria MC40-6  Bacteria  normal  0.602642  hitchhiker  0.000196491 
 
 
-
 
NC_008061  Bcen_4878  binding-protein-dependent transport systems inner membrane component  38.24 
 
 
283 aa  181  1e-44  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_3287  binding-protein-dependent transport systems inner membrane component  38.24 
 
 
283 aa  181  1e-44  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_008043  TM1040_3485  binding-protein-dependent transport systems inner membrane component  36.58 
 
 
282 aa  181  2e-44  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2325  binding-protein-dependent transport systems inner membrane component  38.18 
 
 
283 aa  180  2.9999999999999997e-44  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3836  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
283 aa  179  4e-44  Jannaschia sp. CCS1  Bacteria  normal  0.253658  normal 
 
 
-
 
NC_009718  Fnod_0628  binding-protein-dependent transport systems inner membrane component  35.49 
 
 
280 aa  177  2e-43  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.00114056  n/a   
 
 
-
 
NC_009654  Mmwyl1_2010  binding-protein-dependent transport systems inner membrane component  37.93 
 
 
283 aa  176  5e-43  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5739  ABC transporter membrane spanning protein  38.74 
 
 
284 aa  175  8e-43  Agrobacterium vitis S4  Bacteria  normal  0.0642134  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1182  ABC transporter, permease protein  37.5 
 
 
283 aa  174  9.999999999999999e-43  Burkholderia pseudomallei 1710b  Bacteria  normal  0.134405  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2816  putative carbohydrate ABC transporter, permease protein  37.07 
 
 
283 aa  174  9.999999999999999e-43  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2650  binding-protein-dependent transport systems inner membrane component  37.88 
 
 
283 aa  173  2.9999999999999996e-42  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.275  normal 
 
 
-
 
NC_012669  Bcav_0942  binding-protein-dependent transport systems inner membrane component  39.48 
 
 
292 aa  173  2.9999999999999996e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.72479 
 
 
-
 
NC_009952  Dshi_1246  binding-protein-dependent transport systems inner membrane component  35.18 
 
 
282 aa  173  3.9999999999999995e-42  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.87004 
 
 
-
 
NC_011368  Rleg2_4664  binding-protein-dependent transport systems inner membrane component  38.75 
 
 
294 aa  173  3.9999999999999995e-42  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.829969 
 
 
-
 
NC_012848  Rleg_4749  binding-protein-dependent transport systems inner membrane component  36 
 
 
294 aa  169  4e-41  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.377096 
 
 
-
 
NC_008148  Rxyl_0623  binding-protein-dependent transport systems inner membrane component  35.76 
 
 
285 aa  152  7e-36  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.587185  n/a   
 
 
-
 
NC_013530  Xcel_3235  binding-protein-dependent transport systems inner membrane component  31.35 
 
 
315 aa  140  3e-32  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.628431  n/a   
 
 
-
 
NC_013172  Bfae_23830  ABC-type sugar transport system, permease component  30.35 
 
 
303 aa  140  3.9999999999999997e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_2236  binding-protein-dependent transport systems inner membrane component  31.71 
 
 
326 aa  139  7e-32  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_013517  Sterm_4035  binding-protein-dependent transport systems inner membrane component  28.42 
 
 
275 aa  138  1e-31  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_13120  binding-protein-dependent transport systems inner membrane component  27.7 
 
 
281 aa  138  2e-31  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_07090  carbohydrate ABC transporter membrane protein  31.49 
 
 
297 aa  137  2e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.484771  normal 
 
 
-
 
NC_013521  Sked_01770  carbohydrate ABC transporter membrane protein  28.71 
 
 
315 aa  134  1.9999999999999998e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.474975  normal 
 
 
-
 
NC_012669  Bcav_3994  binding-protein-dependent transport systems inner membrane component  28.9 
 
 
303 aa  134  1.9999999999999998e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.947348 
 
 
-
 
NC_008709  Ping_2510  ABC sugar transporter inner membrane binding protein  28.47 
 
 
278 aa  132  6e-30  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.686515 
 
 
-
 
NC_010320  Teth514_1093  binding-protein-dependent transport systems inner membrane component  32.76 
 
 
270 aa  132  6e-30  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2628  binding-protein-dependent transport systems inner membrane component  31.48 
 
 
303 aa  132  7.999999999999999e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.11213  normal 
 
 
-
 
NC_013521  Sked_02950  carbohydrate ABC transporter membrane protein  28.62 
 
 
297 aa  131  1.0000000000000001e-29  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0801  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
290 aa  131  1.0000000000000001e-29  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.412321 
 
 
-
 
NC_013172  Bfae_29880  carbohydrate ABC transporter membrane protein  32.47 
 
 
304 aa  131  2.0000000000000002e-29  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0188  binding-protein-dependent transport systems inner membrane component  31.87 
 
 
277 aa  130  3e-29  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3860  binding-protein-dependent transport systems inner membrane component  28.73 
 
 
291 aa  130  4.0000000000000003e-29  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2785  binding-protein-dependent transport systems inner membrane component  30 
 
 
296 aa  129  5.0000000000000004e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.391762  normal 
 
 
-
 
NC_012669  Bcav_0017  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
300 aa  129  9.000000000000001e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.385749  normal 
 
 
-
 
NC_013235  Namu_5150  binding-protein-dependent transport systems inner membrane component  30.23 
 
 
313 aa  128  1.0000000000000001e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1806  binding-protein-dependent transport systems inner membrane component  30.88 
 
 
280 aa  128  1.0000000000000001e-28  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3180  binding-protein-dependent transport systems inner membrane component  32.73 
 
 
307 aa  128  1.0000000000000001e-28  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0466415 
 
 
-
 
NC_013517  Sterm_4048  binding-protein-dependent transport systems inner membrane component  29.01 
 
 
287 aa  126  4.0000000000000003e-28  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1945  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
271 aa  125  7e-28  Arthrobacter sp. FB24  Bacteria  normal  0.232263  n/a   
 
 
-
 
NC_013174  Jden_0269  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
307 aa  125  7e-28  Jonesia denitrificans DSM 20603  Bacteria  normal  0.402719  normal  0.159625 
 
 
-
 
NC_008698  Tpen_1590  binding-protein-dependent transport systems inner membrane component  30.38 
 
 
279 aa  125  7e-28  Thermofilum pendens Hrk 5  Archaea  normal  0.0602936  n/a   
 
 
-
 
NC_010003  Pmob_0029  binding-protein-dependent transport systems inner membrane component  30.27 
 
 
283 aa  125  9e-28  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000511748  n/a   
 
 
-
 
NC_014210  Ndas_1083  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
301 aa  125  9e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.521844  normal  0.416861 
 
 
-
 
NC_013131  Caci_3721  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
276 aa  125  1e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.456795  normal  0.243897 
 
 
-
 
NC_009380  Strop_2981  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
319 aa  125  1e-27  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0908171 
 
 
-
 
NC_013525  Tter_1289  binding-protein-dependent transport systems inner membrane component  29.45 
 
 
271 aa  124  1e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_20610  binding-protein-dependent transport systems inner membrane component  31.1 
 
 
273 aa  124  1e-27  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_3205  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
319 aa  125  1e-27  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.450418 
 
 
-
 
NC_013131  Caci_3806  binding-protein-dependent transport systems inner membrane component  31.29 
 
 
300 aa  124  2e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8234  maltose transport protein  27.9 
 
 
271 aa  124  2e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.367769  normal 
 
 
-
 
NC_013525  Tter_0206  binding-protein-dependent transport systems inner membrane component  28.21 
 
 
281 aa  124  2e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_004116  SAG0036  sugar ABC transporter, permease protein  29.07 
 
 
276 aa  123  3e-27  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.385725  n/a   
 
 
-
 
NC_013174  Jden_1757  binding-protein-dependent transport systems inner membrane component  29.03 
 
 
273 aa  123  3e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  0.354113  normal  0.0704722 
 
 
-
 
NC_013172  Bfae_00860  ABC-type sugar transport system, permease component  30.82 
 
 
267 aa  123  4e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29430  ABC-type sugar transport system, permease component  32.02 
 
 
298 aa  123  4e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_1864  binding-protein-dependent transport systems inner membrane component  32.62 
 
 
302 aa  123  4e-27  Arthrobacter sp. FB24  Bacteria  normal  0.0751871  n/a   
 
 
-
 
NC_014210  Ndas_2035  binding-protein-dependent transport systems inner membrane component  29.07 
 
 
291 aa  123  4e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0974901  normal  0.381629 
 
 
-
 
NC_013131  Caci_1939  binding-protein-dependent transport systems inner membrane component  29.39 
 
 
314 aa  122  5e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0503026  normal  0.979613 
 
 
-
 
NC_011886  Achl_0497  binding-protein-dependent transport systems inner membrane component  31.06 
 
 
306 aa  122  5e-27  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000825086 
 
 
-
 
NC_008699  Noca_0043  binding-protein-dependent transport systems inner membrane component  30.67 
 
 
290 aa  122  6e-27  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4452  binding-protein-dependent transport systems inner membrane component  27.8 
 
 
274 aa  122  7e-27  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7514  binding-protein-dependent transport systems inner membrane component  32.34 
 
 
277 aa  122  9e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29400  carbohydrate ABC transporter membrane protein  29.37 
 
 
305 aa  122  9e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  0.709644  n/a   
 
 
-
 
NC_011898  Ccel_1027  binding-protein-dependent transport systems inner membrane component  32.76 
 
 
279 aa  122  9.999999999999999e-27  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.006727  n/a   
 
 
-
 
NC_013411  GYMC61_2714  binding-protein-dependent transport systems inner membrane component  29.04 
 
 
288 aa  121  9.999999999999999e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009664  Krad_2142  binding-protein-dependent transport systems inner membrane component  29.47 
 
 
293 aa  121  9.999999999999999e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0560  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
292 aa  120  1.9999999999999998e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.843262 
 
 
-
 
NC_007494  RSP_3672  ABC sugar transporter, inner membrane subunit  28.42 
 
 
277 aa  120  1.9999999999999998e-26  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.191343  n/a   
 
 
-
 
NC_011898  Ccel_0202  binding-protein-dependent transport systems inner membrane component  26.71 
 
 
284 aa  120  1.9999999999999998e-26  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1308  binding-protein-dependent transport systems inner membrane component  27.99 
 
 
277 aa  121  1.9999999999999998e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7904  binding-protein-dependent transport systems inner membrane component  29.39 
 
 
271 aa  121  1.9999999999999998e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0294  ABC sugar transporter, inner membrane subunit  28.68 
 
 
278 aa  121  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0963  binding-protein-dependent transport systems inner membrane component  27.78 
 
 
302 aa  121  1.9999999999999998e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.341564  decreased coverage  0.00499995 
 
 
-
 
NC_013595  Sros_7164  binding-protein-dependent transport systems inner membrane component  29.7 
 
 
316 aa  120  3e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0221214 
 
 
-
 
NC_013745  Htur_4500  binding-protein-dependent transport systems inner membrane component  32.37 
 
 
310 aa  120  3e-26  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.252807  n/a   
 
 
-
 
NC_009050  Rsph17029_3407  binding-protein-dependent transport systems inner membrane component  28.06 
 
 
277 aa  120  3e-26  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.353789  normal  0.790416 
 
 
-
 
NC_013515  Smon_1044  binding-protein-dependent transport systems inner membrane component  28.98 
 
 
277 aa  120  3e-26  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013947  Snas_4650  binding-protein-dependent transport systems inner membrane component  31.17 
 
 
314 aa  120  3e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  decreased coverage  0.000243743 
 
 
-
 
NC_011898  Ccel_1000  binding-protein-dependent transport systems inner membrane component  29.37 
 
 
279 aa  120  3e-26  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2681  Monosaccharide-transporting ATPase  30.27 
 
 
278 aa  120  3.9999999999999996e-26  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.515759  normal 
 
 
-
 
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